| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1207790 = | 2 (0.030) | 42 (0.780) | 37/250 | 0.3 | 97.9% | coding (290/630 nt) | ycfK | e14 prophage; protein StfP |
| ? | NC_000913 | 1209619 = | 0 (0.000) | pseudogene (37/537 nt) | stfE | e14 prophage; putative side tail fiber protein fragment | |||||
Only 100 of 111 total aligned reads displayed.
TGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATC‑AAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCC > NC_000913/1207649‑1207932 | aggtagaAGCATCCGGTCCCAGCCTGGGGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAAGCCGTTTGGCGATATC‑AAAGCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTT < 1:354353‑M1/142‑1 (MQ=255) tgcacagttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacaaagccaagaagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgtt < 1:305164‑M1/2‑1 (MQ=255) ggtggAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATC‑AAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTG > 2:155906‑M1/1‑143 (MQ=255) gggggaggCGTCCGGCGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTCCCGCACTTCGCGCGCTGCGGTTAAGCCGCAAGAATCCGTTTGGCGCTATC‑AGCTCGGCTGGCACTGTGCAAACGGCTCTCGAAAACCTTG < 1:799943‑M1/140‑1 (MQ=255) gtggAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATC‑AAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGG > 1:843779‑M1/1‑143 (MQ=255) cacagttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccagtaagcatgttaaatccccctggtacaagcaggaatgatgccactagcgtgttatttcttcattttcataaacgTTgg < 2:677829‑M1/4‑1 (MQ=255) tggcGTCCGGTGCCAGCGTGGAGAAGGGGCGGCACGACCAGTTAGTTCCCGCACCACACGCGGTGCTGTTGAGCCGCAAGAATCCGTTTGGCGATATC‑AAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTG < 2:1089612‑M1/142‑1 (MQ=255) aGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATC‑AAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTG < 1:875993‑M1/143‑1 (MQ=255) ggCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTCAACCCGCAAGAATCCGTTTGGCGATATC‑AAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGG < 2:469085‑M1/143‑1 (MQ=255) ttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccttttgcttgttatttcttcattttcataaacgTTGGTTTgg > 1:633570‑M1/135‑143 (MQ=255) ttcagcgcagtacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTgg > 1:591460‑M1/135‑143 (MQ=255) gCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATC‑AAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGG > 2:116055‑M1/1‑143 (MQ=255) aTCCGGGGCCAGCCGGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATC‑AAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAG < 1:114010‑M1/143‑1 (MQ=255) tCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATC‑AAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGA > 2:738783‑M1/1‑143 (MQ=255) gcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAg < 1:416009‑M1/15‑1 (MQ=255) ttacgttgtagctctgtgttctggtcatttgttgatacgcgtacatagccaatgagtatgttaaattcccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAg > 2:365849‑M1/126‑143 (MQ=255) gCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTCTGGCGATATC‑AAATCGCATGGCACTGTGCACACGGCTCTCGCAAACCTTGGATTCGGCGAACGcactgcc > 2:952959‑M1/1‑136 (MQ=255) ccTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATC‑AAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCGTGGTTTGGGAGAAGGctctgcat > 1:76940‑M1/1‑135 (MQ=255) tGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATGCGTTTGGCGATATC‑AAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcatta < 2:847266‑M1/143‑11 (MQ=255) gtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgctggttatttattcattttcataaaagTTGGTTTGGGGGAAGGAggaaaagt < 1:174911‑M1/25‑3 (MQ=255) agctgtgttgtggtcatttgttgatacgcgtacatagccaatcagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAAt > 1:444247‑M1/115‑143 (MQ=255) gagGTGCGGCACGACCAGTGACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATC‑AAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgt < 2:642223‑M1/142‑16 (MQ=255) ctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgtgatttctacattttaataaacgGTGGGTTGGGAGAAGGAGCAGAACTCAATgc < 1:367930‑M1/31‑1 (MQ=255) ggggCGGCACGACCAGTTTCTTACCGCACTTCGCGCGCTGGTGTTAAGCCGCAAGAATCCGTTTGGCGATATC‑AAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttg < 2:178648‑M1/143‑18 (MQ=255) tgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatctcttcattttcatatacgTTGGTTTGGGAGAAGGAGCAAAACTCAATgcagc < 1:811282‑M1/34‑1 (MQ=255) gcggcACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATC‑AAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGGAGGctctgcattacctgctggtg > 2:731989‑M1/1‑123 (MQ=255) cggcACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATC‑AAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgt < 1:92458‑M1/143‑22 (MQ=255) tctggtcatttgttgagacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAAc > 1:776101‑M1/107‑143 (MQ=255) gcACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATC‑AAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTCGGTTTGGGAGACGGatctgcattacctgttggttgcg > 2:922511‑M1/1‑120 (MQ=255) tggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACgg < 1:871708‑M1/39‑1 (MQ=255) tgggtatgtgttgatacgcttacatagcctatgatcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTTAATGCAGCAACgg > 2:59501‑M1/105‑143 (MQ=255) catttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgATGGTTTGGGAGCAGGGGCAAAACTCAATGCAGCAACGGCTAc < 2:1069961‑M1/43‑1 (MQ=255) tggtgatacgcgtacagagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTa > 1:82550‑M1/97‑143 (MQ=255) gtcacttaacgcACTTCGCGCTCTGCTGCTAAGCCGCAAGAATCCGTTTGGCGATATC‑AAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgt < 1:1063646‑M1/140‑33 (MQ=255) ttacttacCGCACTTCGCGCGCGGCGGTTAAGCCGCAAGAATCCGTTGGGCGATATC‑AAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtg < 1:257918‑M1/143‑34 (MQ=255) tgcgtaccgcaCTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTAGGCGATATC‑AAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtgg < 2:176891‑M1/139‑35 (MQ=255) acttacCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGACTCCGTTTGGCGATATC‑AAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggc < 1:894280‑M1/143‑36 (MQ=255) acttacCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATC‑AAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggc < 1:618777‑M1/143‑36 (MQ=255) gatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGAc > 1:779905‑M1/93‑143 (MQ=255) ttacCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAAGCCGCTTGGCGATATC‑AAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggcct > 1:264341‑M1/1‑106 (MQ=255) gccctgcgcgcgctgctgTTAACCGGCAAGAAGCCGTTTGGCGATATC‑AAATCGGATGGCACTGTGCAAACGGCTCTGGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagc < 1:352513‑M1/137‑43 (MQ=255) gCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATC‑AAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGCGAAGGcactgcattacctgttggttcccaggttccgcggccttcagc > 2:941019‑M1/1‑101 (MQ=255) acatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGtt < 2:1042206‑M1/60‑1 (MQ=255) ttCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATC‑AAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtatcccggttccgtggccttcagccact > 2:25133‑M1/1‑97 (MQ=255) tagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttctttcttcattttcataaacgATGGATTGGAAGAAGAAGCAAAACTCAATGCAGCAACAGATACATTAGGACGCACCGGATtcc < 1:380844‑M1/63‑2 (MQ=255) agccaataagcatgttagctccccctggtaaaaccagtaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCAt > 2:568741‑M1/80‑143 (MQ=255) cgcgcTGCTGTTGAGCCGCAAGAATCCGTTTGGCGATATC‑AAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgc < 2:195003‑M1/143‑51 (MQ=255) aataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCt > 1:910363‑M1/76‑143 (MQ=255) ctgTTAAGCCGCAAGAATCCGTTTGGCGATATCAAAATCGGATGGCCCTGTGCAACCGGCTCTCGAAAACCTTGGTTTGGGAGACGGAGCAAACCTCACTGCAGCACCGGCTACATTAGGACGCCCCGGTTTCATCGCTATAc > 1:832102/1‑143 (MQ=21) ggtTAAGCCGCAAGAATCCGTTTGGCGATATC‑AGATCGGATGGCACTGTGCAAACGGCTCTCGAGAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggc < 2:969383‑M1/142‑59 (MQ=255) aGCCGCAAGAATCCGTTTGGCGATATC‑AAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggct < 1:343223‑M1/143‑64 (MQ=255) cGCAAGAATCCGTTTGGCGATATC‑AAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccgtcagccactccgccaccaggcttgcgcaa > 2:809729‑M1/1‑77 (MQ=255) gccagaaTCCGGTTGGCGATATC‑AAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaa < 2:246518‑M1/140‑68 (MQ=255) atccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGAt > 1:714258‑M1/62‑143 (MQ=255) ccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCCCCGGTGTCATAGCTATACCGGTGATGATtggt < 1:841144‑M1/86‑1 (MQ=255) cctggtaaaagcacgaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTTAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtggtg > 1:1069961‑M1/57‑143 (MQ=255) ccGTTTGGCGATATC‑AAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctgactgaaatgcaatgg > 1:4248‑M1/1‑68 (MQ=255) taaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTAtt > 1:812543‑M1/52‑143 (MQ=255) ttGGCGATATC‑AAATCGGATGACACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgcc > 1:1034535‑M1/1‑64 (MQ=255) aaagcgggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCATAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGa > 2:296026‑M1/50‑143 (MQ=255) aaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGa > 1:130242‑M1/50‑143 (MQ=255) aaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGa > 2:345520‑M1/50‑143 (MQ=255) aggcaggatggatgccgtttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAGCTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAg > 2:1015368‑M1/49‑143 (MQ=255) aagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGGGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTACATAGCTATACGGGGTATGATTGGTGGCATTGAg < 2:605084‑M1/95‑1 (MQ=255) gATATC‑AAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgcttt < 1:535322‑M1/143‑85 (MQ=255) gtaatgatgcgatttgcttgttatttcttcattttcataaacgTTGGTGTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGTTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATc > 2:53812‑M1/44‑143 (MQ=255) tatC‑AAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgcttttt < 1:792849‑M1/143‑87 (MQ=255) gaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAGACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCa > 2:761442‑M1/43‑143 (MQ=255) gaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACAGGTTATGCAGGGAGGTATTGAGCAATCa < 2:832482‑M1/101‑1 (MQ=255) catc‑AAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgcttttt < 1:505175‑M1/142‑87 (MQ=255) c‑AAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctg < 1:738783‑M1/143‑90 (MQ=255) catgtcggcTGGCACTGTGCAAACGGCTCTCGGAAGCCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacagactggctgaagtgcaatggtgccgctttttctg < 2:680476‑M1/139‑90 (MQ=255) aaaTCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcactggtgccgctttttctac > 1:112949‑M1/1‑53 (MQ=255) ccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCAt < 2:866749‑M1/109‑1 (MQ=255) cGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaa < 1:116055‑M1/143‑95 (MQ=255) ttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGCGCAATCGGTAGTCATTCAGgggg < 1:92246‑M1/117‑1 (MQ=255) ttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGGATTGAGCAATCGGTAATAATTCAGTggg < 1:728479‑M1/117‑1 (MQ=255) cACTGTGCAAACGGCTCTCGAAACCCGTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagcccctccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacc < 2:661600‑M1/143‑102 (MQ=255) aCTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaataccc < 1:731989‑M1/143‑103 (MQ=255) aCTGTGCAAACGGCTCTCGAAAACCTTGGTTTGCGCAAAGGAGCAAAACTCAATGCAGCAACGGCTACCTTAGGACGCACCGGTTTCATAGCTATACCGGTTATGCTTGGCGGTATTGAGCAATCCGTAATCATCAACTgggg > 2:342861/1‑143 (MQ=255) aaaCGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgcagtgcaatggagccgctcttcctgctgaagaatacccggaaccg > 2:1066222‑M1/1‑34 (MQ=255) aaaCGGCTCTCGAAAACCTTGGCTTGGGAGAAGGctctgcattacctgtttgtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactg < 1:152166‑M1/143‑110 (MQ=255) ttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGc < 2:650257‑M1/127‑1 (MQ=255) ttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGGAATCATTCAGTGGGGGTGGAATGc < 1:229241‑M1/127‑1 (MQ=255) tcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGcc < 1:419904‑M1/128‑1 (MQ=255) tcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGcc < 1:695735‑M1/128‑1 (MQ=255) attttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGGGGAATGCCGc < 2:417704‑M1/130‑1 (MQ=255) ctctCGAAAACCTTGGTTTGGGAGAAGActctgcattacctgttggtatcccggttccgtggccttaagccactccgccaacaggctggctgaaatgcaatgatgcagctttttctgatgaagaatactcggaactggcaaag > 2:158263‑M1/1‑28 (MQ=255) tttcataaacgTTGGTTTGGGAGAAGGAGTAAAAGTCAATGCAGCAACGGCTACATTAGGACCCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCAGTCAGTGGGGGTGGAATGCCGCaa > 2:409716‑M1/12‑143 (MQ=255) tcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATTGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCaaaa < 1:39932‑M1/134‑1 (MQ=255) tcGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggct > 1:317452‑M1/1‑25 (MQ=255) ataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAGAAGc < 2:50156‑M1/136‑1 (MQ=255) caacCTTGGTTTGGGAGAAGGctccgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatc < 1:479277‑M1/142‑123 (MQ=255) aaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCAt < 1:618507‑M1/138‑1 (MQ=255) atgttGGTGGGGGAGGAGGAGTAAAACTCAATGCAGCGATGGATACATTAGTACGCATCGGTTTCATAGCTATATCGGTTATGATTGGTGGTATTGAGCAAGCAGTATTCATTCAGTGGGGTTGGAATGCCGCAAAAGCATCt < 2:757084/140‑1 (MQ=255) ccTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccga < 1:985715‑M1/143‑126 (MQ=255) ccTTGGTTGGGGAGAAGGctctgcattacctggtggtgtcccggttccgtggccttcagccactccgccaaccggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccga < 2:843779‑M1/143‑126 (MQ=255) gTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTCCTCATTCAGTCGCGGTGGAATGCCGCAAAAGCATCTGc < 1:463651‑M1/142‑1 (MQ=255) cTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaaccggctggctgaaatgcaatggtgccgctttttctgctgaacaatacccggaactggcaaaggcttatccgac > 2:531949‑M1/1‑17 (MQ=255) ttGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgaca > 1:915356‑M1/1‑16 (MQ=255) | TGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATC‑AAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCC > NC_000913/1207649‑1207932 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |