Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	1209603	1209618	16	54 [0]	[0] 49	stfE	e14 prophage; putative side tail fiber protein fragment

GTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCA  >  NC_000913/1209477‑1209759                                                                                                                                               |                                                                                                                                             gcagatgcttttgcggcattccaccgcgactgaatgaggactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaac                                                                                                                                              <  1:463651‑M2/1‑1 (MQ=255)     atgcttttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGttt                                                                                                                                          <  1:618507‑M2/5‑1 (MQ=255)       gcttctgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTAt                                                                                                                                        <  2:50156‑M2/7‑1 (MQ=255)         ttttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagcaatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGa                                                                                                                                      <  1:39932‑M2/9‑1 (MQ=255)           ttgcggcattccacccccactgactgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgggtcctaatgtagccgttgctgcattgacttttactccttctcccaaaccaaCGTTTATGaaa                                                                                                                                    >  2:409716‑M2/133‑143 (MQ=255)             gcggcattccccccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAAt                                                                                                                                  <  2:417704‑M2/13‑1 (MQ=255)               ggcattccacccccactgactgattactgattgcccaataccaccactcataaccggtatagctctgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTGCGAAACTga                                                                                                                                >  1:398408‑M2/129‑143 (MQ=255)               ggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATga                                                                                                                                <  1:419904‑M2/15‑1 (MQ=255)               ggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATga                                                                                                                                <  1:695735‑M2/15‑1 (MQ=255)                gcattccacccccactgaatgattcctgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATgaa                                                                                                                               <  1:229241‑M2/16‑1 (MQ=255)                gcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATgaa                                                                                                                               <  2:650257‑M2/16‑1 (MQ=255)                          ccccctgaatgactaccgattgcgcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACaa                                                                                                                     <  1:92246‑M2/26‑1 (MQ=255)                          cccactgaattattaccgattgctcaatcccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACaa                                                                                                                     <  1:728479‑M2/26‑1 (MQ=255)                                  atgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATgg                                                                                                             <  2:866749‑M2/34‑1 (MQ=255)                                          tgattgctcaatacctccctgcataacctgtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTc                                                                                                     <  2:832482‑M2/42‑1 (MQ=255)                                          tgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagtcttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTc                                                                                                     >  2:761442‑M2/102‑143 (MQ=255)                                           gattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtaaccgttgctgcattgagttttgctccttctcccacaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATCGCATcattac                                                                                                    >  2:53812‑M2/101‑141 (MQ=255)                                                ctcaatgccaccaatcataccccgtatagctatgtaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttcccccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCtt                                                                                               <  2:605084‑M2/48‑1 (MQ=255)                                                ctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagctttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAACGGCATCCATCCtgcct                                                                                               >  2:1015368‑M2/96‑141 (MQ=255)                                                 tcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCttt                                                                                              >  1:130242‑M2/95‑143 (MQ=255)                                                 tcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCttt                                                                                              >  2:345520‑M2/95‑143 (MQ=255)                                                 tcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttatgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCCGCttt                                                                                              >  2:296026‑M2/95‑143 (MQ=255)                                                   aataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTa                                                                                            >  1:812543‑M2/93‑143 (MQ=255)                                                        caccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattaagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCGTGCTTTTACCAgg                                                                                       >  1:1069961‑M2/88‑143 (MQ=255)                                                         accaatcatcaccggtatagctatgacaccggggcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAggg                                                                                      <  1:841144‑M2/57‑1 (MQ=255)                                                             atcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGAt                                                                                  >  1:714258‑M2/83‑143 (MQ=255)                                                                           agctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTAtt                                                                    >  1:910363‑M2/69‑143 (MQ=255)                                                                               atgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTACTGGTTTTACCAGGGGGAGCTAACATGCTTATTGGCt                                                                >  2:568741‑M2/65‑143 (MQ=255)                                                                                ggaatccggtgcgtcctaatgtatctgttgctgcattgagttttgcttcttcttccaatccatCGTTTATGAAAATGAAGAAAGAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTa                                                               <  1:380844‑M2/80‑1 (MQ=255)                                                                                   aaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGt                                                            <  2:1042206‑M2/83‑1 (MQ=255)                                                                                            gtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATc                                                   >  1:779905‑M2/52‑143 (MQ=255)                                                                                             tcctaatgtagccgttgctgcaatgaatttgtctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCCTTCCTGCTTTTACCAGGGGGATGTAACATGCTTATTGGCTCTGTACGCGtatgc                                                  >  2:980637‑M2/51‑141 (MQ=255)                                                                                                taatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTCTGTACGCGTATcacca                                               >  1:82550‑M2/48‑143 (MQ=255)                                                                                                    gtagccgttgctgcattgagttttgcccctgctcccaaaccatCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATg                                           <  2:1069961‑M2/100‑1 (MQ=255)                                                                                                        ccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCa                                       <  1:871708‑M2/104‑1 (MQ=255)                                                                                                        ccgttgctgcattaagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGATCATAGGCTATGTAAGCGTATCAacacataccca                                       >  2:59501‑M2/40‑138 (MQ=255)                                                                                                          gttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTCTCAACAAATGACCAGa                                     >  1:776101‑M2/38‑143 (MQ=255)                                                                                                             gctgcattgagttttgctccttctcccaaaccaaCGTATATGAAAATGAAGAGATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAaca                                  <  1:811282‑M2/109‑1 (MQ=255)                                                                                                                gcattgagttctgctccttctcccaacccacCGTTTATTAAAATGTAGAAATCACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAg                               <  1:367930‑M2/112‑1 (MQ=255)                                                                                                                  attgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTGATTGGCTATGTACGCGTATCAACAAATGACCACAACAcagct                             >  1:444247‑M2/30‑141 (MQ=255)                                                                                                                      acttttcctccttcccccaaaccaaCTTTTATGAAAATGAATAAATAACCAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTAc                         <  1:174911‑M2/118‑1 (MQ=255)                                                                                                                             ctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGAATTTAACATACTCATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGAGCTACAACGTaa                  >  2:365849‑M2/19‑143 (MQ=255)                                                                                                                                cttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATgc               <  1:416009‑M2/128‑1 (MQ=255)                                                                                                                                      ccaaccccaCGTTTATGAAAATGAAGACATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGaa         <  1:838280‑M2/134‑1 (MQ=255)                                                                                                                                      ccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTACTGCGCTGaa         >  1:591460‑M2/10‑143 (MQ=255)                                                                                                                                      ccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAAAGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGaa         >  1:633570‑M2/10‑143 (MQ=255)                                                                                                                                           ccaaCGTTTATGAAAATGAAGAAATAACACGCTAGTGGCATCATTCCTGCTTGTACCAGGGGGATTTAACATGCTTACTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACtgtg    <  2:677829‑M2/139‑1 (MQ=255)                                                                                                                                            caaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGc   <  1:924993‑M2/140‑1 (MQ=255)                                                                                                                                             aaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTCTTGGCTTTGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCa  <  1:305164‑M2/141‑1 (MQ=255)                                                                                                                                               |                                                                                                                                             GTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCA  >  NC_000913/1209477‑1209759

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