| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,450,384 | G→A | T48I (ACC→ATC) | rpsS ← | 30S ribosomal subunit protein S19 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,450,384 | 0 | G | A | 95.7% | 179.4 / NA | 72 | T48I (ACC→ATC) | rpsS | 30S ribosomal subunit protein S19 |
| Reads supporting (aligned to +/- strand): ref base G (1/1); major base A (34/33); minor base C (2/1); total (37/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CTTATTTCTTCTTCGCTTTTTTATCAGCAGCGTGGCCGCGATAAGTACGAGTCGGTGCGAATTCACCCAGTTTGTGACCAACCATTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCATGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCAGCAAGTGCAGGTCAATAAAAGGACCTTTCTTGAGAGAACGTGG > NC_000913/3450247‑3450523 | gtcgtttCTTCGTCGTTTTTTTATCAGCAGCGTTGCCGCGATGAGTATTAGTTGGTGTTAATTCAGTCATGGTGTGACCAACCATTTGGTCGGTTACAAATACCGAAACGTTCTGACTACCATTATGGACAGCGATGATCaaa < 2:124279/139‑1 (MQ=255)cTTATTTCTTCTTCGCTTTTTTATCAGCAGCGTGGCCGCGATAAGTACGAGTCGGTGCGAATTCACCCAGTTTGTGACCAACCATTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGATCaaa < 1:904381/143‑1 (MQ=255)cTTATTTCTTCTTCGCTTTTTTATCAGCAGCGTGGCCGCGATAAGTACGAGTCGGTGCGAATTCACCCAGTTTGTGACCAACCATTTCGTCGGTTACAAATACCGGAAAGTGCTGACGACCATTATGGACAGCGATGATCaaa > 2:299061/1‑143 (MQ=255)cTTATTCCTTCTTCGCTTTCTTATCAGCAGCGTGCCCGCCATAAGTACGAGTCGGTGCGAATTCACCCAGTTTGTGACCAACCATTTCTTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGATCaaa < 1:123700/143‑1 (MQ=255) ttATTTCTTCTTCGCTTTTTTATCAGCAGCGTGGCCGCGATAAGTACGAGTCGGTGCGAATTCACCCAGTTTGTGAGCAACCATTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGATCAAAc > 1:244587/1‑143 (MQ=255) ttATTTCTTCTTCGCTTTTTTATCAGCAGCGTGGCCGCGATAAGTACGAGTCGGTGCGAATTCACCCAGTTTGTGACCAACCATTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGATCAAAc > 2:330328/1‑143 (MQ=255) tttCTGCTTCGCTTTCTGCGCACCAGCGTGGCCGCGATAAGTACGAGTCGGTGCGAATTCACCCAGTTTGTGACCAACCATTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGATCAAACCGa < 1:219052/143‑1 (MQ=255) gcttcttcGCTTTTTTATCAGCAGCGTGGCCGCGATAAGTACGAGTCGGTGCGAATTCACCCAGTTTGTGACCAACCATTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGATCAAACCGATc < 1:380803/142‑1 (MQ=255) ttcttcGCTTTTTTATCAGCAGCGTGGCCGCGATAAGTACGAGTCGGTGCGAATTCGCCCAGTTTGTGACCGACCATTTCGTCGGTTACAAATCCCGGAACGTGCTGACGCCCAGTATGGACAGCGATGATCACACCGAGCAt > 1:232/1‑143 (MQ=255) cttcGCTTTTTTATCGGCAGCGTGGCCGCGATAAGTACGAGTCGGTGCGAATTCACCCAGTTTGTGACCAACCATTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGATCAAACCGATCATGt < 1:1053219/143‑1 (MQ=255) cttcGCTTTTTTATCAGCAGCGTGGCCGCGATAAGTACGAGTCGGTGCGAATTCACCCAGTTTGTGACCACCCATTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGATCAAACCGATCATGt < 2:986191/143‑1 (MQ=255) tcGCTTTTTTATCAGCAGCGTGGCCGCGATAAGTACGAGTCGGTGAGTATTCACCCAGAACGTGTTGGGGGGAATCAGCCAAAACAAATACCGGAACGCGCTGACGACCATCATGGACAGCGATGATCAAACCGATCATGTTa > 1:784287/1‑143 (MQ=255) cGCTTTTTTATCAGCAGCGTGGCCGCGATAAGTACGAGTCGGTACGAATTCACCCAGTTTGTGACCAACCATTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGATCCACCACATAATGTTAg > 2:462059/1‑143 (MQ=255) gCTTTTTTATCAGCAGCGTGGCCGCGATAAGTACGAGTCGGTGCGAATTCACCCAGTTTGTGACCAACCATTTCGTCGGTTACAAATACCGGCACGTGCTGACGACCCTTCTTGCCAGCGATGCTCCAACCGATCATGGTacg > 1:555037/1‑141 (MQ=255) gCTTTTTTATCAGCAGCGTGGCCGCGATAAGTACGAGTCGGTGCGAATTCACCCAGTTTGTGACCAACCATTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGCTGATCCTACCGCTCCTGTTTgg > 1:328655/1‑143 (MQ=255) cTTTTTTATCAGCAGCGTGGCCGCGATAAGTACGAGTCGGTGCGAATTCACCCAGTTTGTGACCAACCATTTCGTCGGTTACAAATACCGGAACGTGCCGACGACCATTATGGACAGCGATGATCAAACGGATCATGTTAGGa > 2:309385/1‑143 (MQ=255) gcagcGTGGCCGCGATAAGTACGAGTCGGTGAGGATTCACCCGGGTTGTGACCAACCATTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGATCAAACCGATCATGTTAGGAAAGATCGTTGa > 1:734912/1‑143 (MQ=255) gcGTGGCCGCGATAAGTCCGAGTCGGTGCGAATTCACCCAGTTTGTGCCCAACCATTTCGTCGGTTACAACTACCGGAACGTGCTGACGACCATTATGGCCAGCGATGATCCAACCGCTCCTGTTAGGCACGATCGTTGAacg > 1:363758/1‑143 (MQ=255) tGGCCGCGATAAGTACGAGTCGGTGCGAATTCACCCAGTTTGTGACCAACCATTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGATCAAACCGATCATGTTAGGAAAGATCGTTGAacgagg > 1:790801/1‑141 (MQ=255) gCCGCGATAAGTACGAGTCGGTGCGAATTCACCCAGTTTGTGACCAACCATTTCGTCGGTTACAAATACGGTAGGGTGCTGACGACCATTATGGACAGCGATGATCAAACCGATCATGTTAGGAAAGGTCGTTGAaagacgag > 1:672131/1‑141 (MQ=255) tgcgATTAGTACGATGCTGTGCGAATTCATCCAGTTTGTGATCACCCATTTCGTCGGTTACCAATAACGGAACGTGCTGACGACCATTATGGACAGCGATGCTCAAACCGTACATGTAAGGACAGTTCGTTGAACGACGGGAc < 2:534983/142‑1 (MQ=255) gATAAGTACGAGTCGGTGCGAATCCACCCAGTTTGTGACCAACCATTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGATCAAACCGATCATGTTAGGAAAGATCGTTGAACGACGGGACCaa < 1:766822/143‑1 (MQ=255) tACGCGTCCGTCCGAATTCACCCAGTTTGTGCCCAACCATTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGATCAAACCGATCATGTTAGGAAAGATCGTTGAACGACGGGACCAAGTgcgc < 1:12926/143‑1 (MQ=255) tACGAGTCGGTGCGAATTCACCCAGTTTGTGACCAACCATTTCGTCGGTAACAAATACCGGAACGTGCCGACGACCATTATGGACAGCGATGATCAAACCCAGAATGTTAGGAAAGATCATTGACCGCCGGGGCCAACAgcgc > 2:902937/1‑143 (MQ=255) tACGAGTCGGTGCGAATTCACCCAGTTTGTGACCAACCATTTCGTCGGGTACAAATACCGGAACGTGCTGGCGACCATTATGGACAGCGATGCTCCAACCGATCCTGTTCGGAAAGACCGTTGCACGGCGGGACCAAGTgcgc > 2:206100/1‑143 (MQ=255) tACGAGTCGGTGCGAATTCACCCAGTTTGTGACCAACCATGTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGATCAAACCGACCATGTTAGGAAACATCGTTGAACGACGGGACCCAGTgcgc > 2:789192/1‑143 (MQ=255) aCGAGTCGGTGCGAATTCACCCAGTTTGTGACCAACCATTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGATCAAACCGATCATGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCa > 1:236392/1‑143 (MQ=255) tCGGTGCGAATTCACCCAGTTTGTGACCAACCATTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGATCAAACCGATCATGTTAGGAAAGATCGTTGAACGACGGAACCAAGTGCGCAGGGGc > 1:880747/1‑143 (MQ=255) gTGCGAATTCACCCAGTTTGTGACGAACCATTTCGTCGGGTACAAATACCGGCACGTGCTGACAACCATGGTGGACAGCGATGATCAAACCGATCATGTTAGGAAGGGTCGTTGAACGACGTGCACACGTGCGCAAGGGctgc > 2:82185/1‑141 (MQ=255) gTGCGAATTCACCCAGTTTGTGACCAACAATTTCGCCGAGTACAATGGCCGGAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCATGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGcttc > 1:839590/1‑143 (MQ=255) gAATTCACCCAGTTTGTGACCAACCATTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGATCAAACCGATCATGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGt < 1:566739/143‑1 (MQ=255) aaTTCACCCAGTTTGTGACCAACCATTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTCTGGACAGCGATGATCAAACCGATCATGTTAGGAAAGATCGTTGGACGACGGGACCAAGTGCGCAGCGGCTTCTTGtc > 2:159323/1‑143 (MQ=255) aTTCACCCAGTTTGTGACCAACCATTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGATCAAACCGATCATGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGtct > 1:682354/1‑143 (MQ=255) tgacgcAGTTTGTTACCAACCATCTCGTCGGTTACAGATACCGGAACGTGCTGACGACCATTGTGGAGAGCGATGATCAAACCGGTCATGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTcc < 2:722005/138‑1 (MQ=255) cACCCAGTTTGTGACCAACCATTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGATCAAACCGATCATGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCg < 1:330328/143‑1 (MQ=255) aCCCAGTTTGTGACCAACCATTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGATCAAACCGATCATGTTAGGAAAGATCGTTGAACGACGGGACCAAGCGCGCAGGGGCTTCTTGTCTCGGc > 2:854840/1‑143 (MQ=255) aCCCAGTTTGTGACCAACCATTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCAGTATGGACAGCGATGATCAAACCGATCATGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGc > 1:363274/1‑143 (MQ=255) ccAGTTTGTGACCAACCATTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGATCAAACCGATCATGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCtt > 1:1030270/1‑143 (MQ=255) ttGTGACCAACCATTTCGTCGGTTACAAATACCGGAACATGCTCACGACCTTTATGGACAGCGATGATCAAACCGATCATGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCAc > 1:1017077/1‑143 (MQ=255) gtgtgACCAACCACTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGATCAAACCGATCATGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCAc < 2:850083/142‑1 (MQ=255) tgACCAACCATTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGATCAAACCGATCATGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGc > 1:567179/1‑143 (MQ=255) gACCAACCCTTTCGTCGGTTACACATACCGGAACGCCCTGACGAATGTCAGTGACAGCGATGATCAAACCGATCATGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCt < 1:39719/143‑1 (MQ=255) ccaaccaTTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGATCAAACCGATCATGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACAGCttt > 1:863076/1‑143 (MQ=255) accaTTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGATCAAACCGATCATGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTtctc > 2:558847/1‑143 (MQ=255) aTTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATGATGGACAGCGATGATCAAACCGATCATGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTAc < 1:432064/143‑1 (MQ=255) tcgTTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGATCAAACCGATCATGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACcttctt < 2:128772/143‑1 (MQ=255) tcgGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCATGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACcttctt < 1:652121/143‑1 (MQ=255) tcgGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGATCAAACCGATCATGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACcttctt > 2:540916/1‑143 (MQ=255) ggTTACAAATACCGGAACGGGCTGACGACCATTATGGACAGCGATGATCAAACCGATCATGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCa < 1:619090/143‑1 (MQ=255) aCAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGATCAAACCGATCATGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCGCCGCTTTCTCTACCTTCTTCAGCac > 2:586818/1‑142 (MQ=255) aaaTACCGGAACGTGCTGACGACCAGTATGGACAGGGATGATCAAACAGACCATGTTAGGAAAGATCGTTGAACCACGGGCCCAAGGACACAGGGGCCTCTGGTCTCCGCTATCCACGGCATTCTCTACAGTCTTCAGCAAGt > 1:952691/1‑143 (MQ=255) aaTACCGGAACGTGCTGACGACCATTATGGACAGCGATGATCAAACCGATCCTGTTAAGAAAGATCGTTGCACGACGGGACCAAGTGCGCAGGAGCTTCTTGTCTCCGCTTCCCACCGCTTTCCCTACCTTCTTCGGCacctg > 2:511557/1‑139 (MQ=255) tACCGGAACGTGCTGACGACCATTATGGACAGCGATGATCAAACCGATCATGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCAGCACGTGcc > 1:466286/1‑142 (MQ=255) cgcaaCGTGCTGACGACCATTATGGACAGCGATGATCAAACCGATCATGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCAGCAAGTGCAGGt < 1:988061/140‑1 (MQ=255) cGGAACGGGCCGACGACCATTATGGACAGCGATGATCAAACCGAGCATGTGAGGAAAGATCGTTGACAGACTACACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCAGCAAGTGCAGGt < 2:645673/143‑1 (MQ=255) gAACGTGCTGACGACCATTATGGACAGCGATGATCAAACCGATCATGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCAGCAAGTGCAGGTCa > 1:731057/1‑143 (MQ=255) aCGTGCTGACGACCATTATGGCCAGCGATGATCAAACCGATCATGTTAGGAACGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGGCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCAGCAAGTGCAGGTCAAt < 2:555037/143‑1 (MQ=255) cgcgCTGACGACCATTATGGACAGCGATGATCAAACCGATCATGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCAGCAAGTGCAGGTCAATa < 2:961640/140‑1 (MQ=255) tGCTGACGACCATTATGGACAGCGATGATCAAACCGATCATGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTATTCAGGAAGTGCAGCTCAATaaa > 2:259399/1‑143 (MQ=255) aggtGACGGGCATTATGGAGAGCGAGGAGCGAACCGATCATGTTAGGAAAGATCGTTGAACGACGGGACCACGTGCGCCGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCAGCAAGTGCAGGTCAATaaa < 1:613483/140‑1 (MQ=255) gCTGACGACCATTATGGACAGCGATGATCAAACCGGTCATGTCAGGAAAGATCGTTGAACGACGGGACCACGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCAGCAAGTGCAGGTCAATaaaa < 1:707286/143‑1 (MQ=255) gCTGACGACCATGATGGACAGCGATGATCAAACCGATCATGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCGTCTTCAGCAAGTGCAGGTCAATaaaa < 2:784287/143‑1 (MQ=255) aTTATGGACAGCGATGATCAATCCGATCATGGTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCAGCAAGTGCAGGTCAATAAAAGGACCTTTCt < 2:209745/143‑1 (MQ=255) ttATGGACAGCGATGATCAAACCGATCATGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCAGCAAGTGCAGGTCAATAAAAGGACCTTTCtt < 1:794486/143‑1 (MQ=255) ttATGGACAGCGATGATCAAACCGATCATGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCAGCAAGTGCAGGTCAATAAAAGGACCTTTCtt < 1:378309/143‑1 (MQ=255) ttACGGACAGCGATGATCAAACCGAGCATGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCGTCGTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCAGCAAGTGCAGGTCAATAAAAGGACCTTTCtt < 1:977699/143‑1 (MQ=255) tgaTGGACTGCGATGAGCGAACCGAGCATGTTAGGAAAGATCGTCGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCGCTACCTTCTTCAGCAAGTGCAGGTCAATAAAAGGACCTTTCtt < 2:193615/141‑1 (MQ=255) aTGGACAGCGATGATCAAACCGATCATGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCAGCAAGTGCAGGTCAATAAAAGGACCTTTCTTga < 1:547918/143‑1 (MQ=255) tGGACTGCGATGATCATACCGATCATGTTAGGAAAGATCGTTGAACGACGGGACCTAGTGCGTAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCAGCAAGTGCAGGTCAATAAAAGGACCTTTCTTgag < 1:535395/143‑1 (MQ=255) cGATGATCAAACCGATCATGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCAGCAAGTGCAGGTCAATAAAAGGACCTTTCTTGAGAGAACGt < 2:554995/143‑1 (MQ=255) cGATGATCAAACCGATCATGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCAGCAAGTGCAGGTCAATAAAAGGACCTTTCTTGAGAGAACGt > 1:233881/1‑143 (MQ=255) gatgatCAAACCGATCATGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCAGCAAGTGCAGGTCAATAAAAGGACCTTTCTTGAGAGAACGTg > 1:1010263/1‑143 (MQ=255) aTGATCAAACCGATCATGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCAGCAAGTGCAGGTCAATAAAAGGACCTTTCTTGAGAGAACGTgg < 1:374910/143‑1 (MQ=255) | CTTATTTCTTCTTCGCTTTTTTATCAGCAGCGTGGCCGCGATAAGTACGAGTCGGTGCGAATTCACCCAGTTTGTGACCAACCATTTCGTCGGTTACAAATACCGGAACGTGCTGACGACCATTATGGACAGCGATGGTCAAACCGATCATGTTAGGAAAGATCGTTGAACGACGGGACCAAGTGCGCAGGGGCTTCTTGTCTCCGCTTTCCACCGCTTTCTCTACCTTCTTCAGCAAGTGCAGGTCAATAAAAGGACCTTTCTTGAGAGAACGTGG > NC_000913/3450247‑3450523 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |