| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 386,844 | T→A | 11.4% | L213Q (CTG→CAG) | tauB → | taurine ABC transporter ATP binding subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 386,844 | 0 | T | A | 11.4% | 82.6 / 2.7 | 37 | L213Q (CTG→CAG) | tauB | taurine ABC transporter ATP binding subunit |
| Reads supporting (aligned to +/- strand): ref base T (16/15); new base A (2/2); total (19/18) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.05e-01 | |||||||||||
AGATGCAAACCCTGCTGCTGAAACTCTGGCAGGAGACGGGCAAGCAGGTGCTGTTGATTACCCACGATATAGAAGAAGCGGTGTTTATGGCGACTGAACTGGTTCTGCTTTCATCCGGCCCTGGCCGTGTGCTGGAGCGGCTGCCGCTCAACTTTGCTCGCCGCTTTGTTGCGGGAGAGTCGAGCCGCAGCATCAAGTCCGATCCACAATTCATCGCCATGCGCGAATATGTTTTAAGCCGCGTATTTGAGCAACGGGAGGCGTTCTCATGAGTGTG > NC_000913/386703‑386979 | aGATCCAAGCCCTGCTGCTGAAACTCTGGCAGGAGACGGGCAAGCAGGTGCTGTTGATTACCCACGATATAGAAGAAGCGGTGTTTATGGCGACTGAACTGGTTCTGCTTTCATCCGGCCCTGGCCGTGTGCTGGAGCGGCTg < 1:735328/143‑1 (MQ=255) gATGCAAACCCTGCTGCTGAAACTCTGGCAGGAGACGGGCAAGCAGGTGCTGTTGATTACCCACGATATAGAAGAAGCGGTGTTTATGGCGACTGAACTGGTTCTGCTTTCATCCGGCCCTGGCCGTGTGCTGGAGCGGCTGc < 1:608461/143‑1 (MQ=255) aaaCCCTGCTGCTGAAACTCTGGCAGGAGACGGGCAAGCAGGTGCTGTTGATTACCCACGATATAGAGGAGGCGGCGTTTATGGCGCCTGAACCTGCTCTGCGGTCGCCCGGCGCTGGCCGTGTGGTCGGGCGGCCCCCGCTc > 1:76666/1‑143 (MQ=255) aaCCCTGCTGCTGAAGCTCTGGCAGGAGACGGGCAAGCAGGTGCTGTTGACTACCCACGATATAGAAGAAGCGGTGTTTATGGCGACTGAACTGGTTCTGCTTTCATCCGGCCCTGGCCGTGTGCTGGAGCGGCAGCCGCTcc < 2:774962/143‑2 (MQ=255) aaCCCTGCTGCTGAAACTCTGGCAGGAGCCGGGCAAGCCGCCGCTGTTGATTACCCCCGAGATAGGAGAACCGGTGCTTCTGGCGACTCGACTGGCACCGGGGTCATCCGGCCCTTGCCGTGTGCTTGTGCACCTGCCGCTcc > 2:548292/1‑142 (MQ=255) tccTGCTGCTGAGCGGCTGTGAGGTGTCGGGCACGCGGGTGCTGTTGATTACCTACGATATAGAAGAAGCGGTGTTTATGGCGACTGACCTGGTTCTGCTTTCATCCGGCCCTGGCCGGGTGCTGGAGCGGCAGCCGCTccag < 2:687936/142‑4 (MQ=255) gcggAAACTCTGGCAGGAGACGGGCAAGCAGGTGCTGTTGATTACCCACGATATAGAAGAAGCGGTGTTTATGGCGACTGAACTGGTTCTGCTTTCATCCGGCCCTGGCCGTGTGCTGGAGCGGCTGCCGCTCAACTTTGCTc < 1:247333/140‑1 (MQ=255) tgAAACTCTGGCAGGAGACGGGCAAGCAGGTGCTGTTGATTACCCACGATATAGAAGACGCGGTGTTTATGGCGACTGAACTCGTTCCGCCCCCATCCGGCCCGGGCCGCGTGCTGGCGCGGCAGCCGCTCACCCtcgctcgc > 1:579151/1‑143 (MQ=255) cacgggCAGGACACGGGCAAGCAGGTGCTGTTGATTACCCGCGATATAGAAGATGCGGTGTTTATGGCGACTGAACTGGTTCTGCTTTCATCCGGCCCTGGCCGTGTGCTGGAGCGGCTGCCGCTCAACTTTGCTCGCCGCtt < 2:490422/139‑1 (MQ=255) ggggaCGGGCACGCAGGGTCTGTTGATGACCCACGATATAGAAGAAGCGGTGTTTATGGCGACTGAACTGGTTCTGCTTTCATCCGGCCCTGGCCGTGTGCTGGAGAGGCTGCCGCTCAACTGTGCTCGACGCTTTGTTGCgg < 2:112337/140‑1 (MQ=255) gagaCGGGCCAGCAGGTGCTGTTGATTACCCACGATATAGAACCAGCGGTGTTTCTGGCGACTGAACTCGCCCTGCTTTCACCCGGCCCTGGCCGCCTGCTGGCGCGGCTCCCCGACAACTATGCTCGCCGCTTCGTTGCgag > 2:288550/1‑141 (MQ=255) ggaCGGGCGAGCAGGTGCTGTTGATTACCCACGATATAGAAGAAGCGGTGTTTATGGCGACTGAACTGGTTCTGCTTTCATCCGGCCCTGGCCGTGTGCTGGAGCGGCTGCCGCTCAACTTTGCTCGCCGCTTTGTTGCGGga < 2:177325/142‑1 (MQ=255) gggCAAGCAGGTGCTGTTGATTACCCACGATATAGAAGAATCGGTGTTTATGGCGACTGAACTGGTTATGCTTTCGTCCGGCCCTGGCGGTGTGCTGCAGCGGCTGCCGCTCACCGTTGCTCGCCGATTGGTTGCGGgggact > 1:477176/1‑141 (MQ=255) cggcgCTCTTGATTACCCACGACATAGAAGAAGCGGTGTTTATGGCGACGGAACTGGTTCTGCTTTCATCCGGCCCTGGCCGTGTGCTGGAGCGGCTGCCGCTCAACTTTGCTCGCCGCTTTGTTGCGGGAGAGTCGAGCCgc < 1:410607/139‑1 (MQ=255) cTGTTGATTACCCACGATATAGAAGAAGCGGTGTTTATGGCGACTGAACTGGTTCTGCTTTCATCCGGCCCTGGCCGTGTGCTGGAGCGGCTGCCGCTCCACTTTGCTCGCCGCTTTGTGGGGGGAGAGGCGAGCCGCAGCAt > 1:342893/1‑143 (MQ=255) cTGTTGATTACCCACGATATAGAAGAAGCGGTGTTTATGGCGACTGAACTGGTTCTGCTTTCATCCGGCCCTGGCCGTGTGCTGGAGCGGCTGCCGCTCAACTTTGCTCGCCGCTTTGTTGCGGGAGCGGCGCGCCGCGGCAt > 2:526984/1‑143 (MQ=255) cTGTGGATTACCCACGATATAGAAGAAGCGGTGTTTATGGCGACTGAACTGGTTCTGCTTTCATCCGGCCCTGGCCGTGTGCTGGAGCGGCTGCCGCTCAACTTTGCTCGCCGCTTTGTTGCGGGAGAGTCGAGCCGCAGCAt < 1:543312/143‑1 (MQ=255) ttGATTACCCACGATATAGAAGAAGCGGTGTTTATGGCGACTGAACTGGTTCTGCTTTCATCCGGCCCTGGCCGTGTGCTGGAGCGGCTGCCGCTCAACTTTGCTCGCCGCTTTGTTGCGGGAGAGTCGAGCCgcagcggcca > 2:267103/1‑138 (MQ=255) gactACCCACGATATCGAAGAAGCGGTGTTTATGGCGCCTGACCTGGTTCTGCTTTCATCCGGCCCTCGCCGTGCACTGCAGCGGCTGCCGCTCAACTTTGCTCGCCGCTTTGTTGCGGGAGAGTCGAGCCGCAGCAGCaaat < 1:152740/140‑3 (MQ=255) cACGATATAGAAGAAGCGGTGTTTATGGCGACTGAACTGGTTCTGCTTTCATCCGGCCCTGGCCGTGTGCTGGAGCGGCTGCCGCTCAACTTTGCTCGCCGCTTTGTTGCGGGCGAGTCGAGCCGCAGCATCCAGTCCGCTcc > 1:472902/1‑143 (MQ=255) cGATATAGAAGAAGCGGTGTTTATGGCGACTGAACTGGTTCTGCTTTCATCCGGCCCTGGCCGTGTGCTGGAGCGGCTGCCGCTCAACTTTGCTCGCCGCTTTGTTGCGGGAGAGTCGAGCCGCAGCATCAAGTCCGATCcac < 1:267103/143‑1 (MQ=255) atatAGAAGAAGCGGGGTTTAGGGCGACTGAACTGGGTCGGCGTTCAGCCGGCCCTGGCCGTGCGCTGGAGCGGCGGCCGCTCAACTTTGCGCGCCGCTTTGTTGCGGGAGAGTCGAGCCGCAGCATCAAGTCCGATCCACaa < 1:82425/143‑1 (MQ=255) gaagaaGCGGTGTTTATGGCGACTGAACTGGTTCTGCTTTCATCCGGCCCTGGCCGTGTGCTGGAGCGGCTGCCGCTCAACTTTGCTCGCCGCTTTGTTGCGGGAGAGTCGAGCCGCAGCCTCAAGTACGATCCACGATTGAt > 1:212636/1‑143 (MQ=255) gtgtgtATGGCGGCTGAACTGGTTCTGCTTTCATCCGGCCCTGGCCGTGTGCTTGAGCGGCTGCCGCTCAACTTTGCTCGCCGCTTTGTTGCGGGAGAGTCGAGCCGCAGCATCAAGTCCGATCCACAATTCATCGCCATgcg < 2:72585/143‑1 (MQ=255) ttATGGCGACTGAACTGGTTCTGCTTTCATCCGGCCCTGGCCGTGTGCTGGAGCGGCTGCCGCTCAACTTTGCTCGCCGCTTTGTTGCGGGAGAGTCGAGCCGCAGCATCAAGTCCGATCCACAATTCATCGCCATGCGCGaa > 2:13313/1‑143 (MQ=255) cGACTGAACGGGTTCTGCTTTCATCCGGCCCTGGCCGTGTGCTGGAGCGGCTGCCGCTCAACCTTGCTCGCCGCTTTGTTGCGGGAGAGTCGAGCCGCAGCATCAAGTCCGATCCACAATTCATCGCCATGCGCGAATATGtt < 2:579151/143‑1 (MQ=255) gccTGCACTGGTTCTGCTTTCTTCCGGCCGTGGCCGTGTGCTGGAGCGGCTGCCGCTCAACTTTGCTCGCCGCTTTGTTGCGGGAGAGTCGAGCCGCAGCATCAAGTCCGATCCACAATTCATCGCCATGCGCGAATATGttt < 2:325294/141‑1 (MQ=255) aaCTGGTTCTGCTTTCATCCGGCCCTGGCCGTGTGCTGGAGCGGCTGCCGCTCAACTTTGCTCGCCGCTTTGTTGCGGGAGAGTCGAGCCGCAGCATCAAGTACGATCCACAATTCCTCGCCATGCGCGAATATGTTTTAAGc > 1:771548/1‑143 (MQ=255) gtgTTCTGCGTACATCCGGCCCTGGCCGTGTGCTGGAGCGGCTGCCGCTCAACTTTGCTCGCCGCTTTGTTGCGGGAGAGTCGAGCCGCAGCATCAAGTCCGATCCACAATTCATCGCCATGCGCGAATATGTTTTAAGCcgc < 1:646650/141‑1 (MQ=255) gTTCTGCTTTCATCCGGCCCTGGCCGTGTGCTGGAGCGGCTGCCGCTCAACTTTGCTCGCCGCTTTGTTGCGGGCGAGTCGAGCCGCAGCATCAAGTCCGATCCACAATTCATCGCCATGCGCGAACCGGTTTTAAGCcgcgg > 1:516856/1‑142 (MQ=255) cTGCTTTCATCCGGCCCTGGCCGTGTGCTGGAGCGGCTGCCGCTCAACTTTGCTCGCCGCTTTGTTGCGGGAGAGTCGAGCCGCAGCATCAAGTCCGATCCACAATTTATCGCCATGCGCGAATATGGTTTAAGCGGCGTGtt > 1:119335/1‑143 (MQ=255) tttCATCCGGCCCTGGCCGTGTGCTGGAGCGGCTGCCGCTCAACTTTGCTCGCCGCTTTGTTGCGGGAGAGTCGAGCCGCAGCATCAAGTCCGATCCACAATTCATCGCCATGCGCGAATATGTTTTAAGCCGCGGATTTGAg > 1:48315/1‑143 (MQ=255) ccGGCCCTGGCCGTGTGCTGGAGCGGCTGCCGCTCAACTTTGCTCGCCGCTTTGTTGCGGGAGAGTCGAGCCGCAGCATCAAGTCCGATCCACAATTCATCGCCATGCGCGAATATGTTTTAAGCCGCGCATCTGGGCAACgg > 2:83500/1‑143 (MQ=255) ggCCCTGGCCGTGTGCTGGAGCGGCTGCCGCTCAACTTTGCTCGCCGCTTTGTTGCGGGAGAGTAGAGCCGCAGCATCAAGTCCGATCCACAATTCATCGCCATGCGCGAATATGTTTTAAGCCGCGTATTTGAGCAACGGGa > 1:351802/1‑143 (MQ=255) cGTGTGCGGGAGCGGCTGCCGCTCAACTTTGCTCGCCGCTTTGTTCCGGGAGAGTCGAGCCGCAGCATCAAGTCCGATCCACAATTCATCGCCATGCGCGAATATGTTTTAAGCCGCGTATTTGAGCAACGGGAGGCGTtctc < 1:354590/143‑1 (MQ=255) ttgAGCGGCAGCCGCTCAACTTTGCTCGCCGCTTTGTTGCGGGAGAGTCGAGCCGCAGCATCAAGTCCGATCCACAATTCATCGCCATGCGCGAATATGTTTTAAGCCGCGTATTTGAGCAACGGGAGGCGTTCTCATGCgtg > 1:155787/3‑143 (MQ=255) gAGCGGCTGCCGCTCAACTTTGCTCGCCGCTTTGTTGCGGGAGAGTCGAGCCGCAGCATCAAGAACGAGGGACAATTCATCGCCATGCGCGACTATGTTTTAAGCCGCGTATTTGAGCTACGCGAGGCGTTCTCATGAGtgtg > 1:110758/1‑143 (MQ=255) | AGATGCAAACCCTGCTGCTGAAACTCTGGCAGGAGACGGGCAAGCAGGTGCTGTTGATTACCCACGATATAGAAGAAGCGGTGTTTATGGCGACTGAACTGGTTCTGCTTTCATCCGGCCCTGGCCGTGTGCTGGAGCGGCTGCCGCTCAACTTTGCTCGCCGCTTTGTTGCGGGAGAGTCGAGCCGCAGCATCAAGTCCGATCCACAATTCATCGCCATGCGCGAATATGTTTTAAGCCGCGTATTTGAGCAACGGGAGGCGTTCTCATGAGTGTG > NC_000913/386703‑386979 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |