New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1910819 =	41 (1.030)	3 (0.080)	3/252	NT	7.1%	coding (544/1374 nt)	yebQ	putative transporter YebQ
	?	NC_000913	1910839 =	39 (1.020)					coding (564/1374 nt)	yebQ	putative transporter YebQ

GGATGGGCATAAACTCGTTTATTGTTGCCGTCTCTTCTGCTGCCGGGCCGACAATTGCTGCAGCAATCCTCTCCATCGCATCCTGGAAATGGTTATTTTTAATCAACGTACCGTTAGGTATTATCGCCCTGCTTCTGGCGATGCGTTTTCTGCCACCCAATGGTTCTCGCGCCAGTAAACCCCGTTTCGACCTGCCCAGCGCCGTGATGAACGCGTTAACCTTCGGCCTGCTTATCACTGCGTTGAGTGGTTTCGCTCAGGGGCAATCGCTGACGTTAATTGC  >  NC_000913/1910697‑1910979                                                                                                                                               |                                                                                                                                             ggATGGGCATAAACTCGTTTATTGTTGCCGTCTCTTCTGCTGCCGGGCCGACAATTGCTGCAGCAATCCTCTCCATCGCATCCTGGAAATGGTTATTTTTAATCAACGTACCGTTAGGTATTATCACCCTTCTTCTGGCGATg                                                                                                                                              >  2:512184/1‑143 (MQ=255)   cccggagcgaaaccagtcacggcagtgataagcaggccgaaggttaacgcgttcatcacggcgctgggcaggtcgaaacggggtttactggcgcgagaaccattgggtggcagaaaacgcATCGCCCTGCTTCTGGCGATGCg                                                                                                                                            >  2:264784‑M1/121‑143 (MQ=255)          tAAACTCGTTTATTGTTGCCGTCTCTTCTGCTGCCGGGCCGACAATTGCTGCAGCAATCCTCTCCATCGTTTCTTGGAAATGGTTATTTTTAATCAACGTACCGTTAGGTATTATCGCCCTGCTTCTGGCGATGCGTTTTCTg                                                                                                                                     <  1:403459/143‑1 (MQ=255)           aaaCTCGTTTATTGTTGCCGTCTCTTCTGCTGCCGGGCCGACAATTGCTGCAGCAATCCTCTCCATCGCAGCCTGGAAATGGTTATTTTTAATCAACGTACCGTTAGGTATTATCGCCCTGCTTCCGGCGATGCGtttcccgc                                                                                                                                    >  2:358245/1‑138 (MQ=255)               tCGTTTATTGTTGCCGTCTCTTCTGCTGCCGGGCCGACAATTGCTGCAGCAATCCTCTCCATCGCATCCTGGAAATGGTTATTTTTAATCAACGTACCGTTAGGTATTATCGCCCTGCTTCTGGCGATGCGTTTTCTGCGAcc                                                                                                                                >  1:251026/1‑143 (MQ=255)                  tttATTGTTGCCGTCTCTTCTGCTGCCGGGCCGACAATTGCTGCAGCAATCCTCTCCATCGCATCCTGGAAATGGTTATTTTTAATCAACGTACCGTTAGGTATTATCGCCCTGCTTCTGGCGCTGCCGGTGCTGCCACCCaa                                                                                                                             >  2:399181/1‑143 (MQ=255)                    tATTGTTGCGGTCTCCTCTGCTGCCGGGCCGACAATTGCTGCAGCAATCCTCTCCATCGCATCCTGGAAATGGTTATTTTTAATCAACGTACCGTTAGGTATTATCGCCCTGCTTCTGGCGATGCGTTTTCTGCCACCCAATg                                                                                                                           <  1:697139/143‑1 (MQ=255)                    tATTGTTGCCGTCTCTTCTGGTGCCGGGCCGACAATTGCTGCAGCAATCCTCTCCATCGCATCCTGGAAATGGTTATTTTTAATCAACGTACCGTTAGGTATTATCGCCCTGCTTCTGGCGATGCGTTTTCTGCCACCCAATg                                                                                                                           <  1:639134/143‑1 (MQ=255)                     aTTGGTGCCGCCTCTTCTGCTGCCGGGCCGACAATTGCGGCAGCAATCCTCTCCATCCCACCGCGCTAATTGTTATTTTTAATCAACGTACCGTTAGGTATTATCGCCCTGCTTCTGGCGATGCGTTTTCTGCCACCCAATgg                                                                                                                          <  1:574890/143‑1 (MQ=255)                      ttgttgCCGTCTCTTCTGCTGCCGGGCCGACAATTGCTGCAGCAATCCTCTCCATCGCATCCTGGAAGTGGTTATTTTTAATCAACGTACCGTTATGTATTATCGCCCTGCTTCTGGCGATGACATTAATGCCACCCAACGGt                                                                                                                         >  1:453252/1‑143 (MQ=255)                      ttgttgCCGTCTCTTCTGCTGCCGGGCCGAAAATTGCTGCAGCAATCCTCTCCATCGCATCCTGCAAATGGTTAGTTTTAATCAACGTACCGTTAGGTATTATCGCCCTGCTTCTAGCGATGCGTTTTCTCGCAGACAATggg                                                                                                                         >  1:167775/1‑142 (MQ=255)                       cgcagtgataagcaggccgaaggttaacgcgttcatcacggcgctgggcaggtcgaaacggggtttactggcgcgagaaccattgggtggcagaaaacgcATCGCCCTGCTTCTGGCGATGCGTTTTCTGCCACCCAATg                                                                                                                           <  1:12065‑M1/40‑1 (MQ=255)                       cgcagtgataagcaggccgaaggttaacgcgttcatcacggcgctgggcaggtcgaaacggggtttactggcgcgagaaccattgggtggcagaaaacgcATCGCCCTGCTTCTGGCGATGCGTTTTCTGCCACCCAATg                                                                                                                           >  2:12065‑M1/101‑140 (MQ=255)                          tgCCGTCTCTTCTGCTGCCGGGCCGACAATTGCTGCAGCAATCCTCTCCATCGCATCCTGGAAATGGCTATACGTACTCAACGTACCGTTAGGTATTATCGCCCTGCTCCTGGCGACGCGTTTTCTGCCACCCAATGGCtctc                                                                                                                     >  2:381479/1‑143 (MQ=255)                          gcccGTCTCTTCTGCTGCCGGGCCGACAATTGCTGCAGCAATCCTCTCCCTCGCATCCTGGAAATGGTTATTTTTAATCAACGTACCGTTAGGTATTATCGCCCTGCTTCTGGCGATGCGTTTTCTGCCACCCAATGGTtctc                                                                                                                     <  1:243947/141‑1 (MQ=255)                                 tcttctGCTGCCGGGCCGACAATTGCTGCAGCAATCCTCTCCATCGCATCCTGGAAATGGTTATTTTTAATCAACGTACCGTTAGGTATTATCGCCCTGCTTCTGGCGATGCGTTTTCTGCCACCCAATGGTTCTCGCGCCAg                                                                                                              >  1:548030/1‑143 (MQ=255)                                           gggggCCGCGAATTGCGGTAGCAATCCCCCCCATCGCATCCTGGAAATGGTTATTTTTAATCAACGTACCGTTAGGTATTATCGCCCTGCTTCTGGCGATGCGTTTTCTGCCACCCAATGGTTCTCGCGCCAGTAAACCCCGt                                                                                                    <  2:533325/141‑1 (MQ=255)                                           ccGGGCCGACAATTGCTGCAGCAATCCTCTCCATCGCATCCTGGAAATGGTTATTTTTAATCAACGTACCGTTAGGTATTATCGCCCTGCTTCTGGCGCTGCGTTTTCTGCCACCCAATGGTTCTCGCGCCACTAAGCCCCGt                                                                                                    >  1:5235/1‑143 (MQ=255)                                                ccGACCATTGCTGCAGCAATCCTCTCCATCGCTTCCTGGACATTGTTATTTTTAATCAACGTACCGTTAGGTATTATCGCCCTGCTTCTGGCGATGCGTGTTCTGCCACCCAATGGTTCTCGCGCCAGTAAACCCCGTTTCGa                                                                                               <  2:323297/143‑1 (MQ=255)                                                 cgtcAACTGCTGCTGCAGACCTCGCCGTCGCATCCTGGAAATGGTTATTTTTAATCGACGTACCGTTAGGTATTATCGCCCTGCTTCTGGCGATGCGTTTTCTGCCACCCAATGGTTCTCGCGCCAGTAAACCCCGTTTCGAc                                                                                              <  2:190427/140‑1 (MQ=255)                                                 cGACAATTGCTGCAGCAATCCTCTCCATCGCATCCTGGAAATGGTTATTTTTAATCAACGTACCGTTCGGTATTATCGCCCTGCTTCTGGCGATGCGTTTTCTGCCACCCACTGGTTCTCGCGCCAGTCAACCCCGTTTCgcc                                                                                              >  1:239848/1‑141 (MQ=255)                                                 cGACAATTGCTGCAGCAATCCTCTCCATCGCATCCTGGAAATGGGTATTGTTAATCAACGTACCGGTAGGTATTATCGCCCTGCTTCTGGCGATGCGTTTTCTGCCACCCAATGGTTCTCCCGCCAGCAAACCCCCTTTTGAc                                                                                              >  1:317747/1‑143 (MQ=255)                                                   aCAATTGCTGCAGCAATCCTCTCCATCGCATCCTGGAAATGGTTATTTTTAATCAACGTACCGATAGGTATTCTCGCCCTGCTTCTGGCGATCCGCTGTCTGCCACCCAATGGTTCTCCCGCCGGTAAGCCCCGTATCCACCt                                                                                            >  2:143796/1‑143 (MQ=255)                                                     gaTTGCTGCAGCAATCCTCTCCATCGCATCCTGGAAATGGTTATTTTTAATCAACGTACCGTTAGGTATTATCGCCCTGCTTCTGGCGATGCGTTTTCTGCCACCCAATGGTTCTCGCGCCAGTCAACCGCGGCTCGCCCTGc                                                                                          >  2:555900/2‑143 (MQ=255)                                                                caATCCTCTCCACCACAAACAGGAAATGGGTATTTTTAATCAACGTACCGTTAGGCATTATCGCCCTGCTTCTGGCGATGCGTTTTCTGGCACCCAATGGTTCTCGCGCCAGTAAACCCCGTTTCGACCTGCCCAGCGCCGtg                                                                               <  1:140720/143‑1 (MQ=255)                                                                  aTCCTCTCCATCGCATCCTGGAAATGGTTATTTTTAATCAACGTACCGTTAGGTATTATCGCCCTGCTTCTGGCGATGCGTTTTCTGCCACCCAATGGTTCTCGCGCCAGTAAACCCCGTTTCGACCTGCCCAGCGCCGtgat                                                                             >  1:471417/1‑143 (MQ=255)                                                                      tctcCATCGCATCCTGGAAATGGTTATTTTTAATCAACGTACCGTTAGGTATTATCGCCCTGCTTCTGGCGCTGCGTTTTCTGCCAAAAAAAGCATGTGGGGCCAGTAAACCCCGTTTCCACCTGCCCAGCGCCGTGATGAAc                                                                         >  1:330539/1‑143 (MQ=255)                                                                         ccATCGCATCCTGGAAATGGTTATTTTTAATCAACGTACCGTTAGGTATTATCGCCCTGCTTCTGGCGATGCGTTTTCTGCCACCCAATGGTTCTCGCGCCAGTAAACCCCGTTTCGACCTGCCCAGCGCAGTGATGAAcgcg                                                                      >  1:486444/1‑143 (MQ=255)                                                                                       cgaTGGTTAGTTTTGATCAACGTACCGTTAGGTATTGTCGCCCTGCTTCTGGCGATGCGCTTTCTGCCACCCAATGGTTCTCGCGCCAGTAAACCCCGTTTCGACCTGCCCAGCGCCGTGATGAACGCGTTAACCTTCGGCCt                                                        <  2:387887/141‑1 (MQ=255)                                                                                       aaaTGGTGATTGTCACGCCACGTACCGTTAGGTATTATCGCCCTGCTTCTGGCGAGGCGTTTTCTGCCACCCAATGGTTCGCGCGCCAGTAAACCCCGTTTCGACCTGCCCAGCGCCGTGATGAACGCGTTAACCTTCGGCCt                                                        <  2:79973/143‑1 (MQ=255)                                                                                        aaTGGTTATTTTTAATCAACGTACCGTTAGGTATTATCGCCCTGCTTCTGGCGATGCGTTTTCTGCCACCCAATGGTTCTCGCGCCAGTAAACCCCGTTTCGACCTGCCCAGCGCCGTGATGAACGCGTTAACCTTCGGCCTg                                                       <  2:642998/143‑1 (MQ=255)                                                                                               aTTTTTAATCAACGTACCGTTAGGTATTATCGCCCTGCTTCTGGCGATGCGTTTTCTGCGACGCGATGGTTCTCGCGCCAGTAAACCCCGTTTCGACGTGACCAGCGCCGTGCTGAACGCGCTAACTTTCGGGCCGCTTATcg                                                >  2:217122/1‑142 (MQ=255)                                                                                                 ttttACTCCACCTACCGTTAGCTATTATCGCCCTGCTTCTGGCGATGCGTTTTCTGCCACCCAATGGTTCTCGCGCCAGTAAACCCCGTTTCGACCTGCCCAGCGCCGTGATGAACGCGTTAACCTTCGGCCTGCTTATCACt                                              <  2:207684/143‑1 (MQ=255)                                                                                                  tttAATCAACGTACCGTTAGGTATTATCGCCCTGCTTCTGGCGATGCGTTTTCTGCCACCCGATGGTTCTCGCGCCAGTAAACCCCGTTTCGACCTGCCCAGCGCCGTGATGAACGCGGTAACCGTCGGCCTGCTCATCAcgg                                             >  2:624836/1‑141 (MQ=255)                                                                                                     aaTCAACGTACCGTTAGGTATTATCGCCCTGCTTCTGGCGATGCGTTTTCTGCCACCCAATGGTTCTCGCGCCAGTAAACCCCGTTTCGACCTGCCCAGCGCCGTGATGAACGCGTTAACCTTCGGCCTGCTTATCACTGCGt                                          <  1:448985/143‑1 (MQ=255)                                                                                                       cattgggtggcagaaaacgcatcgccagaagcagggcgatGCGTTTTCTGCCACCCAATGGTTCTCGCGCCAGTAAACCCCGTTTCGACCTGCCCAGCGCCGTGATGAACGCGTTAACCTTCGGCCTGCTTATCACTGCg                                           <  1:12065‑M2/100‑1 (MQ=255)                                                                                                       cattgggtggcagaaaacgcatcgccagaagcagggcgatGCGTTTTCTGCCACCCAATGGTTCTCGCGCCAGTAAACCCCGTTTCGACCTGCCCAGCGCCGTGATGAACGCGTTAACCTTCGGCCTGCTTATCACTGCg                                           >  2:12065‑M2/41‑140 (MQ=255)                                                                                                        cAACGTCCCGTTAGGTATTATCGCCCTGCGTCTGGCGATGCGTTTTCTGCCACCCAATGGTTCTCGCGCCAGTAAACCCCGTTTCGACCTGCCCAGCGCCGTGATGAACGCGTTAACCTTCGGCCTGCTTATCACTGCGTTGa                                       <  1:290171/143‑1 (MQ=255)                                                                                                        cAACGTACCGTTAGGTATTATCGCCCTGCTTCTGGCGATGCGTTTTCTGCCACCCAATGGTTCTTTCGCCAGTAAACACCGTTTCGACCTGCCCAGCGCCGTGATGAACGCGTTAACCTTCGACCTGCTTATCACTGAGTTGa                                       >  2:518781/1‑143 (MQ=255)                                                                                                         aaCGTACCGTTAGGTATTATCGCCCTGCTTCTGGCGATGCGTTTTCTGCCACCCAATGGTTCTCGCGCCAGTAAACCCCGTTTCGACCTGCCCAGCGCCGTGATGAACGCGTTAACCTTCGGCCTGCTTATCACTGCGTTGAg                                      <  2:299234/143‑1 (MQ=255)                                                                                                          aCGTAACGTTAGGTATTATCGCCCTGCTTCTGGCGATGCGTCTTCTGCCACCCAATGGTTCTCGCGCCAGTAAACCCCGCTTCGAACTGCCCAGAGCCGTGATGAACGCGTTAACCGTCGGCCTGCTTATCACCGCGCTGAGt                                     >  2:54993/1‑143 (MQ=255)                                                                                                              aCCGTGAGGTATTATCGCCCTGCTTCTGGCGATGCGTTTTCTGCCACCCAGTGGTTCTCGCGCCAGTAAACCCCGTTTCGACCTGCCCAGCGCCGTGATGAACGCGTTAACCTTCGGCCTGCTTATCACTGCGTTGAGTGGtt                                 <  2:132542/143‑1 (MQ=255)                                                                                                                cGTTAGGTACTTGCGCGTTGTTTCTGGCGATGCGTTTTCTGCTCCCCTTTGGTCCTCGCGCCAGTAATCCCCGTTTCGACCTGCCCAGCGCCGTGATGAACTCGTTAACCTTCGGCCTGCTTATCACTGCGTTGAGTGGTTTc                               <  2:502528/143‑1 (MQ=255)                                                                                                                  ttAGGTATTATCGCCCTGCTTCTGGCGATGCGTTTTCTGCCACCCAATGGTTCTCGCGCCAGTAAACCCCGTTTCGACCTGCCCAGCGCCGTGATGAACGCGTTAACCTTCGGCCAGCTTATCGCTGCGTTGAGGGGTTTCga                             >  2:743570/1‑142 (MQ=255)                                                                                                                        cgcatcgccagaagcagggcgatGCGTTTTCTGCCACCCAATGGTTCTCGCGCCAGTAAACCCCGTTTCGACCTGCCCAGCGCCGTGATGAACGCGTTAACCTTCGGCCTGCTTATCACTGCCGTGACTGGTTTCGCTCCggg                       >  2:264784‑M2/24‑143 (MQ=255)                                                                                                                            TCGCCCTGCTTCTGGCGATGCGTTTTCTGCCACCCAATGGTTCTCGCGCCAGTAAACCCCGTTTCGACCTGCCCAGCGCCGTGATGAACGCGTTAACCTTCGGCCTGCTTATCACTGCGTTGAGTGGTTTCGCTCAGGGGCaa                   <  1:636588‑M1/143‑1 (MQ=255)                                                                                                                               CCCTGCTTCTGGCGATGCGTTTTCTGCCACCCAATGGTTCTCGCGCCAGTAAACCCCGTTTCGACCTGCCCAGCGCCGTGCGGAACGCGTTAACCTTCGGCCTGCTTATCACTGCGTTGAGTGGTTTCGCTCAGGGGCAGTCg                <  1:659242‑M1/143‑1 (MQ=255)                                                                                                                                CCTGCTTCTGGCGATGCGTTTTCTGCCACCCAATGGTTCTCGCGCCAGTAAACCCCGTTTCGACCTGCCCAGCGCCGTGATGAACGCGTTAACCTTCGGCCTGCTTATCACTGCGTTGAGTGGTTTCGCTCAGGGGCAATCGc               <  1:704294‑M1/143‑1 (MQ=255)                                                                                                                                CCTGCTTCTGGCGATGCGTTTTCTGCCACCCAATGGTTCTCGCGCCAGTAAACCCCGTTTCGACATGCCCAGCGCCGTGATGAACGCGTTAACCTTCGGCCTGCTTATCACTGCGTTGAGTGGTTTCGCTCAGGGGCAATCGc               <  1:704477‑M1/143‑1 (MQ=255)                                                                                                                                 cTGCTTCTGGCGATGCGTTTTCTGCCACCCAATGGTTCTCGCGCCAGTAAACCCCGTTTCGACCTGCCCAGCGCCGTGATGAACGCGTTAACCTTCGGCCTGCTTATCACTGCGTTGAGTGGTTTCGCTCAGGGGCAATCGCt              <  2:486444/143‑1 (MQ=255)                                                                                                                                      tCTGGCGATGCGTTTTCTGCCACCCAATGGTTCTCGCGCCAGTAAACCCCGTTTCGACCTGCCCAGCGCCGTGATGAACGCGTTAACCTTCGGCCTGCTGATCACTGCGTTGAGTGGTTTCGCTCAGGGGCAATCGCTGACgg         >  1:400530/1‑142 (MQ=255)                                                                                                                                             atGCGTTTTCTGCCACCCAATGGTTCTCGCGCCAGTAAACCCCGTTTCGACCTGCCCAGCGCCGTGATGAACGAGTAATATTTCGGCTTGCTTATCACTGCGTTGAGTGGTTTCGCTCAGGGGCAATCGCTGACGTTAATTGc  >  1:291860‑M2/3‑143 (MQ=255)                                                                                                                                               |                                                                                                                                             GGATGGGCATAAACTCGTTTATTGTTGCCGTCTCTTCTGCTGCCGGGCCGACAATTGCTGCAGCAATCCTCTCCATCGCATCCTGGAAATGGTTATTTTTAATCAACGTACCGTTAGGTATTATCGCCCTGCTTCTGGCGATGCGTTTTCTGCCACCCAATGGTTCTCGCGCCAGTAAACCCCGTTTCGACCTGCCCAGCGCCGTGATGAACGCGTTAACCTTCGGCCTGCTTATCACTGCGTTGAGTGGTTTCGCTCAGGGGCAATCGCTGACGTTAATTGC  >  NC_000913/1910697‑1910979

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.