New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2382550	46 (1.150)	5 (0.130)	5/248	NT	10.1%	intergenic (+25/‑163)	rbn/elaD	ribonuclease BN/protease ElaD
	?	NC_000913	= 2382557	46 (1.230)					intergenic (+32/‑156)	rbn/elaD	ribonuclease BN/protease ElaD

CGTCAGCTCGCGCTATGATGACAAAGGTTGTCAGCACCTGTTACGTGAATGCAGGTCAATTTTCCCGGCGACTGAACTGGCGAATGATTTCACCGTGTTTAACGTTTAACTCTGCTTATTATTAAAAACAGGGCGAAACTTGCCCTGTTATCGCAACCCGCGCTACATATATCCACCCACACAGGCATATTGAGCGATTTTTGATATTTATTCATCTCCTTACGCACTATATTCAGAGCAATAAGTTGCCTCTTTTCATCTTGATTCAGCAC  >  NC_000913/2382417‑2382688                                                                                                                                             |                                                                                                                                    cGTCAGCTCGCGCTATGATGACAAAGGTTGTCAGCACCTGTTACGTGAATGCAGGTCAATTTTCCCGGCGACTGAACTGGCGAATGATTTCACCGTGTTTAACGTTTAACTCTGCTTATTATTAAAAACAGGGCGAAACTTgc                                                                                                                                   >  2:664432‑M2/1‑141 (MQ=255)  gTCAGCTCGCGCTATGATGACAAAGGTTGTCAGAACCTGTTACGTGAATGCAGGTCAATTTTCCCGGCGACTGAACTGGCGAATGATTTCACCGTGTTTAACGTTTAACTCTGCTTATTATTAAAAACAGGGCGAAACTTgcc                                                                                                                                  >  1:23940‑M2/1‑140 (MQ=255)       cTCGCGCTATGATGACAAAGGTTGTCAGCACCTGTTACGTGAATGCAGGTCAATTTTCCCGGCGACTGAACTGGCGAATGATTTCACCGTGTTTAACGTTTAACTCTGCTTATTATTAAAAACAGGGCGAAACTTgccctgtt                                                                                                                             <  2:59116‑M2/143‑9 (MQ=255)          gcgcTATGATGACAAAGGTTGTCAGCACCTGTTACGTCAATGCAGGCCAATTTTCACGAAGACTGAACTGGCGAATGATTTCACCGTGTTTAACGTTTAACTCTGCTTATTATTAAAAACAGGCCGAAACTCgccctctcaac                                                                                                                          <  2:148450‑M2/143‑12 (MQ=255)                   tgaCAAAGGTTGTCAGCGCCTGTTACGTGAATGCAGGTCAATTGTCCCGGCGACTGAACTGGCGAATGATTTCACCGTGTTTAACGTTTAACTCTGCTTATTATTAAAAACAGGGCGAAACTTGCCCTGTTATCGCAACCcgc                                                                                                                 <  1:352886/143‑1 (MQ=255)                    gaCAAAGGTTGTCAGCACCTGTTACGTGAATGCAGGTCAATTTTCCCGGCGACTGAACTGGCGAATGATTTCACCGTGTTTAACGTTTAACTCTGCTTATTATTAAAAACAGGGCGAAACTTGCCCTGTTATCGCAACCcgcg                                                                                                                <  1:560917/143‑1 (MQ=255)                           gTTGTCAGCACCTGTTACGTGAATGCAGGTCAATTTTCCCGGCGACTGAACTGGCGAATGATTTCACCGTGTTTAACGTTTAACTCTGCTTATTATTAAAAACAGGGCGAAACTTGCCCTGTTATCGCAACCCGCGCTACata                                                                                                         <  1:253555/143‑1 (MQ=255)                               tCAGCACCTGTTACGTGAATGCAGGTCAATTTTCCCGGCGACTGAACTGGCGAATGATTTCACCGTGTTTAACGTTTAACTCTGCTTATTATTAAAAACAGGGCGAAACTTGCCCTGTTATCGCAACCCGCGCTACATATATc                                                                                                     >  1:586233/1‑143 (MQ=255)                                cAGCACCTGTTACGTGAATGCAGGTCAATTTTCCCGGCGACTGAACTGGCGAATGATTTCACCGTGTTTAACGTTTAACTCTGCTTATTATTAAAAACAGGGCGAAACTTGCCCTGTTATCGCAACCCGCGCTACATCTATca                                                                                                    >  2:36897/1‑142 (MQ=255)                                   