| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2493119 | 27 (0.970) | 4 (0.150) | 4/248 | NT | 13.0% | coding (136/1251 nt) | frc | formyl‑CoA transferase |
| ? | NC_000913 | = 2493124 | 28 (1.070) | coding (131/1251 nt) | frc | formyl‑CoA transferase | |||||
ATCAGCTTCGCGGATCAGCTTTTCCATTACCTCTTTGCCTTCCGCTGTTTTGGTATTTAACTCAATAGAACGTTTGTTACTGTTAAGCATGGTGAAGTAAAGCGCATCGATATCAGGAATATCTCGCAGCTGGTGACGCGTTACGTCACCAACGCCGGGACGTTCAATTTTAATAACGTCAGCGCCAAACCAGGCCAGCATTTGAGTACAAGATGGGCCAGATTGCACACCGGTGAAATCGAGAACTTTAATTCCTTGAAGTGGAGTTGACATAGCA > NC_000913/2492982‑2493258 | atCAGCTTCGCGGATCAGCTTTTCCATTACCTCTTTGCCTTCCGCTGTTTTGGTATTTAACTCAATAGAACGTTTGTTACTGTTAAGCATGGTGAAGTAAAGCGCATCGATATCAGGAATATCTCGCAGCTGGTGACGCGTTa < 1:145124/143‑1 (MQ=255) tCAGCTTCGCGGATCAGCTTTTCCATTACCTCTTTGCCTTACGCAGTTTTGGTATTTAAGTCAATAGAACGTTTGTTACTGGGAAGCATGGTGAAGTTGAGAGCACCGATATCAGGAATATCTCGCAGCTGGTGACGCGTTAc < 1:487923‑M2/143‑2 (MQ=255) aGCTTCGCGGATCAGCTTTTCCATTACCTCTTTGCCTTCCGCTGTTTTGGTATTTAACTCAATAGAACGTTTGTTACTGTTAAGCATGGTGAAGTAAAGCGCATCGATATCAGGAATATCTCGCAGCTGGTGACGCGTTAcgt > 1:298163‑M2/1‑140 (MQ=255) cTTCGCGGATCAGCTTTTCCATTACCTCTTTGCCTTCCGCTGTTTTGGTATTTAACTCAATAGAACGTTTGTTACTGTTAAGCATGGTGAAGTAAAGCGCATCGATATCAGGAATATCTCGCAGCTGGTGACGCGTTAcgtca < 2:137967‑M2/143‑6 (MQ=255) ttCGCGGATCAGCTTTTCCATTACCTCTTTGCCTTCCGCTGTTTTGGTATTTAACTCAATAGAACGTTTGTTACTGTTAAGCATGGTGAAGTAAAGCGCATCGATATCAGGAAGATCTCGCAGCTGGGGACGCGTTAcggcac < 1:365927‑M2/143‑7 (MQ=255) ttCGCGGATCAGCTTTTCCATTACCTCTTTGACATCCGCTGTTTTGGTATTTAACTCAATAGAACGTTTGTTACTGTTAAGCATGGTGAAGTAAAGCGCATCGATATCAGGAATATCTCGCAGCTGGTGACGCGTTAcgtcac > 1:146446‑M2/1‑137 (MQ=255) tCGCGGATCAGCTTTTCCATTACCTCTTTGCCTTCCGCTGTTTTGGTATTTAACTCAATAGAACGTTTGTTACTGTTAAGCATGGTGAAGTAAAGCGCATCGATATCAGGAATATCTCGCAGCTGGTGACGCGTTAcgtcacc > 1:197874‑M2/1‑136 (MQ=255) ttttCCATTACCTCTTTGCCTTCCGCTGTTTTGGTATTTAACTCAATAGAACGTTTGTTACTGTTAAGCATGGTGAAGTAAAGCGCATCGATATCAGGAATATCTCGCAGCTGGTGACGCGTGGCGTCAGCAACGGCGGGagg > 1:265056/1‑141 (MQ=255) aTTACGTCTTTGCGTTCCGCTGTTTTGGTAGTTACCTCATTAGAACGTTTGTTACTGTTAAGCATGGTGAAGGAAAGCGCATCGATCTCAGGAATATCTCTCAGCTGGTGACGCGTTACGTCACCAACGCCGGGACGTTCAAt < 2:325918/143‑1 (MQ=255) tACTTCGTTGCCTTCCGCTGTTTTGGTATTTAATTCAATAGAACGTTTGTTACTGTTAAGCATGGTGAAGTAAAGCGCATCGATATCAGGAATATCTCGCAGCTCGTGACGCGTTACGTCACCAACGCCGGGACGTTCAAttt < 2:442705/143‑1 (MQ=255) tACCTCTTTGCCTTCCGCTGTTTTGGTATTTAACTCAATAGAACGTTTGTTACTGTTAAGCATGGTGAAGTAAAGCGCATCGATATCAGGAATATCTCGCAGCTGGTGACGCATTACGTCACCAACGCGGGCACGATCAActt > 2:311667/1‑143 (MQ=255) cccctTTGGCTCCCGCTGTTTTGGTATGTAACTCAATAGAACGTTTGTTACTGTTAAGCATGGTGAAGTAAAGCGCATCGATATCAGGAATATCTCGCAGCTGGTGACGCGTTACGTCACCAACGCCGGGACGTTCAATTTta < 2:345433/140‑1 (MQ=255) ccTTCCGCTGTTTTGGTATTTAACTCAATAGAACGTTTGTTACTGTTAAGCATGGTGAAGTAAAGCGCATCGATATCAGGAATATCTCGCAGCTGGTGACGCGGTACGTCAGCAACGCCGGGGCGTTCAATTTGCACAACGTc > 1:171009/1‑143 (MQ=255) tgcGCTGTTTTCGTATTTAATTCATTAGAACGTTTGTTACTTTTAAGCATGGTGAAGTAAAGCGCATCGTTATCAGGAATATCTCGCAGCTGGTGACGCGTTACGTCACCAACGCCGGGACGTTCAATTTTAATAACGTCAgc < 2:308187/141‑1 (MQ=255) ccGCTGTTTTGGTATTTAACTCAATAGAACGTTTGTTACTGTTAAGCATGGTGAAGTAAAGCGCATCGATATCAGGAATATCTCGCAGCTGGTGACGCGTTACGTCACCAACGCCGGGACGTGCAATTTTAATAACGTGAgcg > 1:108102/1‑143 (MQ=255) ttttGGTATTTAACTCAATAGAACGTTTGTTACTGTTAAGCATGGTGAAGTAAAGCGCATCGATATCAGGAATATCTCGCAGCTGGTGACGCGTTACGTCACCAACGCCGGGACGTTCAATTTTAATAACGTCAGCGCCAAAc > 1:319088/1‑143 (MQ=255) tATTTAACTCAATAGAACGTTTGTTACTGTTAAGCATGGTGAAGTAAAGCGCATCGATATCAGGAATATCTCGCAGCTGGTGACGCGTTACGTCACCAACGCCGGGACGTTCACTTTTAATAACGTCACCGCCAAACCAGAcc > 2:282534/1‑143 (MQ=255) agctcggtAGCACGTTTGTTACTGTGGAGCATGGTGAAGTAAAGCGCATCGATATCAGGAATATCTCGCAGCTGGTGACGCGTTACGTCACCAACGGCGGGACGTTCAATTTTAATAACGTCAGCGCCAAACCAGGCCAGCAt < 2:193195/136‑1 (MQ=255) cTCAATAGAACGTTTGTTACTGTTAAGCATGGTGAAGTAAAGCGCATCGATATCAGGAATATCTCGCAGCTGGTGACGCGTTACGTCACCAACGCCGGGACGTTCAATTTTAATAACGTCAGCGCCAAACCAGGCCAGCAtct > 