| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 566777 = | NA (NA) | 2589 (43.020) | 270/280 | 0.0 | 97.9% | noncoding (1/1258 nt) | IS3 | repeat region |
| ? | NC_000913 | = 572471 | 56 (0.920) | coding (6/456 nt) | ybcN | DLP12 prophage; DNA base‑flipping protein | |||||
Only 100 of 2726 total aligned reads displayed.
GAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTATCTGGAGGAGGGCAAATGCTTTCGCATGGTGCTTAAACCGTGGCGTGAGAAACGCAGTCTTTCCCAGAATGCAC > NC_000913/572329‑572613 | gAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAAC > 2:40731‑M2/1‑143 (MQ=255) caacTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGAGCTCTGCGGAGGGGAGTCGTGAACtta < 1:7481‑M2/143‑4 (MQ=255) cactCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgat > 1:1037405‑M2/2‑139 (MQ=255) aacTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgat > 1:879128‑M2/1‑139 (MQ=255) aacTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAAATCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgat > 1:1000437‑M2/1‑139 (MQ=255) cTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatct < 1:462257‑M2/143‑7 (MQ=255) tCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAAATCTGTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACATCTGCGGGGGGGGAGCGCGAACtggtctt < 1:137621‑M2/143‑8 (MQ=255) cGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTATGACCTCTGCGGAGGGGAAGCGCGAAAtgatcatac < 2:269551‑M2/143‑10 (MQ=255) ggTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAGTTCTTTGCATCTAGCGCTTGACCTCTGCGGACGGGCACCGTGCACcgatcttacc < 1:363162‑M2/143‑11 (MQ=255) ggTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacc > 2:674272‑M2/1‑133 (MQ=255) gTGACTTCTGCGCTAACCGGGGACGTTTATGCGCACATACAATCCCAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttaccc > 2:315599‑M2/1‑132 (MQ=255) tGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttaccca > 1:64312‑M2/1‑131 (MQ=255) tGACTTCTGCGCTAAACGGGGACGTTTACGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttaccca > 1:178592‑M2/1‑131 (MQ=255) gACTTTTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccag > 2:825210‑M2/1‑130 (MQ=255) gACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACGCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccag > 1:805696‑M2/1‑130 (MQ=255) ttCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaa < 2:56970‑M2/143‑17 (MQ=255) ttCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaa < 1:976533‑M2/143‑17 (MQ=255) cTGCTCTAAACGGGGACGTTTATGCGCACATACAATCCAATCTCGCTTCTCCCTTCACGGCCGCTAAAATGCACCTGCAATTCTTTGCATCTAGCGTTGGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaata > 1:998228‑M2/1‑125 (MQ=255) gcgcTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATGCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagt > 1:769837‑M2/1‑123 (MQ=255) cgcTCAACGGGGACGCTTATGCGCACATACAATCCCAACTCTCTTCTCCCTGCACAGGTGCAGAAATGCGCCTGCAATTCTTTGCATCTAGCGTTGGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccaccaatagtg > 2:243006‑M2/1‑122 (MQ=255) gcTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACTGCTGCACAAAAACACCAGAAATTCATTGCATCTAGCGATTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtgg < 1:705118‑M2/143‑23 (MQ=255) gcTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACttatcttactcagccctagtgg < 2:1066844‑M2/143‑23 (MQ=255) gcTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtgg > 2:630383‑M2/1‑121 (MQ=255) aaCGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacac < 1:933884‑M2/143‑27 (MQ=255) gggACGGTTATGCCCACATACAATCCACTCTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgattatacccagcaatagtggacacgcgg > 2:137667‑M2/1‑113 (MQ=255) ggACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggc < 1:1019721‑M2/143‑32 (MQ=255) gTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGCCCCCTGCCGAGGGGAAGCGTGAACtgatctcaccccgcaatcgtggacacgcggctaag < 1:1113802‑M2/143‑36 (MQ=255) gcACATACACCCCAACCGCTCTTCTCCCTTCACAGAATCAGAAATGCGCCTCCAATTCTGTGCATCTAGCGTTTGACCTCTGCGGAGGGTAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaa > 2:214946‑M2/1‑100 (MQ=255) gcACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttaccctgcaatagtggtcacgcggctaagtgagtaga < 1:588377‑M2/143‑44 (MQ=255) cacaTACAATCCAAACTCTCTTCTCCGTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACGTCTGCGGAGGGGAAGCGTGGACttatcttacccagcaatagtggacgcgcggccaagtgagacaac < 2:607905‑M2/143‑45 (MQ=255) acaTACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTCGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttaccgcgcaatagtggacaggcggccaagtgagtacaca < 2:894565‑M2/143‑46 (MQ=255) tACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctc > 2:474966‑M2/1‑95 (MQ=255) ccaATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctca > 1:788177‑M2/2‑94 (MQ=255) aCAATCCATCCTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctca > 2:171560‑M2/1‑94 (MQ=255) aCAATCCAAACTCTCTTCTCCCTTCACAGATGCGGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctca > 2:934429‑M2/1‑94 (MQ=255) aCAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctca > 2:549590‑M2/1‑94 (MQ=255) aCAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctca > 1:214791‑M2/1‑94 (MQ=255) aCAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctca > 1:84198‑M2/1‑94 (MQ=255) aCAAGCCATTCTCTCTTGTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctca > 2:1019980‑M2/1‑94 (MQ=255) aaTACAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACATGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGCAGCGTGAACtgatcttacccagcaatagtgcacacgcggctaagtgagtaaactctcagt < 2:977572‑M2/143‑52 (MQ=255) aTCCAACCTCTCTCCCCCCCTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTAGACCTCGGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtc > 1:105697‑M2/1‑91 (MQ=255) aTCCAAACTCTCTTCTCCCTTCACAGATGGAACAATACACATGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTAAACtggtattacccatcaatagcggacacgcggctaagtgagtaacctcacagtc < 2:918084‑M2/143‑53 (MQ=255) tCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtca > 2:422742‑M2/1‑90 (MQ=255) caatcgttcttctcccgtcaCAGATGCAGAAATGCACCGGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcaga > 2:648537‑M2/8‑88 (MQ=255) cAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcaga > 2:156706‑M2/1‑88 (MQ=255) cAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcaga < 1:234926‑M2/143‑56 (MQ=255) cAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcaga > 1:677649‑M2/1‑88 (MQ=255) aaaCTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagag > 1:961217‑M2/1‑87 (MQ=255) aaaCTCGCTCCTCCCTTCTCAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagag > 2:721401‑M2/1‑87 (MQ=255) ttctCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactca < 1:517387‑M2/143‑65 (MQ=255) cccccttCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcaca > 1:478757‑M2/3‑77 (MQ=255) ttccttCACTGGTGCTGTAATGCTCCTGTAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGTAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgacttacat > 2:1043967‑M2/3‑76 (MQ=255) gtccttCACAGATGCAGAAATGCTCCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagctatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacat > 2:738182‑M2/3‑76 (MQ=255) cccTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatg > 1:727950‑M2/1‑75 (MQ=255) ccTTTACAGATGCGGAAATGCACCTGGAATTCTTTGCATCTAGCGTTTGTCCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatga > 2:292540‑M2/1‑74 (MQ=255) ttCACACATGCAGACATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgaca > 1:324778‑M2/1‑72 (MQ=255) aGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaac > 1:860529‑M2/1‑67 (MQ=255) aGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGAAAGCGTGAACtgatcttacccagcactagtggccacgcggctaagtgagtacactctcagtcagaggtgacacacagggcaaagaa < 1:193937‑M2/143‑77 (MQ=255) aGAAGCAAATATTCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaac > 2:380698‑M2/1‑67 (MQ=255) tGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagt < 2:33947‑M2/143‑80 (MQ=255) tGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGCTTGTACTCTTCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagt > 2:787797‑M2/1‑64 (MQ=255) gtagaAATGCACCTGCAATTCTCTGCATCTAGCGTTAGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacaagcggataaaaaatgaaactctcagtcagaggtgactcacatgacaaaaacagta > 2:498886‑M2/3‑63 (MQ=255) cAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacacaaaaagtat < 1:121257‑M2/143‑82 (MQ=255) aGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGCACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgacgcacatggcaaaaacaggatc < 1:1089907‑M2/143‑83 (MQ=255) aGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatc < 1:272516‑M2/143‑83 (MQ=255) gAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtataa > 2:765135‑M2/1‑60 (MQ=255) aaaTGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaa < 2:45823‑M2/143‑85 (MQ=255) aaTGCACCTGGCAGTGTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaac > 2:696080‑M2/1‑58 (MQ=255) aaTGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaattgtgggcagggtgctgagtgagtaaactctcagtcagaggtgagtcacatgacaaaaacagtattaac < 1:256125‑M2/143‑86 (MQ=255) aaTGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaac > 1:399956‑M2/1‑58 (MQ=255) aTGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagagacgactcacacgacacacacagtatcagcc < 2:521039‑M2/143‑87 (MQ=255) tGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtcatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaacaacagtatcaaccagtaaaa < 2:590275‑M2/143‑94 (MQ=255) cAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaa > 1:292339‑M2/1‑48 (MQ=255) tttttgcATCTATCGTTTGACCTCGGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaacccc > 1:919526‑M2/3‑44 (MQ=255) tCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaacccc > 2:356687‑M2/1‑44 (MQ=255) tttGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtagcaacccggaaaaaaccccgg < 1:307793‑M2/143‑102 (MQ=255) gCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaa > 1:552478‑M2/1‑39 (MQ=255) tCTAGCCTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacag > 2:1121390‑M2/1‑36 (MQ=255) cTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaacaccccgtaaacagc < 1:439600‑M2/143‑109 (MQ=255) tttGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgc > 1:344710‑M2/1‑29 (MQ=255) ttGACCTCTGCGGCGGGGAAGCGTGAACtgatcttacccagcaatcgtggacccgcggctacgtgagtaaactctcagtcagaggtgactcacatgccaacaacagtatcaaccagtaaacaaccccgtaccccgcattcgcc < 2:873704‑M2/143‑116 (MQ=255) tGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcagtagtggacacgcggcgaagtgagtaaactctcagtcagaggtgactcccatgacaaaaacagtatcaaccagtacaaaaccccgtaaacagcactcgcct < 2:1095702‑M2/143‑117 (MQ=255) tGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcct > 1:541310‑M2/1‑27 (MQ=255) tGACCGCTGCGGAGGGGAAGCGTGAACtgagcttacccagcaatagtgggcactcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcct > 2:186311‑M2/1‑27 (MQ=255) ccgcggcggagGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaa > 1:497022‑M2/6‑24 (MQ=255) ctctGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaat > 1:896052‑M2/1‑23 (MQ=255) tctGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatt < 1:622293‑M2/143‑122 (MQ=255) tctGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatg < 1:66138‑M2/143‑122 (MQ=255) gCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgtatcacattacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcg > 1:419913‑M2/1‑19 (MQ=255) ggAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgca > 1:15678‑M2/1‑17 (MQ=255) gagaGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgaggacactctcagtccgaggtcactcacataacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcac < 2:84967‑M2/143‑128 (MQ=255) gAGGGGAAGCGTGAACtgatcttacccagcaatagtggccacgcgcctaagtgtgtaagctctcagtcagacgtgactcacatgacaaaaacagtatcaaccagcaaaaaaccccgtaaacagccttcgcctgaatttcgcag < 2:442757‑M2/143‑128 (MQ=255) gAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcag < 1:605437‑M2/143‑128 (MQ=255) aGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagt > 1:56970‑M2/1‑15 (MQ=255) gggAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgccgtga < 2:808263‑M2/143‑131 (MQ=255) gAAGCGTGAACtgcccctccccagcactagtggacacgcggctaagtgagcaaactctcagtcagaggtcactcacatgacaaacacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctaaatttcgcagtgaag > 1:380420‑M2/1‑11 (MQ=255) gAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaag > 1:1076765‑M2/1‑11 (MQ=255) aGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaagcc > 1:950343‑M2/1‑9 (MQ=255) gAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaacttcgcagggaagccctgaa < 2:953767‑M2/143‑140 (MQ=255) ctgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaagccctgaagct > 1:825687‑M2/1‑1 (MQ=255) | GAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTATCTGGAGGAGGGCAAATGCTTTCGCATGGTGCTTAAACCGTGGCGTGAGAAACGCAGTCTTTCCCAGAATGCAC > NC_000913/572329‑572613 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |