New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3933714	49 (1.230)	3 (0.080)	3/250	NT	6.0%	coding (364/420 nt)	rbsD	D‑ribose pyranase
	?	NC_000913	= 3933733	48 (1.270)					coding (383/420 nt)	rbsD	D‑ribose pyranase

ACGAAACGTTGCTCACTCACCTTGAGCAGCTGCAAAAACACCAGGGAAATACCATTGAAATTCGTTACACCACGCATGAACAATTCAAACAACAAACCGCAGAAAGTCAGGCGGTAATTCGCAGCGGAGAATGTTCTCCGTATGCGAATATCATTCTCTGTGCTGGCGTGACGTTCTGAGGCCGTCATGGAAGCATTACTTCAGCTTAAAGGCATCGATAAAGCCTTCCCGGGCGTAAAAGCCCTCTCGGGCGCAGCGTTAAATGTCTATCCG  >  NC_000913/3933592‑3933864                                                                                                                                              |                                                                                                                                    aCGAAACGTTGCTCACTCACCTTGAGCAGCTGCAAAAACACCAGGGAAATACCATTGAAATTCGTTACACCACGCATGAACAATTCAAACAACAAACCGCAGAAAGTCAGGCGGTAATTCGAAGCCGAGAATATTCGCCTTAt                                                                                                                                    <  2:149017‑M2/143‑2 (MQ=255)  cGAAACGTTGCTCACTCACCTTGAGCAGCTGCAAAAACACCAGGGAAATACCATTGAAATTCGTTACACCACGCATGAACAATTCAAACAACAAACCGCAGCAAGTCAGGCGTTAATTGGCAGCGGAGAAGGTTCTCCGTAtg                                                                                                                                   <  1:610061‑M2/143‑3 (MQ=255)   taaacGTTGCGCACTCACCTTGAGCAGCTGCAAAGACACCAGGGAAATACCATTGAAATTCGTTACACCACGCATGAACAATTCGAACAACAAACCGCAGAAAGTCAGGCGGTAATTCGCAGCGGAGAATGTTCTCCGTAtgc                                                                                                                                  >  2:756502‑M2/2‑140 (MQ=255)   gAAACGTTGCTCACTCACCTTGAGCAGCTGCAAAAACACCAGGGAAATACCATTGAAATTCGTTACACCACGCATGAACAATTCAAACAACAAACCGCAGAAAGTCAGGCGGTAATCCGCATCGGCGCATGCTCTCCGTAtcc                                                                                                                                  <  1:138360‑M2/143‑4 (MQ=255)     aaCGTTGCTCACTCACCTTGAGCAGCTGCAAAAACACCAGGGAAATACCATTGAAATTCGTTACACCACGCATGAACAATTCAAACAACAAACCGCAGAAAGTCAGGCGGTAATTCGCAGCGGAGAATGTTCTCCGTAtgcga                                                                                                                                >  1:764083‑M2/1‑138 (MQ=255)        gTTGCTCACTCACCTTGAGCAGCTGCAAAAACACCAGGGAAATACCATTGAAATTCGTTACACCACGCATGAACAATTCAAACAACAAACCGCAGAAAGTCAGGCGGTAATTCGCAGCGGAGAATGTTCTCCGTATGCGAata                                                                                                                             <  1:338390/143‑1 (MQ=255)          tGCTCACTCACCTTGAGCAGCTGCAAACACACCAGGGAAAGACCATTGAAATTCGTTACACCACGCATGAACAATTCAAACAACAAACCGCAGAAAGTCAGGCGGTAATTCGCAGCGGAGAATGTTCTCCGTATGCGAATATc                                                                                                                           <  1:37436/143‑1 (MQ=255)           gCTCACTCACCTTGAGCAGCTGCAAAAACACCAGGGAAATACCATTGAAATTCGTTACACCACGCATGAACAATTCAAACAACAAACCGCAGAAAGTCAGGCGGTAATTCGCAGCGGAGAATGTTCTCCGTATGCGAATATCa                                                                                                                          <  2:489372/143‑1 (MQ=255)           