New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4171445	2 (0.070)	4 (0.150)	4/258	NT	67.2%	noncoding (2805/2904 nt)	rrlB	23S ribosomal RNA
	?	NC_000913	= 4212832	NA (NA)					noncoding (2790/2904 nt)	rrlE	23S ribosomal RNA

AATGCGGAAGAGATAAGTGCTGAAAGCATCTAAGCACGAAACTTGCCCCGAGATGAGTTCTCCCTGACCCTTTAAGGGTCCTGAAGGAACGTTGAAGACGACGACGTTGATAGGCCGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATGAGAGAAGATTTTCAGC  >  NC_000913/4171366‑4171587                                                                                |                                                                                                                                               aaggCGGCAGAGACAGGGGCGGAAAGCATCCAAGACCGAAACTGGCCCGGAGATGAGTTCTCCCTGACCCTTTAAGGGTCCTGAAGGAACGTTGAAGACGACGACGTTGATAGGCCGGGTGTGTAAGCGCAGCGATGCGTTGa                                                                                 <  1:203262/140‑1 (MQ=1)                               tAAGCACGAAACTTGCCCCGAGATGAGTTCTCCCTGACCCTTTAAGGGTCagggagaactcatctcggggcgcgtttcgtgcttagatgctttcagcacttatctcttccgcatttagctacagggcagtgccactggcatga                                                   >  2:204631‑M1/1‑50 (MQ=255)                                                        aggtctcCCTGACCCTTTAAGGGTCCTGAAGGAACGTTGATGACGACGACGTTGATAGGCTGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGtttt                          <  2:181243/140‑1 (MQ=0)                                                                cTGACCCTTTAAGGGTCagggagaactcatctcggggcaagtttcgtgcttagatgctttcagcacttatctcttccgcatttagctaccgggcagtgccattggcatgacaacccgaacaccagtgatgcgtccactccggt                  >  2:120576‑M1/1‑17 (MQ=255)                                                                    cccTTTAAGGGTCagggagaactcatctcggggcaagtttcgtgcttagatgctttcagcacttatctcttccgcatttagctaccgggcagtgccattggcatgacaacccgaacaccagtgatgagtccgctccggtcctc              >  1:325715‑M1/1‑13 (MQ=255)                                                                      gtttaAGGGTCaggtggatctctcctcggcgcaagtttcgtgcttagatgctctcagcacttatctcttccgcatttcgctaccgggcagtgccattggcatgacaacccgaacaccagtgatgcgttcactccggtcctctc            <  2:797‑M1/142‑133 (MQ=255)                                                                          aaGGGTCagggagaactcatctcggggcaagtttcgtgcttagatgctttcagcacttatctcttccgcatttcgctaccgggcagtgccattggcatgacaacccgaacaccactgatgcgtccacaccggccctctcctac        >  2:395128‑M1/1‑7 (MQ=255)                                                                          aaGGGTCagggagaactcatctcggggcaagtttcgtgcttagatgctttcagcacttatctcttccgcatttagctaccgggcagtgccattggcatgacaacccgaacaccagtgatgcgtccactccggtcctctcgtac        <  1:106193‑M1/143‑137 (MQ=255)                                                                             attcagcgagacctcctctcggggcaagtttcctgcctagatgctttcctcacttatctcttccgcattcagcctccgcgcagtgccattggcatgccaacccgaacaccagtgatgcgtccactccggtcctctcgtactag     <  2:533896‑M1/141‑140 (MQ=255)                                                                               tCagtgcgacctcatctcggggcaagtttcgtgcttagatgctttcagcacttatctcttccgcatttggctaccgggcagtgccattggcatgacaacccgaacaccagtgatgcgtccactccggtcctctcgtactagga   <  2:228959‑M1/143‑142 (MQ=255)                                                                               tCagggagacctcatctcggggcaagtttcgtgcttagatgctttcagcacttatctcttccgcatgtagctaccgggcagtgccattggcatgacaacccgaacaccagtgatgcgtccactccggtcctctcgtactagga   <  1:278656‑M1/143‑142 (MQ=255)                                                                               tCagggagaactcatctcggggcaagtttcgtgcttagatgctttcagcacttatctcttccgcatttagctaccgggcagtgccattggcatgacaacccgaacaccagtgatgcgtccactccggtcctctcgtactagga   <  1:507286‑M1/143‑142 (MQ=255)                                                                               tCagggagaactcatctcggggcaagtttcgtgcttagatgctttcagcacttatctcttccgcatttagctaccgggcagtgccattggcatgacaacccgaacaccagtgatgcgtccactccggtcctctcgtactagga   <  2:191279‑M1/143‑142 (MQ=255)                                                                               tCagggagaactcatctcggggcaagtttcgtgcttagatgctttcagcacttatctcttccgcatttagctaccgggcagtgccattggcatgacaacccgaacaccagtgatgcgtccactccggtcctctcggactagga   >  1:32056‑M1/1‑2 (MQ=255)                                                                               tCagggagaactcatctcggggcaagtttcgtgcttagatgctttcagcacttatctcttccgcatttagctaccgggcagtgccattggcatgacaacccgaacaccagtgatgcgtccactccgggcctctcgtactagga   >  2:258914‑M1/1‑2 (MQ=255)                                                                               tCagggagaactcatctcggggcaagtttcgtgcttagatgctttcagcacttatctcttccgcatttagctaccgggcagtgccattggcatgacaacccgaacaccagcgctgcgtacactcccgccctctcgtaccagga   >  1:225792‑M1/1‑2 (MQ=255)                                                                               tCagggagaactcatctcggggcaagtttcgtgcttagatgctttcagcacttatctcttccgcatttagctaacgggcagtgccattgccatgacaacccgaacaccagtaactccaccactccggtcctctcgtactagca   >  2:476166‑M1/1‑2 (MQ=255)                                                                               tCagggagaactcatctcggggcaagtgtcgtgcttagatgctttcagcacttatctcttccgcatttagctaccgggcagtgccattggcatgacaacccgaacaccagtgatgcgtccactccggtcctctcgtactagga   <  2:345162‑M1/143‑142 (MQ=255)                                                                               ccagggcgaactcgtctcggggcaagtttcgtgcttagatgctttcagcacttatctcttccgcatttagctaccgggcagtgccattggcatgacaacccgaacaccagtgatgcgtccactccggtcctctcgtactagga   <  1:206879‑M1/142‑142 (MQ=255)                                                                                cagggagaactcatctcggggcaagtttcgtgcttagatgctttcagcacttatctcttccgcatttagctaccgggcagtgccattggcatgacaacccgaacaccagtgatgcgtccactccggtcctctcgtactaggag  <  2:224779‑M1/143‑143 (MQ=255)                                                                                |                                                                                                                                               AATGCGGAAGAGATAAGTGCTGAAAGCATCTAAGCACGAAACTTGCCCCGAGATGAGTTCTCCCTGACCCTTTAAGGGTCCTGAAGGAACGTTGAAGACGACGACGTTGATAGGCCGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATGAGAGAAGATTTTCAGC  >  NC_000913/4171366‑4171587

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.