New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	566777 =	NA (NA)	2538 (44.080)	271/278	0.0	97.5%	noncoding (1/1258 nt)	IS3	repeat region
	?	NC_000913	= 572471	67 (1.160)					coding (6/456 nt)	ybcN	DLP12 prophage; DNA base‑flipping protein

CGAAGATCGCAGAAATTAAAGCTAAGTTCGGACTGAAAGGAGCAAGTGTATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCC  >  NC_000913/566635‑566911                                                                                                                                               |                                                                                                                                       cGAAGATCGCAGAAATTAAAGCTAAGTTCGGACTGAAAGGAGCAAGTGTATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCt                                                                                                                                        <  1:740592/143‑1 (MQ=255)  gAAGATCGCAGAAATTAAAGCTAAGTTCGGACTGAAAGGAGCAAGTGTATGACGGGCAAAGAGGCAATTATTCCTTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTg                                                                                                                                       <  1:308964/143‑1 (MQ=255)  gAAGATCGCAGAAATTAAAGCTAAGTTCGGACTGAAAGGAGCAAGTGTATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCCACCGTACTCTg                                                                                                                                       >  1:856516/1‑143 (MQ=255)  gAAGATCGCAGAAATTAAAGCTAAGTGCGGACTGAAAGGAGCAAGTGTATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTg                                                                                                                                       <  1:309352/143‑1 (MQ=255)    ggagcgcgGAAATAGAAGCTAAGTTCGGACCGAAAGGAGCAAGTGTATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGAt                                                                                                                                     <  1:738833/139‑1 (MQ=255)    ggATCGCAGAAATTAAAGCAAAGTTCGGACTGAAAGGAGCAAGTGTATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGAt                                                                                                                                     <  1:1003578/142‑1 (MQ=255)    aGATCGCAGAGATTAAAGCTAAGTTCGGACTGAAAGGAGCAAGTGTATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGAt                                                                                                                                     <  2:1015705/143‑1 (MQ=255)         gCAGAAATTAAAGCTAAGTTCGGACTGAAAGGAGCAAGTGTATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAGCCGACACATGATCTTAc                                                                                                                                >  2:138120/1‑143 (MQ=255)          cAGAGAGTAAAGCTGAGGGCGGACTGAAAGGAGGAAGTGGATGCCGGGCAAAGAGGCAATTATGCATTCCCTGGGGACGCATAAGATCTTCTGTGCACAGGACGTTGCCGCGGTATCAGGCGCAACCGTAATCTGATCTTAct                                                                                                                               <  1:74261/143‑2 (MQ=255)           aGAAATTAAAGCTAAGTTCGGACTTAAAGGGGCAAGTGTATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTAccc                                                                                                                              <  2:601180/143‑1 (MQ=255)           aGAAATTAAAGCTAAGTTCGGACTGAAAGGAGCAAGTGTATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTAccc                                                                                                                              >  1:459184/1‑143 (MQ=255)                    aGCTAAGTTCGGACTGAAAGGAGCAAGTGTATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCGTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGt                                                                                                                     <  1:399771/143‑1 (MQ=255)                     gCTAAGTTCGGACTGAAAGGAGCAAGTGTAGGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTg                                                                                                                    <  2:449242/143‑1 (MQ=255)                     gCTAAGTTCGCGCTGGAAGGAGTAAGGGTATTACGGGCAGAGAGGCAATTATTCATTACCTGGGGACTCATAAGAGCTTCTGTGCACAGGACGTTTCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGtt                                                                                                                    <  2:186709/143‑2 (MQ=255)                      cTAAGTTCGGACTGAAAGGAGCAAGTGTATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTgg                                                                                                                   >  1:1024098/1‑143 (MQ=255)                      cTAAGTGCGGACTGAAAGGAGCAAGTGTATGACGGGCAAAGAGGCAATTACTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTgg                                                                                                                   <  2:946794/143‑1 (MQ=255)                           ttCGGACTGAAAGGAGCAAGTGTATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCACTAGTGGACAcg                                                                                                              >  2:380658/1‑143 (MQ=255)                           ttCGGACTGAAAGGAGCAAGTGTATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACACAGCAATACTGGACAcg                                                                                                              >  2:715726/1‑143 (MQ=255)                            tgggACGGAAAGGAGGAGTTGGAGGGCGGGCAAAGAGGCGATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATTTTACCCAGCAATAGTGGACAcgc                                                                                                             <  2:420214/141‑1 (MQ=255)                              ggACTGAAAGGAGCAAGTGTATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCgg                                                                                                           <  1:832565/143‑1 (MQ=255)                               gACTGAAAGGAGCAAGTGTATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGAACAAGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTAAACTTACCCAGCAATAATGGACAcgacgc                                                                                                          >  2:803938/1‑139 (MQ=255)                                tcTGGAAGGAGCAAGGGTATGACGGGGAAAGAGGCAATTATTCGTTACCTGGGGACGCATAAGAGCTTCAGCGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCt                                                                                                         <  2:806193/142‑1 (MQ=38)                                aCTGAAAGGAGCAAGTGTATGACGGGCAAAGAGGCACTTATTCATTACCTGGGGACGCATAAGAGCGTCTGTGCACAGGACGTGGCCGCGGTAACAGGCGCAACCGGAATCAGATCCTACCCACGCATAGCGGACAggcggca                                                                                                         >  2:32077/1‑142 (MQ=255)                                  tGAAAGGAGCAAGAGTATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTaa                                                                                                       <  1:495157/143‑1 (MQ=255)                                    aaaGGAGCAAGTGTATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCCGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGt                                                                                                     >  2:756898/1‑143 (MQ=255)                                      aGGAGCAAGTGTATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAGGTGa                                                                                                   >  1:408241/1‑143 (MQ=255)                                           cAAGTGTATGACGGGCAAAGAGGCAATTATTCAGTACGTTGTTGCTCATAAGAGCTTCTGTGCACAGGACGTTGTGGCGGTAACAGGCGCAACCGTAAGCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTaaa                                                                                              >  2:431054/1‑143 (MQ=37)                                                gtATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACtctc                                                                                         <  1:627778/143‑1 (MQ=255)                                                  aTGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACATTGCCGCGGTAACAGGCGCAACCGTAAACTGATCTTACCCAGCAATAAGGGACACGAGGATAAGTGAGTAAAcacacac                                                                                       >  2:145028/1‑137 (MQ=255)                                                        ggCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCagag                                                                                 <  1:845052/143‑1 (MQ=255)                                                               agGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTc                                                                          <  2:459184/143‑1 (MQ=255)                                                                 gCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTcac                                                                        >  2:165311/1‑143 (MQ=255)                                                                   agttatgCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACAt                                                                      <  1:139620/141‑1 (MQ=255)                                                                   aaTTATTCATTACCTGGGGATGCATAAGAGCTTTTGTGCACACGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACTCGCGGCTAAGTGAGTAAACTCTCAGTCAGATGTGACTCTCAt                                                                      >  1:1072071/1‑143 (MQ=25)                                                                   aaTTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATCGTGGACACGCGGCTAAGTGAGTAAACTCTCAGGCACAGATGACACACAt                                                                      >  1:390271/1‑143 (MQ=37)                                                                   aaTTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGCCTCACAt                                                                      >  1:383304/1‑143 (MQ=255)                                                                     ttattCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGa                                                                    <  1:634479/143‑1 (MQ=255)                                                                      tattCATTACCTGGGGACGCATAAGAGCTTCTGTGCACCGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGt                                                                               <  2:775903/131‑1 (MQ=255)                                                                      tattCATTACCTGGGGACGCATAAGAGCTTCTGTGCACCGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGt                                                                               >  1:775903/1‑131 (MQ=255)                                                                           aTTACCTGGGGACGCATAAGAGCTGCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACaaaaa                                                              <  2:1011845/143‑1 (MQ=255)                                                                            ggaCCTGGGGACGCATAAGAGCTTCTGTTCACAGGACGTTGCCGCGGTAACAGGCGCAATCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAAc                                                             <  2:944560/141‑1 (MQ=255)                                                                              gcagggggACGCAGAAGAGCGTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGAGCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAg                                                           <  2:944060/139‑1 (MQ=255)                                                                                cTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGGAATCTGGTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTGAACTCTCAGTCAGCGGTGCCTCACATGACcaagccggga                                                         >  1:101639/1‑136 (MQ=25)                                                                                    ggACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCaa                                                     >  2:841427/1‑143 (MQ=255)                                                                                       ctcATAATCGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTTATCTTACCCAGCAATAGTGGACACGCTGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCa                                                  <  1:719733/141‑1 (MQ=255)                                                                                         cATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAGAAACAGTATCAACCAGt                                                >  1:63186/1‑143 (MQ=255)                                                                                          aTAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTa                                               >  2:477131/1‑143 (MQ=255)                                                                                             agagCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTCAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCACCCAGTaaaa                                            >  1:518585/1‑143 (MQ=255)                                                                                                  ttCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAAccc                                       >  2:449598/1‑143 (MQ=255)                                                                                                   tCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAAcccc                                      <  2:1024098/143‑1 (MQ=255)                                                                                                      gtgCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAAGCAGAAAAAAACCCCGTa                                   >  2:136389/1‑143 (MQ=255)                                                                                                      gtgCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTa                                   <  2:908658/143‑1 (MQ=255)                                                                                                        ggacgggACGTTGGCGCGGTAACGGGCGCAGCCGTGAGCTGATCTTACCCAGCAATGGTGGGCACGCGGCTAAGTGAGTAAACTCTCAGCCAGAGGCGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTaaa                                 <  2:595247/138‑1 (MQ=14)                                                                                                          agaGGACGTTGCCGCTGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACACGGCGCAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACa                               <  1:349161/141‑1 (MQ=255)                                                                                                              gACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCAt                           >  2:1016556/1‑143 (MQ=255)                                                                                                                       gcgGTAACAGGGGTGAGCGTAAGCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGaa                  <  2:4553/143‑1 (MQ=11)                                                                                                                       gcgGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGaa                  <  1:380658/143‑1 (MQ=255)                                                                                                                            aaCAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGGGACTCACATGACAAAAACAGTATCAACCCGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCg             <  1:570894/143‑1 (MQ=255)                                                                                                                               aGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAg          >  1:966319/1‑143 (MQ=38)                                                                                                                               aGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGGAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACAAGTAAAAAACCCCG‑CAACAGCATTCGCCTGAATTTCGCAGt         >  2:848477/1‑143 (MQ=255)                                                                                                                               aGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGCGTGTAAACTATCAGTTATTGGGGACTCACATCACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAAGTTCGCAg          >  2:986871/1‑143 (MQ=11)                                                                                                                                cgcgcAACCTTAATCTGAGCTTACCCACCACTAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGATGAGAACGCTATGACGATAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGt         <  1:401034/142‑1 (MQ=11)                                                                                                                                   gcACCCGTAAACTGATCTTACCCAACAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGaa      <  2:101639/143‑1 (MQ=12)                                                                                                                                    cAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAg     >  2:473294/1‑143 (MQ=33)                                                                                                                                     aaCCGTAATCTGATCTTACCCAGCAATAGTCGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACCCACCTGACAAAAACAGTATCAACCAGTAAAAAACCCCGCAAACAGCATTCGCCTGAATTTCGCAGTGAAGc    >  2:650480/1‑143 (MQ=255)                                                                                                                                       ccGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGccc  >  1:208708/1‑143 (MQ=31)                                                                                                                                               |                                                                                                                                       CGAAGATCGCAGAAATTAAAGCTAAGTTCGGACTGAAAGGAGCAAGTGTATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCC  >  NC_000913/566635‑566911

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.