gCTCACTCACCTTGACCAGCTGCAAAAACACCAGGGAAATACCATTGAAATTCGTCACACCACGCATGAACAACTCAAACAACAAACCGCAGAAAGTCAGGTGATAACGCGCAGCGGAGAATGTTCTCCGTATGCGAATATCa                                                                                                                          <  2:352761/143‑1 (MQ=255)             taactcacCTTGAGCAGCTGCAAACACACCAGGGAAATACCATTGAAATTCCTTACACCACGCCTGAACAATTCAAACAACCGACCGCAGAAAGTCAGGCGGTAATTCGCAGCGGAGAATGTTCTCCGTATGCGAATATCAtt                                                                                                                        <  1:15379/141‑1 (MQ=255)              cactcacCTTGAGCAGCTGCAAAAACACCAGGGAAATACCATTGAAATTCGTTACACCACGCATGAACAATTCAAACAACAAACCGCAGAAAGTCAGGCGGTAATTCGCAGCGGAGAATGTTCTCCGTATGCGAATATCATtc                                                                                                                       >  1:138466/1‑143 (MQ=255)                 tcacCTAGAGCAGCTGCAAAAACACCAGGGAAATACCATTGAAATTCGTTACACCACGCATGAACAATTCAAACAACAAACCGCAGAAAGTCAGGCGGTAATTCGCAGCGGAGAATGTTCTCCGTATGCGAATATCATTctct                                                                                                                    <  1:648188/143‑1 (MQ=255)                    ccTAGAGCAGCTGCAAAAACACCAGGGAAATACCATTGAAATTCGTTACACCACGCATGAACAATTCAAACAACAAACCGCAGAAAGTCAGGCGGTAATTCGCAGCGGAGAATGTTCTCCGTATGCGAATATCATTCTCtgtg                                                                                                                 <  2:416529/143‑1 (MQ=255)                        gAGCAGCTGCAAAAACACCAGGGAAATACCATTGAAATTCGTTACACCACGCATGAACAATTCAAACAACAAACCGCAGAAAGTCAGGCGGTAATTCGCAGCGGAGAATGTTCTCCGTATGCGAATATCATTCTCTGTGCTgg                                                                                                             <  2:400662/143‑1 (MQ=255)                           cagcTGCAAAAACACCAGGGAGATACCGTTGAAATTCGTTACACCACGCATGAACAATTCAAACAACAAACCGCAGAAAGTCAGGCGGTAATTCGCAGCGGAGAATGTTCTCCGTATGCGAATATCACTCTCTGTGCTGGCGt                                                                                                          >  2:689756/1‑143 (MQ=255)                            agcTGCAAAAACACCAAGGAAATACCATTGAAATTCGTTACACCACGCATGAACAATTCAAACAACAAACGGCAGAAAGTCAGGCGGTAATTCGCAGCGGAGAATGTTCTCCGTATGCGAATATCATTCTCTGTGCTGGCGTg                                                                                                         >  2:353692/1‑143 (MQ=255)                              ccgCAAAACCGCCAGGGAAATACCATTGAACTTCGTTACACCACGCATGAACAATTCAAACCACAATCCGCAGAAAGTCAGGCGGTAATTCGCAGCGGAGAATGTTCTCCGTATGCGAATATCATTCTCTGTGCTGGCGTGAc                                                                                                       <  1:241035/141‑1 (MQ=255)                               tGCAAAAACACCAGGGAAATACTATTGAAATTCGTTACACCACGCATGAACAATTCAAACAACAAACCGCAGAAAGTCAGGAGGTAATTCGCAGCGGAGAAAGTACTCCGTATGTGAATACTATCATCTGTGCTGGCGTGACg                                                                                                      >  2:731370/1‑143 (MQ=255)                                gCAAAAACACCAGGGAAATACCATTGAAATTCGTTACACCACGCATGAACAATTCAAACAACAAACCGCAGAAAGTCAGGCGGTAATTCGCAGCGGAGAATGTTCTCCGTATGCGAATATCATTCTCTGTGCTGGCGTGACGt                                                                                                     >  1:478796/1‑143 (MQ=255)                                 cAAAAACACCATCGAAATACCATTGAAATTCGTTACACCACGCATGAACAATTCAAACAACACACCGTATAAAGTCAGGCGGTAATTCGCAGCGGAGAATGTTCTCCGTATGCGAATATCATTCTCTGTGCTGGCGTGACGtt                                                                                                    <  1:215219/143‑1 (MQ=255)                                   cggatcgcAGGGACATACCAGTGAAAGTCGTTACACCACGGATGAACAATGCAAACAACAAACCGCAGAAAGTCAGGCGGTAATTCGCAGCGGAGAATGTTGTCCGTATGCGAATATCATTCTCTGTGCTGGCGTGACGTTCt                                                                                                  <  1:732829/136‑1 (MQ=255)                                     aaCAGCAGGGAAAGACCATCGAAAGTCGTTACACCACGCAGGAACAATTCAAACAACAAACCGCAGAAAGTCAGGCGGTAATTCGCAGCGGAGAATGTTCTCCGTATGCGAATATCATTCTCTGTGCTGGCGTGACGTTCTGa                                                                                                <  2:400191/143‑1 (MQ=255)                                     aaCACCAGGGAAATACCATTGAAATTCGTTACACCACGCATGAACAATTCAAACAACAAACCGCAGAAAGTCAGGCGGTAATTCGCAGCGGAGAATGTTCTCCGTATGCGAATATCATTCTCTGTGCTGGAGGGCCGCTCTGa                                                                                                >  2:670081/1‑143 (MQ=255)                                      ccacCAGGGAAATACCATTGAAATTCGTTACACCACGCATGAACAATTCAAACAACAAACCGCAGAAAGTCAGGCGGTAATTCGCAGCGGAGAATGTTCTCCGTATGCGAATATCATTCTCTGTGCTGGCGTGACGTTCTGAg                                                                                               <  2:261126/142‑1 (MQ=255)                                        acCAGGGAAATACCATTGAAATTCGTTACACCACGCATGAACAATTCAAACAACAAACCGCAGAAAGTCAGGCGGTAATTCGCAGCGGAGAATGTGCTCCGTATGCGAATACCATTCTCTGTGCTGGCGTGACGTTCTGAGGc                                                                                             >  2:279535/1‑143 (MQ=255)                                         ccAGTGAAATACCATTGAAATTCGTTACACGACGCGTGGACAATTCAAACATCGAACCGCTGCAAGTCAGGCGGTAATTCGCTGCGTTGAATGTTTTGCGTAtgcgaattaccgcctgactttctgcggtttgttgtttgaat                                                                                            >  2:114385‑M2/1‑102 (MQ=255)                                         ccAAGGAAATACCATTGAAATTCGTGACACCACCCATGAACAATTCAAACAACAAACCGCAGAAAGTCAGGCGGTAATTCGCAGCGGAGAATGTTCTCCGTATGCGAATATCATTCTCTGTGCTGGCGTGACGTTCTGAGGcc                                                                                            <  1:92969/143‑1 (MQ=255)                                           acggAAATACCATAGAAATTCGTTACACCACGCATGAACAATTCAAACAACAAACCGCAGAAAGTCAGGCGGTAATTCGCAGCGGAGAATGTTCTCCGTATGCGAATATCATGCTCTGTGCTGGCGTGACGTTCTGAGGCCGt                                                                                          <  1:408900/141‑1 (MQ=255)                                           aGGGAAATACCATTGAAATTCGTTACACCACGCATGAACAATTCAAACAACAAACCGCAGAAAGTCAGGCGGTAATTCGCAGCGGAGAATGTTCTCCGCATGCGAATATCATCCTCTGCGCTGGCGTGACGCTCTGAgctcgg                                                                                          >  2:732829/1‑138 (MQ=255)                                                      aTTGAAATTCGTTACACCACGCATGAACAATTCAAACAACAAACCGCAGAAAGTCAGGCGGTAATTCGCAGCGGAGAATGTTCTCCGTATGCGAATATCATTCTCTGTGCTGGCGTGCCGCTCTGAGGCCGTCATGGAAGCAt                                                                               >  2:341158/1‑143 (MQ=255)                                                        tGAAATTCGTTACACCACGCATGAACAATTCAAACAACAAACCGCAGAAAGTCAGGCGGTAATTCGCAGCGGAGAATGTTCTCCGTATGCGAATATCATTCTCTGTGCTGGCGTGACGTTCTGAGGCCGTCATGGAAGCATTa                                                                             >  1:376913/1‑143 (MQ=255)                                                         gcgcttCGTTACACCCCGCAGGATCTATCCAAACAACAAACCGCAGAAAGTCAGGCGGTAATTCGCAGCGGAGAATGTTCTCCGTATGCGAATATCATTCTCTGTGCTGGCGTGACGTTCTGAGGCCGTCATGGAAGCATTAc                                                                            <  2:466443/139‑1 (MQ=255)                                                         gAAACTCGTCACACGTCGCATGAACAATTCATACAACAAACCGCAGAAAGTTAGGCGGTAATTCGCAGCGGAGGATGTTCTCCGTATGCGAATATCATTCTCTGTGCTGGCGTGACGTTCTGAGGCCGTCATGGAAGCATTAc                                                                            <  2:614424/143‑1 (MQ=255)                                                           aaTTCGTTACACCACGCATGAACAATTCAAACAACAAACCGCAGAAAGTCAGGCGGTAATTCGCAGCGGAGAATGTTCTCCGTATGCGAATATCATTCTCTGTGCTGGCGTGACGTTCTGAGGCCGTCATGGAAGCATTACtt                                                                          <  1:158151/143‑1 (MQ=255)                                                             ttCGTTACACCACGCATGAACAATTCAAACAACAAACCGCAGAAAGTCAGGCGGTAATTCGCAGCGGAGAATGTTCTCCGTATGCGAATATCATTCTCTGTGCTGGCGTGACGTTCTGAGGCCGTCATGGAAGCATTACTTCa                                                                        <  2:782332/143‑1 (MQ=255)                                                              tCGTTACACCACGCATGAACAATTCAAACAACAAACCGCAGAAAGTCAGGCGGTAATTCGCAGCGGAGAATGTTCTCCGTATGCGAATATCATTCTCTGTGCTGGCGTGACGTTCTGAGGCCGTCATGGAAGCATTACTTCAg                                                                       <  2:296062/143‑1 (MQ=255)                                                                 ttACACCACGCATGAACAATTCAAACAACAAACCGCAGAAAGTCAGGCGGTAATTCGCAGCGGAGAATGTTGTCCGTATGCGAATATAATTCTCTGTGCTGGAGTGAAGTAATGAGGAAGTCGTGGAGGCATTACTTCAGCtt                                                                    >  1:326092/1‑143 (MQ=255)                                                                          gCATGATCTATTGAAACAACAAACGGCAGAAAGTCAGGCGGTAATTCGCAGCGGAGAATGTTCTCCGTATGCGAATATCATTCTCTGTGCTGGCGTGACGTTCTGAGGCCGTCATGGAAGCATTACTTCAGCTTAAAGGCATc                                                           <  2:417965/143‑1 (MQ=255)                                                                               aaCAATTCAAACGACAAACCGCAGAAAGTCAGGCGGTAATTCGCAGCGGAGAATGTCCTCCGTATGCGAATATCATTCCCTGTGCTGGCGTGACGTTCTGAGGCCGGCATGGAAGCATTACTTCAGCTTAAAGGCATCGATaa                                                      <  1:548338/143‑1 (MQ=255)                                                                               aaCAATTCAAACAACAAACCGCAGAAAGTCAGGCGGTAATTCGCAGCGGAGAATGTTCTCCGTATGCGAATATCATTCTCTGTGCTGGCGTGACGTTCTGAGGCCGTCATGGAAGCATTACTTCAGCTTAAAGGCATCGATaa                                                      >  1:194513/1‑143 (MQ=255)                                                                               aaCAATGCACACAACAAACCGCAGAAAGTCAGGCGGGAATTCGCGGCGGAGATTGTTCTCCGTATGCGAATATCATTCTCTGTGCTGGCGTAACGCTCTGAGGCCGTCATGGAAGCATTACTTCAGCTTAAAGGCATCGATaa                                                      <  2:515052/143‑1 (MQ=255)                                                                                aCAATTCAAACAACAAACCGCAGAAAGTCAGGCGGTAATTCGCAGCGGAGAATGTGCTCCGTATGCGAATATCATTCTCTGTGCTGGCGTGACGTTCTGAGGCCGTCATGGAAGCATTACTTCAGCTTAAAGGCATCGATaaa                                                     <  2:8006/143‑1 (MQ=255)                                                                                      cAAACAACAAACCGCAGAAAGTCAGGCGGTAATTCGCAGCGGAGAATGTTCTCCGTATGCGAATATCATTCTCTGTGCTGGCGTGACGTTCTGAGGCCGTCATGGAAGCATTACTTCAGCTTAAAGGCATCGCTAAAGCCTTc                                               >  1:156186/1‑143 (MQ=255)                                                                                        aactctgaaCTGCTGAAAGTCAGGCGGTAATTCGCAGCTGTGAAGTTTCTCTGTATGCGAATATCATTCTCTGTGCTGGCGTGAGGTTCGGAGGCCGTCATGGAAGCATTACTTCAGCTTAAAGGCATCGATAAAGCCTTccc                                             <  2:83252/136‑1 (MQ=255)                                                                                         acaacaAACCGCAGAAAGTCAGGCGGTAATTCGCAGCGGAGAATGTTCTCCGTATGCGAATATCATTCTCTGTGCTGGCGTGACGTTCTGAGGCCGTCATGGAAGCATTACTTCAGCTTAAAGGCATCGATAAAGCCTTCCCg                                            >  1:709638/1‑143 (MQ=255)                                                                                           aacaaACCGCAGAAAGTCAGGCGGTAATTCGCAGCGGAGAATGTTCTCCGTATGCGAATATCATTGCACGCCCCGGCGTGACGTTCTGAGGCCGTCATGGAAGCAGTACTTCAGCCTCAAGGCCTCGATCAAGCCTTCCCggg                                          >  2:475599/1‑143 (MQ=255)                                                                                           aacaaACCGCAGAAAGTCAGGCGGTAATTCGCAGCGGAGAATGTTCTCCGTATGCGAATATCATTCTCTGTGCTGGCGTGACGTTCTGAGGCCGTCATGGAAGCATTACTTCAGCTTAAAGGCATCGATAAAGCCTTCCCggg                                          >  1:212734/1‑143 (MQ=255)                                                                                              aaaCCGCAGAAAGTCAGGCGGTAATTCGCAGCGGAGAATGTTCTCCGTAtgcgaattaccgcctgactttctgcggtttgttgtttgaattgttcatgcgtggtgtaac                                                                         <  2:515736‑M2/109‑61 (MQ=255)                                                                                              aaaCCGCAGAAAGTCAGGCGGTAATTCGCAGCGGAGAATGTTCTCCGTAtgcgaattaccgcctgactttctgcggtttgttgtttgaattgttcatgcgtggtgtaac                                                                         >  1:515736‑M2/1‑49 (MQ=255)                                                                                                  cGCAGAAAGTCGGGGGGTAATGCGCAGCGGAGAATGTTCTCCGTATGCGAATATCATTCTCGGTGCTGGCGTGACGTTCTGAGGCCGTCATGGAAGCATTACTTCAGCTTAAAGGCATCGATAAAGCCTTCCCGGGCGTaaaa                                   <  2:80436/143‑1 (MQ=255)                                                                                                   gCAGAAAGTCAGGCGGTAATTCGCAGCGGAGAATGTTCTCCGTATGCGAATATCATTCTCTGTGCTGGCGTGACGTTCTGAGGCCGTCATGGAAGCATTACTTCAGCTTAAAGGCGTCGATAAAGCCTTCCCGGGCGTAAAAg                                  >  1:297253/1‑143 (MQ=255)                                                                                                     aGAAAGTCAGGCGGTAATTCGCAGCGGAGAATGTTCTCCGGATGCGAATATCATTCTCTGTGCTGGCGTGACGTTCTGCGGCCGTCATGGAAGCATTACTTCAGCTCAAAGGCATCGATAAAGCCTTCCCGGGCGTGAAGGcc                                >  2:235495/1‑143 (MQ=255)                                                                                                       agaGTCAGGCGGTAATTCGCAGCGGAGAATGTTCTCCGTATGCGAATATCATTCTCTGTGCTGGCGTGACGTTCTGAGGCCGTCATGGAAGCATTACTTCAGCTTAAAGGCATCGATAAAGCCTTCCCGGGCGTAAAAGCCct                              <  1:35792/141‑1 (MQ=255)                                                                                                                          cAGCGGAGAATGTTCTCCGTATGCGAATATCATTCTCTGTGCTGGCGTGACGTTCTGAGGCCGTCATGGAAGCATTACTTCAGCTTAAAGGCATCGATAAAGCCTTCCCGGGCGTAAAAGCCCTCTCGGGCGCAGCGTTAAAt           >  1:579955/1‑143 (MQ=255)                                                                                                                              ggAGAATGTTCTCCGTATGCGAATATCATTCTCTGTGCTGGCGTGACGTTCTGAGGCCGTCATGGAAGCATTACTTCAGCTTAAAGGCATCGATAAAGCCTTCCCGGGCGTAAAAGCCCTCTCGGGCGCAGCGTTAAATGTCt       >  2:221172/1‑143 (MQ=255)                                                                                                                                agaATGTTCTCCGTATGCGAATATCATTCTCTGTGCTGGCGTGACGTTCTGAGGCCGTCATGGAAGCATTACTTCAGCTTAAAGGCATCGATAACGCCTTCCCGGGCGTAAAAGCCCTCTCGGTCGCAGCGTTAAATGTCTAt     >  2:510469/1‑143 (MQ=255)                                                                                                                                 gaATGTTCTCCGTATGCGAATATCATTCTCTGTGCTGGCGTGACGTTCTGAGGCCGTCATGGAAGCATTACTTCAGCTTAAAGGCATCGATAAAGCCTTCCCGGGCGTAAAAGCCCTCTCGGGCGCAGCGTTAAATGTCTATc    >  1:113453/1‑143 (MQ=255)                                                                                                                                 gaATGTTCTCCGTATGCGAACATCATGCTCTGTGCTGGCGTGACGTGCTGAGGCCGTCATGGAAGCATTACTTCAGCTTAAAGGCATCGATAAAGCCTTCCCGGGCGTAAAAGCCCTCTCGGGCGCAGCGTTAAATGTCTATc    <  1:324508/143‑1 (MQ=255)                                                                                                                                  aaggTTCTCCGTATGCGAATATCATTCTCTGTGCTGGCGTGACGTTCTGAGGCCGTCATGGAAGCATTACTTCAGCTTAAAGGCATCGATAAAGCCTTCCCGGGCGTAAAAGTCCTTTCTGGCGCAGCGTTAAATGTCTATcc   <  2:478796/140‑1 (MQ=255)                                                                                                                                   aTGTTCTCCGTATGCGAATATCATTCTCTGTGCTGGCGTGACGTTCTGAGGCCGGCATGGAAGCATTACTTCAGCTTAAAGGCATCGAAAAAGCCTTCCCGGGCGTAAAAGCCCTCTCGGGCGCAGCGTTAAATGTCTATcgg  >  1:410086/1‑141 (MQ=255)                                                                                                                                              |                                                                                                                                    ACGAAACGTTGCTCACTCACCTTGAGCAGCTGCAAAAACACCAGGGAAATACCATTGAAATTCGTTACACCACGCATGAACAATTCAAACAACAAACCGCAGAAAGTCAGGCGGTAATTCGCAGCGGAGAATGTTCTCCGTATGCGAATATCATTCTCTGTGCTGGCGTGACGTTCTGAGGCCGTCATGGAAGCATTACTTCAGCTTAAAGGCATCGATAAAGCCTTCCCGGGCGTAAAAGCCCTCTCGGGCGCAGCGTTAAATGTCTATCCG  >  NC_000913/3933592‑3933864

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.