cACCTGTTACGTGAAGGCAGGTCAATTTTCCCGGCGACTGAACTGGCGAATGATTTCACCGTGTTTAACGTTTAACTCTGCTTATTATTAAAAACAGGGCGAAACTTGCCCTGTTATCGCAACCCGCGCTACATATATccacc                                                                                                 <  1:13918/143‑1 (MQ=255)                                       tGTTACGTGAATGCAGGTCAATTTTCCCGGCGACTGAACTGGCGAATGATTTCACCGTGTTTAACGTTTAACTCTGCTTATTATTAAAAACAGGGCGAAACTTGCCCTGTTATCGCAACCCGCGCTACATATATCCACCcaca                                                                                             <  1:638337/143‑1 (MQ=255)                                          tACGTGAATGCAGGTCAATTTTCCCGGCGACTGAACTGGCGAATGATTTCACCGTGTTTAACGTTTAACTCTGCTTATTATTAAAAACAGGGCGAAACTTGCCCTGTTATCGCAACCCGCGCTACATATATCCACCCACACAg                                                                                          <  1:323528/143‑1 (MQ=255)                                            cGTGAATGCAGGTCAATTTTCCCGGCGACTGAACTGGCGAATGATTTCACCGTGTTTAACGTTTAACTCTGCTTATTATTAAAAACAGGGCGAAACTTGCCCTGTTATCGCAACCCGCGCTACATATATCCACCCACACAGGc                                                                                        <  2:700410/143‑1 (MQ=255)                                                   gCAGGTCAATTTTCCCGGCGACTGAACTGGCGAATGATTTCACCGTGTTTAACGTTTAACTCTGCTTATTATTAAAAACAGGGCGAAACTTGCCCTGTTATCGCAACCCGCGCTACATATATCCACCCACACAGGCATATTGa                                                                                 <  2:104942/143‑1 (MQ=255)                                                   gCAGGTCAATTTTCCCGGCGACTGAACTGGCGAATGATTTCACCGTGTTTAACGTTTAACTCTGATTGTTATTAAAAACAGGGCGAGACTTGCCGTGTTATCGCAACCCGCGCTACATATATCCACCCACACAGGCATATTGa                                                                                 >  1:379080/1‑143 (MQ=255)                                                            ttttCCCGGCGACTGAACTGGCGAATGAGTTCACCGTGTTTAACGTTTAACTCTGCGTATTATTAAAAACAGGGCGACACTTGCCCTGTTATCGCAACCCGCGCTACATATATCCACCCACACAGGCATATTGAGCGCttttt                                                                        >  2:477881/1‑143 (MQ=255)                                                            gagtCCCGGGAACGGAACTGGCGAATGAGTTCACCGTGTTTAACGTTTGACTCTGCTTATTATGAAAAACAGGGCGAAACTTGCCCTGTTATCGCAACCCGCGCTACATATATCCACCCACACAGGCATATTGAGCGAttttt                                                                        <  1:261989/140‑1 (MQ=255)                                                             gttCCCGGCGACTGAACTGGCGAATGATTTCACCGTGTTTAACGTTTAACTCTGCTTATTATTAAAAACAGGGCGAAACTTGCCCTGTTATCGCAACCCGCGCTACATAGATCCACCCACACAGGCATATTGAGCGATTTTTg                                                                       <  2:778178/142‑1 (MQ=255)                                                                 ccGGCGACTGAACTGGCGAATGATTTCACCGTGTTTAACGTTTAACTCTGCTTATTATTAAAAACAGGGCGAAACTTGCCCTGTTATCGCAACCCGCGCTACATATATCCACCCACACCGGCAGATTGAGCGATCTTTGctat                                                                   >  1:564773/1‑143 (MQ=255)                                                                  cGGCGACTGAACTGGCGAATGATTTCACCGTGTTTAACGTTTAACTCTGCTTATTATTAAAAACAGGGCGAAACTTgccctgtttttaataataagcagagttaaacgttaaacacggtgcaatcattcgccagttcagtcgc                                                                  <  2:125365‑M2/143‑68 (MQ=255)                                                                  cGGCGACTGAACTGGCGAATGATTTCACCGTGTGTAACGTTTAACTCTGCTTATTATTAAAAACAGGGCGAAACTTGCCCTGTTATCGCAACCCGCGCTACATATATCCACCCACACAGGCATATTGAGCGATTTTTGAtatt                                                                  <  1:435896/143‑1 (MQ=255)                                                                       aCTGAACTGGCGAATGATTTCACCGTGTTTAACGTTTAACTCTGCTTATTATTAAAAACAGGGCGAAACTTGCCCTGTTATCGCAACCCGCGCTACATATATCCACCCACACAGGCATATTGAGCGATTTTTGATATTTATTc                                                             <  1:236815/143‑1 (MQ=255)                                                                         tGAACTGGCGAATGATTTCACCGTGTTTAACGTTTAACTCTGCTTATTATTAAAAACAGGGCGAAACTTGCCCTGTTATCGCAACCCGCGCTACATATATCCACCCACACAGGCATATTGAGCGATTTATGATATTTATTCAt                                                           >  1:226876/1‑143 (MQ=255)                                                                                 cGAATGATTTCACCGTGATTAACGTTTAACTCTGCTTATTATTAAAAACAGGGCGAAACTTGCCCTGTTATCGCAACCCGCGCTACATATATCCACCACCACAGGCATATTGAGCGATGTTCGATATTGATTCCGCTCCTTAc                                                   >  2:648824/1‑143 (MQ=255)                                                                                   aaTGATTTCACCGTGTTTAACGTTTAACTCTGCGTATTATTAAAAACGGGGCGAAGCTTGCCCTGTTATCGCAACCCGCGCTACATCTATCCACCCCCACATGCTTATTGAGCGATTTTTGGTATTTTTTCATCTCCTTACGc                                                 >  2:560484/1‑143 (MQ=255)                                                                                          tCACCGTGTTTAACGTTTAACTCTGCTTATTATTAAAAACAGGGCGAAACTTGCCCTGTTATCGCAACCCGCGCTACATATATCCACCCACACAGGCATATTGAGCGATTTTTGATATTTATTCATCTCCTTACGCACTatat                                          >  2:749596/1‑143 (MQ=255)                                                                                           cACCGTGTTTAACGTTTAACTCTGCTTATTATTAAAAACAGGGCGAAACGTGCCCTGTTATCGCAACCCGCGCTACATATATCCACCCACACAGGCATATTGAGCGATTTTTGATATTTATTCATCTCCTTACGCACTATAtt                                         <  2:20894/143‑1 (MQ=255)                                                                                            aCCGTGTTTAACGTTTAACTCTGCTTATTATTGAAAACAGGGCGAAACTTGCCCTGTTATCGCAACCCGCGCTACATATATCCACCCACACAGGCATATTGAGCGATTTTTGATATTTATTCATCTCCTTACGCACTATATTc                                        >  2:412231/1‑143 (MQ=255)                                                                                            aCCGTGTTTAACGTTTAACTCTGCTTATTATTAAAAACAGGGCGAAACTTGCCCTGTTATCGCAACCCGCGCTACATATATCCACCCACACAGGCATATTGAGCGATTTTGGATATTTATTCATCTCCTTACGCACTATATTc                                        >  1:230855/1‑143 (MQ=255)                                                                                              cGTGTTTAACGTTTAACTCTGCTTATTATTAAAAACAGGGCGAAACTTGCCCTGTTATCGCAACCCGCGCTACATATATCCACCCACACAGGCATATTGAGCGATTTTTGATATTTATTCATCTCCTTACGCACTATATTCag                                      >  1:126090/1‑143 (MQ=255)                                                                                               gtgtTTAACGTTTCACTCTGCTTATTATTAAAAACAGGGCGAAACTTGCCCTGTTATCGCAACCCGCGCTACATATATCCACCCACACAGGCATATTGAGCGATTTTTGATATTTATTCATCTCCTTACGCACTATATTCaga                                     <  2:187758/143‑1 (MQ=255)                                                                                               gcgtttaacgtttaacTCTGCTTAGTATTAAAGACAGGGCGAAACTTGCCCTGTTATCGCAACCCGCGCTACATATATCCACCCACACAGGCATATTGAGCGATTTTTGATATTTATTCATCTCCTTACGCACTATATTCaga                                     <  1:317410/141‑1 (MQ=255)                                                                                                tgtTTAACGTTTAACTCTGCTTATTATTAAAAACAGGGCGAAACTTGCCCTGTTATCGCAACCCGCGCTACATATATCCACCCACACAGGCATATTGAGCGATTTTTGATATTTATTCATCTCCTTACGCACTATATTCagag                                    <  1:787717/143‑1 (MQ=255)                                                                                                  tttaacgtttaacTCTGCTTATTATTAAAAACAGGGCGAAACTTgccctgtttttaataataagcagagttaaacgttaaacacggtgaaatcattcgccagttcagtcgccgggaaaattgacatgcattcacgtaacaggt                                  <  2:262285‑M2/143‑100 (MQ=255)                                                                                                   ttaacgtttaacTCTGCTTATTATTAAAAACAGGGCGAAACTTGCCCTGTTATCGCAACCCGCGCTACATATATCCACCCACACAGGCATATTGAGCGATTTTTGATATTTATTCATCTCCTTACGCACTATATTCAGAGCaa                                 >  1:638268/1‑143 (MQ=255)                                                                                                      acgtttaacTCTGCTTTTTATCAAACACAGGGCGAAACTTGCCCTGTTATCGCAACCCGCGCTACATATATCCACCCACACAGGCATATTGAGCGATTTTTGATATTTATTCATCTCCTTACGCACTATATTCAGAGCAATaa                              <  2:374168/143‑1 (MQ=255)                                                                                                      acgtttaacTCTGCTTATTATTAAAAACAGGGCGAAACTTGCCCTGTTATCGCAACCCGCGCTACATATATCCACCCACACAGGCATATTGAGCGATTTTTGATATTTATTCATCTCCTTACGCACTATATTCAGAGCAATaa                              <  1:506503/143‑1 (MQ=255)                                                                                                      acgtttaacTCTGCTTATTATTAAAAACAGGGCGAAACTTGCCCTGTTATCGCAACCCGCGCTACATATATCCACCCACACAGGCATATTGAGCGATTTTTGATATTTATTCATCTCCTTACGCACTATATTCAGAGCAATaa                              <  1:59116/143‑1 (MQ=255)                                                                                                             acTCTGCTTATTAGTAACAACAGGGCGAAACTTGACCTGTGATCGCAACCCGCGCTATATATATCCACCCACACAGGCATATTGAGCGATTTTTGATATTTATTCATCTCCTTACGCACTATATTCAGAGCAATAAGTTGCct                       <  2:49800/143‑1 (MQ=255)                                                                                                              ctctGCTTATTATTAAAAACAGGGCGAAACTTGCCCTGTTATCGCAACCCGCGCTACATATATCCACCCACACAGGCATATTGAGCGATTTTTGATATTTATTCATCTCCTTACGCACTATATTCAGAGCAATAAGTTGCctc                      >  2:333598/1‑143 (MQ=255)                                                                                                              ctctGCTTATTATTAAAAACAGGGCGAAACTTGCCCTGTTATCGCAACCCGCGCTACATATATCCACCCACACAGGCATATTGAGCGATTTTTGATATTTATTCATCTCCTTACGCACTATATTCAGAGCAATAAGTTGCctc                      >  1:756557/1‑143 (MQ=255)                                                                                                               tctGCTTATTATTAAAAACAGGGCGAAACTTGCCCTGTTATCGCAACCCGCGCTACATATATCCACCCACACAGGCATATTGAGCGATTTTTGATATTTATTCATCTCCTTACGCACTGTATTCAGAGCAATAAGTTGCctct                     >  2:415613/1‑143 (MQ=255)                                                                                                                ctGCTTATTATTAAAAACAGGGCGAAACTTGCCCTGTTATCGCAACCCGCGCTACATATATCCACCCACACAGGCATATTGAGCGATTTTTGATATTTATTCATCTCCTTACGCACTATATTCAGAGCAATAAGTTGCCTCtt                    <  1:172340/143‑1 (MQ=255)                                                                                                                 tGCTTATTATTAAAAACAGGGCGAAACTTGCCCTGTTATCGCAACCCGCGCTACATATATCCACCCACACAGGCATATTGAGCGATTTTTGATATTTATTCCTCTCCTGACGCACTATACTCGGGGCAATAAGTTGCCTCttt                   >  1:65411/1‑143 (MQ=255)                                                                                                                    ttattactaCACACAGGGCGAAACTTGTCCTGTTATCGCAACCCGCGCTACATATATCCACCCACACAGGCATATTGAGCGATTTTTGATATTTATTCATCTCCTTACGCACTATATTCAGAGCAATAAGTTGCCTCTTTTCa                <  1:177478/143‑1 (MQ=255)                                                                                                                     tattattaAAAACAGGGCGAAACTTGCCCTGTTATCGCAACCCGCGCTACATATATCCACCCACACAGGCATATTGAGCGATTTTTGATATTTATTCATCTCCTTACGCACTATATTCAGAGCAATAAGTTGCCTCTTTTCAt               <  2:167836/143‑1 (MQ=255)                                                                                                                          ttaAAAACAGGGCGAAACTTGCCCTGTTATCGCAACCCGCGCTACATATATCCACCCACACAGGCATATTGAGCGATTTTTGATATTTATTCATCTCCTTACGCACTATATTCAGAGCAATAAGTTGCCTCTTTTCATCttaa          >  2:295292/1‑141 (MQ=255)                                                                                                                          ttaAAAACAGGGCGAAACTTGCCCTGTTATCGCAACCCGCGCTACATATATCCACCCACACAGGCATATTGAGCGATTTTTGATATTTATTCATCTCCTTACGCACTATATTCAGAGCAATAAGTTGCCTCTTTTCATCTTGa          >  1:584367/1‑143 (MQ=255)                                                                                                                          ttaAAAACAGGGCGAAACTTGCCCTGTTATCGCAACCCGCGCTACATATATCCACCCACACAGGCATATGGAGCGAGTTTTGATATTGATTCATCTCCTTACGCACTATATGCAGAGCAATAAGTTGCCTCTTTTCTTCTTGa          >  2:331375/1‑143 (MQ=255)                                                                                                                           taAAAACAGGGCGAAACTTgccctgtttttaataataagcagagttaaacgttaaacacggtgaaatcattcgccagttcagtcgccgggaaaattgacctgcattcacgtaacaggtgctgacaacctttgt                   >  1:44591‑M2/1‑19 (MQ=255)                                                                                                                           taAAAACAGGGCGAAACTTgccctgtttttaataataagcagagttaaacgttaaacacggtgaaatcattcgccagttcagtcgccgggaaaattgacctgcattcacgtaacaggtgctgacaacctttgt                   <  2:44591‑M2/133‑115 (MQ=255)                                                                                                                           taAAAACAGGGCGAAACTTGCCCTGTTATCGCAACCCGCGCTACATATATCCACCCACACAGGCATATTGAGCTATTTTTGATATTTATTCATCTCCTTACGCACTATATTCAGAGCAATAAGTTGCCTCTTTTCTTCTTGAt         >  1:494860/1‑143 (MQ=255)                                                                                                                               aaCAGGGCGAAACTTGCCCTGTTATCGCAACCCGCGCTACATATATCCACCCACACAGGCATATTGAGCGATTTTTGATATTTATTCATCTCCTTACGCACTATATTCAGAGCAATAAGTTGCCTCTTTTCATCTTGATTCAg     <  2:16582/143‑1 (MQ=255)                                                                                                                                 cAGGGCGAAACTTGCCCTGTTATCGCAACCCGCGCTACATATATCCACCCACACAGGCATATTGAGCGATTTTTGATATTTATTCATCTCCTTACGCACTATATTCAGAGCAATAAGTTGCCTCTTTTCATCTTGATTCAGca   >  2:149031/1‑143 (MQ=255)                                                                                                                                  aGGGCGAAACTTgccctgtttttaataataagcagagttaaacgttaaacacggtgaaatcattcgccagttcagtcgccgggaaaattgacctgcattcacgtaacaggtgctgacaacctttgtcatcatagcgcgagctg  <  2:290898‑M2/143‑132 (MQ=255)                                                                                                                                             |                                                                                                                                    CGTCAGCTCGCGCTATGATGACAAAGGTTGTCAGCACCTGTTACGTGAATGCAGGTCAATTTTCCCGGCGACTGAACTGGCGAATGATTTCACCGTGTTTAACGTTTAACTCTGCTTATTATTAAAAACAGGGCGAAACTTGCCCTGTTATCGCAACCCGCGCTACATATATCCACCCACACAGGCATATTGAGCGATTTTTGATATTTATTCATCTCCTTACGCACTATATTCAGAGCAATAAGTTGCCTCTTTTCATCTTGATTCAGCAC  >  NC_000913/2382417‑2382688

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.