New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2731065 =	45 (1.130)	7 (0.180)	5/256	NT	21.3%	noncoding (93/1542 nt)	rrsG	16S ribosomal RNA
	?	NC_000913	= 4208221	8 (0.210)					noncoding (75/1542 nt)	rrsE	16S ribosomal RNA

ATACCAAGTCTCAAGAGTGAACACGTAATTCATTACGAAGTTTAATTCTTTGAGCATCAAACTTTTAAATTGAAGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATGCAAGTCGAACGGTAACAGGAAGAAGCTTGCTTCTTTGCTGACGAGTGGCGGACGGGTGAGTAATG  >  NC_000913/4208081‑4208268                                                                                                                                             |                                                acaccAAGTCTCAAGAGTGAACAAGTAATTCATTACGAAGTTTAATTCTTTGAGCATCAAACTTTTAAACTGAAGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACAGGCAAGTCGAACGGTAACAGga                                               >  1:360765‑M2/3‑141 (MQ=255) aTACCAAGTCTCAAGAGTGAACACGTAATTCATTACGAAGTTTAATTCTTTGAGCATCAAACTTTTAAATTGTTGAGGCCTATCATGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATGCAAGTCGAACGGTAACAGga                                               <  1:576925‑M2/143‑3 (MQ=255) aTACCAAGTCTCAAGAGTGAACACGTAATTCATTACGAAGTTTAATTCTTTGAGCATCAAACTTTTAAATTGAAGAGTTCGAGCATGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATGCAAGTCCAAAGGTAACAGgc                                               <  2:7683‑M2/143‑3 (MQ=255) aTACCAAGTCTCAAGAGTGAACACGTAATTCATTACGAAGTTTAATTCTTTGAGCATCAAACTTTTAAATTGAACAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATGCAAGTCGAACGGTAACAGga                                               >  1:419326‑M2/1‑141 (MQ=255)  tACCAAGTCTCAAGAGTGAACACGTAATTCATTACGAAGTTTAATTCTTTGAGCATCAAACTTTTAAATTGAAGCGTTTGATCATGGCTAAGATTGAATGCTGGCGGGAAGCATACCGAATGGAGGCGGAACGGTAAGAGgaa                                              <  2:509352‑M2/143‑4 (MQ=255)   aCCAAGTCTCAAGAGTGAACACGTAATTCATTACGAAGTTTAATTCTTTGAGCATCAAACTTTTAAATTGAAGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATGCAAGTCGAACGGTAACAGgaag                                             <  2:69102‑M2/143‑5 (MQ=255)     cAAGTCTCAAGAGTGAACACGTAATTCATTACGAAGTTTAATTCTTTGAGCATCAAACTTTTAAATTGAAGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATGCACGTAGAACGGTAACAGggagaa                                           >  2:438660/1‑143 (MQ=9)        gtctttagagTTAACACTTAATTCAGTACGAATTTTTATTCTTTGAGCATCACACTTTTCAATTGAAGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATGCAAGTCGAACGGTAACAGGAAGAAgct                                        <  2:388309/137‑1 (MQ=11)          ctcAAGAGGGAACACGTAATGCATTACGAAGTTTAATTCTTTGAGCATCAAACTTTTAAATTGAAGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATGCAAGTCGAACGGTAACAGGAAGAAgcttg                                      <  2:666038/143‑1 (MQ=17)                agTGAACACGTACTTCATTACGAAGTTTAATTCTTTGAGCATCAAACTTTTAAAGTGAAGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATGCAAGTCGAACGGTAACAGgaagcagcaagctgctt                                >  2:253‑M2/1‑126 (MQ=255)                agTGAACACGTAATTCATTACGAAGTTTAATTCTTTGAGCATCAAACTTTTAAATTGAAGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCCCAACACATGCAAGTCGAACGGTAACAGgaagcagcaagctgctt                                >  2:146562‑M2/1‑126 (MQ=255)                 gTGAACACGTAATTCATTACGAAGTGTAATTCTTTGAGCATCAAACTTTTAAATTGAAGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATGCAAGTCGAACGGTAACAGGAAGAAGCTTGCTTCttt                               <  2:712318/143‑1 (MQ=17)                  tGACCACGTAGTTCGTTACGAAGGTTAATTCTTTGAGCATCAAACTTTTAAATTGAAGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATGCCAGTCGAACGGTAACAGgaagcagcaagctgcttcc                              >  2:684253‑M2/1‑124 (MQ=255)                    aaCACGTAATTCATTACGAAGTTTAATTCTTTGAGCATCAAACTTTTAAATTGAAGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATGCAAGTCGAACGGTAACAGgaagaagcaagcttcttcctg                            >  2:81036‑M2/1‑122 (MQ=255)                       acGTAATTCATTACGAAGTTTAATTCTTTGAGCATCAAACTTTTAAATTGAAGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATGCAAGTCGAACGGTAACAGgaagcagcaagctgcttcctgtta                         >  1:108598‑M2/1‑119 (MQ=255)                         gTAATTCATTACGAAGTTTAATTCTTTGAGCATCAAACTTTTAAATTGAAGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATGCAAGTCGAACGGTAACAGGAAGAAGCTTGCTTCTTTGCTGACGa                       <  1:122498/143‑1 (MQ=32)                          tAATTCATTACGAAGTTTAATTCTTTGAGCATCAAACTTTTAAATTGAAGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATGCAAGTCGAACGGTAACAGGAAGAGGCTTGCTTGTGTGCTgaggag                      >  1:336607/1‑143 (MQ=255)                          tAATTCATTACGAAGTTTAATTCTTTGAGCATCAAACTTTTAAATTGAAGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATGCAAGTCGAACGGTAACAGGAAGAAGCTTGCTTCTTTGCTGACGAg                      <  2:743727/143‑1 (MQ=32)                           agtgcATTACGAAGTTTAATTCTTTGAGCATCAAACTTTTAGATGGAAGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATGCAAGTCGAACGGTCCCAGGAAGAAGCTTGCTTCTTTGCTGACGAGt                     <  2:97237/139‑1 (MQ=11)                             ttCATTACGAAGTTTAATTCTTTGAGCATCAAACTTTTAAATTGAAGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATGCAAGTCGAACGGTAACAGGAAGAAGCTTGCTTCTTTGCTGACGAGTgg                   <  1:318751/143‑1 (MQ=32)                                     gAAGTTTAATTCTTTGAGCATCAAACTTTTAAATTGAAGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATGCACGTCGAACGGTAACAGGAGGAAGCTTGCTTCATTGCCGACGAGGCGCGGACggg           >  2:375530/1‑143 (MQ=11)                                             aTTCTTTGAGCATCAAACTTTTAAATTGAAGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATGCAAGTCGAACGGTAACAGgaagcagcaagctgcttcctgttaccgttcgacttgcatgtgttag   >  1:348320‑M2/1‑97 (MQ=255)                                              gtcTTTGAGCATCGAACGTATAACTTGAAGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATGCAAGTCGAACGGTAACAGgaaacagcaagctgtttcctgttaccgttcgacttgcctgtgttcgg  >  2:754876‑M2/2‑96 (MQ=255)                                                                                                                                             |                                                ATACCAAGTCTCAAGAGTGAACACGTAATTCATTACGAAGTTTAATTCTTTGAGCATCAAACTTTTAAATTGAAGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATGCAAGTCGAACGGTAACAGGAAGAAGCTTGCTTCTTTGCTGACGAGTGGCGGACGGGTGAGTAATG  >  NC_000913/4208081‑4208268

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.