1:409462/1‑141 (MQ=255) ttGTTACTGTTAAGCATGGTGAAGTAAAGCGCATCGATATCAGGAATATCTCGCAGCTGGTGACGCGTTACGTCACCAACGCCGGGACGTTCAATTTTAATAACGTCAGCGCCAAACCAGGCCAGCATTTGAGTACAAGATgg < 1:236787/143‑1 (MQ=255) tACTGTTAAGCATGGTGAAGTAAAGCGCATCGATATCAGGAATATCTCGCAGCTGGTGACGCGTTACGTCACCAACGCCGGGACGTTCAATTTTAATAACGTCAGCGCCAAACCAGGCCAGCATTTGAGGACAAGATGGGCCa > 1:261910/1‑143 (MQ=255) tGAAGTAAAGCGCATCGATATCAGGAATATCTCGCAGCTGGTGACGCGTTACGTCACCAACGCCGGGACGTTCAATTTTAATAACGTCAGCGCCAAACCAGGCCAGCATTTGAGGACAAGATGGGCCAGATTGCACACCGGTg > 1:544805/1‑143 (MQ=255) aaGTAAAGCGCATCGATATCAGGAATATCTCGCAGCTGGTGACGCGTTACGTCACCAACGCCGGGACGTTCAATTTTAATCACGTCAGCGCCAAACCAGGCCAGCATTCGAGTACAAGATGGGCCAGATTGCACACCGGTGaa > 1:275935/1‑143 (MQ=255) gcgcgcATCGCTCTCTGTTATATCTCGCAGCTGTTGGCGCTTTCTTTCACCGTCGCCGGTTCTTTCAATTGTAGTTTCTTCAGCGCCAAACCAGGCCAGCACTTGACTACAAGATGGGCCAGATTTCACACCGGTGAAATCga < 2:414032/141‑1 (MQ=255) cgcATCGATATCGGGAAGAGCCCGCAGCTGGTGACGCGTTACGTCACCAACGCCGGGACGTTCAATTTTAATAACGTCAGCGCCAAACCAGGCCAGCATTTGTGTACAAGATGGGCCAGATTGCACACCGGTGAAATCGAGaa < 2:59709/143‑1 (MQ=255) cgcATCGATATCAGGAATATCTCGCAGCTGGTGACGCGTTACGTCACCAACGCCGGGACGTTCAATTTTAATAACGTCAGCGCCAAACCAGCCCAGCATTTGAGTACAAGATGGGCCAGCCTGCACACCGGTGCAATCGAGaa > 2:206539/1‑143 (MQ=255) gcATCGATATCAGGAATATCTCGCAGCTGGTGACGCGTTACGTCACCAACGCCGGGACGTTCAATTTTAATAACGTCAGCGCCAAACCAGGCCAGCATTTGAGTACAAGATGGGCCAGAGTGCACACCGGTGAAATCGAGAAc > 1:73753/1‑143 (MQ=255) atatCAGGAATATCTCGCAGCTGGTGACGCGTTAcgtcaccagctgcgagatattcctgatatcgatgcgctttacttcaccatgcttaacagtaacaaacgttctattgagttaaataccaaaacagcggaaggccaagagg < 2:451268‑M2/143‑110 (MQ=255) tatCAGGAATATCTCGCAGCTGGTGACGCGTTAcgtcaccagctgcgagatattcctgatatcgatgcgctttacttcaccatgcttaacagtaacaaacgttctattaagtaaaatactaaagtagagcaaggcaaagaggt < 2:324240‑M2/143‑111 (MQ=255) gAATATCTCGCAGCTGGTGACGCGTAACGTCACCAACGCCGGGACGTTCAATTTTAATAACGTCAGCGCCAAACCAGGCCAGCATTTGAGTACAAGATGGGCCAGATTGCACACCGGTGAAATCGAGAACTTTAATTCCTTGa < 1:88889/143‑1 (MQ=255) aaTATCTCGCAGCTGGTGACGCGTTACGTCACCAACGCCGGGACGTTCAATTTTAATAACGTCAGCGCCAAACCAGGCCAGCATTTGAGTACAAGCTGGGCCAGATTGCACACGGGAGAAATCGAGAACTTTAATTCCTTGaa > 2:187714/1‑143 (MQ=255) tcGCAGCTGGTGACGCGTTACGTCACCAACGCCGGGACGTTCAATTTTAATAACGTCAGCGCCAAACCAGGCCAGCATTTGAGTACAAGATGGGCCAGATTGCACACCGGTGAAATCGAGAACTTTAATTCCTTGAAGTGGAg < 2:487923/143‑1 (MQ=255) cgCTGGTGACGCGGTACGTCACCAACGCCGGGACGTTCAATTTTAATAACGTCAGCGCCAAACCAGGCCAGCATTTGAGTACAAGATGGGCCAGATTGCACACCGGTGAAATCGAGAACTTTAATTCCTTGAAGTGGAGTTGa < 2:178344/142‑1 (MQ=255) aGCTGGTGACGCGTTAcgtcaccaactgcgagatattcctgatatcgatgcgctttacttcaccatgcttaacagtaacaaacgttccattgagttaaataccaaaacagcggaaggcaaagaggtcatggaaacgctgatcc < 2:160438‑M2/143‑128 (MQ=255) aGCTGGTGACGCGTTACGTCACCAACGCCGGGACGTTCAATTTTAATAACGTCAGCGCCAAACCAGGCCAGCATTTGAGTACAAGATGGGCCAGATTGCACACCGGTGAAATCGAGAACTTTAATTCCTTGAAGTGGAGTTGa < 1:360771/143‑1 (MQ=255) aGCTGGTGACGCGTTACGTCACCAACGCCGGGACGTTCAATTTTAATAACGTCAGCGCCAAACCAGGCCAGCATTTGAGTACAAGATGGGCCAGATTGCACACCGGTGAAATCGAGAACTTTAATTCCTTGAAGTGGAGTTGa < 1:139620/143‑1 (MQ=255) aGCTGGGGACGCGTTACGTCACCAACGCCGGGACGTTCAATTTTAATAACGTCAGCGCCAAACCAGGCCAGCATTTGAGTACAAGATGGGCCAGATTGCACACCGGTGAAATCGAGAACTTTAATTCCTTGAAGTGGAGTTGa < 1:286261/143‑1 (MQ=255) tGGTGACGCGTTAcgtcaccagctgcgagatattcctgatatcgatgcgctttacttcaccatgcttcacagtaacaaacgttctattgagttaaataccaaaccagcggaaggcaaagaggtaatggaaaagctgatccgcg < 2:543051‑M2/143‑131 (MQ=255) gACGCGTTACGTCACCAACGCCGGGACGTTCAATTTTAATAACGTCAGCGCCAAACCAGGCCAGCATTTGAGTACAAGATGGGCCAGATTGCACACCGGTGAAATCGAGAACTTTAATTCCTTGAAGTGGAGTTGACATAGCa < 1:207660/143‑1 (MQ=255) | ATCAGCTTCGCGGATCAGCTTTTCCATTACCTCTTTGCCTTCCGCTGTTTTGGTATTTAACTCAATAGAACGTTTGTTACTGTTAAGCATGGTGAAGTAAAGCGCATCGATATCAGGAATATCTCGCAGCTGGTGACGCGTTACGTCACCAACGCCGGGACGTTCAATTTTAATAACGTCAGCGCCAAACCAGGCCAGCATTTGAGTACAAGATGGGCCAGATTGCACACCGGTGAAATCGAGAACTTTAATTCCTTGAAGTGGAGTTGACATAGCA > NC_000913/2492982‑2493258 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |