New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 315852NA (NA)14 (0.320) 11/274 2.9 NA noncoding (624/1255 nt) IS3 repeat region
?NC_000913 = 315875 NA (NA)noncoding (647/1255 nt) IS3 repeat region

Only 100 of 124 total aligned reads displayed.

ACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGTGGCGGCAAGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/315707‑315852
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGTC  <  NC_000913/315875‑315734
                                                                                                                                                                                                                                                                                                 
attCGTCAGCAGTTCCGCCAGCACTGCGACAGCGTTGTCCGCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGTGGCGGCAAG                                                                                                                                                    <  1:226070/140‑1
ACGCGTCATTAGTTCCATCTACACTGCGACAGCGTTGTCCTCGGGTCTTTTACCCGTTCAAAACAGCGTTACGTTGCCCCACTCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGTGGCGGCAAG                                                                                                                                                    <  1:112555/143‑1
ACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGAGTAAACAATTTAACGTAAAAAACGTGGCGGCAAG                                                                                                                                                    >  1:299877/1‑143
ACGCGGCAGCAGTTCCGCCAACACTGCGACAGCGTTGGGCTCGCGGCTTCTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGTGGCGGCAAG                                                                                                                                                    <  1:844309/143‑1
 CGCGTCAGCAGTTCCGCTAACACTGCGACAGCGTTGTCCTCGCTGCTTTTACTCTGTCATAACATCGTTTCGGTGCCCCACACCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGTGGCGGCAAGC                                                                                                                                                   <  1:117984/143‑1
 CGCGTCAGCAGTTCCGCCAACGCTTCGACAGCTTTGTTCTCGCGGCTTTTACCCGTTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGTGGCGGCAAGC                                                                                                                                                   <  1:275912/143‑1
 CGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAACACCGTGGCGGCAAGC                                                                                                                                                   >  1:585234/1‑143
 CGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCGTGTACCCGGTCAAAGCAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGTGGCGGCAAGC                                                                                                                                                   <  1:114271/143‑1
 CGCGGCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGTGGCGGCAAGC                                                                                                                                                   <  1:610224/143‑1
  GCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAACACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGTGGCCGCAAGCC                                                                                                                                                  >  1:642699/1‑143
  GCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAATCAGTGTTACGGTGCCCAACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGTGGCGGCAAGCC                                                                                                                                                  <  1:205546/143‑1
  GCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCGCGCCTGACGGATGAACTGCGTGCTCAAGGTTACCCCTTTAACGTAAAAACCGTGGCGGCAAGCC                                                                                                                                                  >  2:684586/1‑143
  GCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGTGGCGGCAAGCC                                                                                                                                                  <  1:479438/143‑1
  GCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGTGGCGGCAAGCC                                                                                                                                                  <  2:389755/143‑1
  GCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTATAACGTAAAAACCGTGGCGGCAAGCC                                                                                                                                                  >  1:345531/1‑143
  GCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACACCTTTAACGTAAAAACCGAAGCGGCAAGCC                                                                                                                                                  >  1:86179/1‑143
  GCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCCCAGGGTTACCCCTTTACCGTAAAAACCGTGGCGGCAAGCC                                                                                                                                                  >  2:116691/1‑143
  GCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAACGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTGCCCCTTTACCGTATACACCGTGGCGCCAAGCC                                                                                                                                                  >  1:260727/1‑143
  GCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGCCAAAACCGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCAATAACGTAAAAACCGTAGCGGCAAGCC                                                                                                                                                  >  1:294722/1‑143
   ctttagtAGTTCTGCCAACATTGTGATAACGTTGTCCTCGCGGCTTTTACCCGGTCAACACAGCGTTACGGTGCCTCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGTGGCGGCAAGCCT                                                                                                                                                 <  1:206013/136‑1
   CGTTAGCATTTCCACCAACATTGCTACAGCGTTGTCCGCGCGGCTCTGACCCGGTCAAAACGGCGTTACGGGGCCCCACGCCTGACGGATGAACTGCGTGCTGAGGGTTACCCCTTTAACGTAAAAACCGTGGCGGCAAGCCT                                                                                                                                                 <  1:177948/143‑1
   CGTGAGCATTTCCGGCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGTGGCGGCAAGCCT                                                                                                                                                 <  2:722407/143‑1
   CGTCCGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGTGGCGGCAAGCCT                                                                                                                                                 <  2:623704/143‑1
   CGTCAGCAGTTCCGCCAACACTGCGATAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGTGGCGGCAAGCCT                                                                                                                                                 >  1:677233/1‑143
   CGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTGTTACCCGGTCAAAACAGCGTTACGGGGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGTGGCGGCAAGCCT                                                                                                                                                 <  1:758918/143‑1
    GTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTCCCCCACGCCTGACGGATGAACTGCGGGATCAGGGTTACCCCTTTAACGTAAAAACCGTGGCGGCAAGCCcg                                                                                                                                                >  2:836406/1‑141
       AGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGCGGCGGCAAGCCTccgc                                                                                                                                             >  1:420933/1‑139
        GCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAACCAGCGTTACGGTGCCCCACGCCTGACGTATGAACTGCCTGCTCAGGCTTACCCCTTTACCCTAAACACCGTGGCCGCAAGCCTacgac                                                                                                                                            >  1:787864/1‑138
        GCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAAGGATAACCAATTAACGTAAAAACAGTGGAGGCAAGCatacggc                                                                                                                                            >  1:752238/1‑136
        GCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGCTGCCCCACGCCTGCCGGATGCACTGCGTGCTAAGGGTTACTCCGTTTATGTAAAAACAGAAGCCGCAAGCCTTCGCC                                                                                                                                            >  1:112831/1‑143
                       cgGCGAGAGCGTTGTCCTCGCTGCTTTTTCCTGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGCACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGTGGCGGCATGCCTGCGCCCTCAGTCCCTGACGG                                                                                                                             <  2:670103/141‑1
                          ctACATCGTTGTCCTCTCTGCTTTTACCCGGTCAAAACAGCGTGACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGTGGCGGCAAGCCTGCGCCCTCAGTCCCTGACGGCGC                                                                                                                          <  1:196530/141‑1
                           GACAGCGTTGTTCTCGCGGCGTTTACCCGGTCAAAACGTCGTTACGTTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGTGGCGGCAAGCCTTTGCCCTCAGTCCCTGACGGCGCA                                                                                                                         <  2:233118/143‑1
                            ACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGTGGCGGCAAGCCTTTGCCCTCAGTCCCTGACGGCGCAG                                                                                                                        <  1:664097/143‑1
                             CAGCGTGGTCCTCGCGGCTTGTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGTGGCGGCAAGCCTTTGCCCTCAGTCCCTGACGGCGCAGG                                                                                                                       <  1:682559/143‑1
                              AGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCACGGTTACCCCTTTAACGTAAAAACCGTGGCGGCAAGCCTTTGCCCTCAGTCCCTGACGGCGCAGGC                                                                                                                      <  2:740602/143‑1
                              AGCGTTGTCCTCGCGGCTTTTACCCAGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGTGGCGGCAAGCCTTTGCCCTCAGTCCCTGACGGCGCAGGC                                                                                                                      <  1:264434/143‑1
                                CGTTGTCCGCGCGTCTTGGACCCGGGCAAGACAGCGTTTCGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGTGTTACCCCTTTAACGTAAAAACCGTGGCGGCAAGCCTTTGCCCTCAGTCCCTGACGGCGCAGGCTT                                                                                                                    <  1:783049/143‑1
                                 GTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGTGGCGGCAAG                                                                                                                                                    >  1:365532/1‑110
                                  TTGTCCGCGCGGCTTTTAGCCGGTCAAAACAGCGGTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGTGGCGGCAAGCCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGC                                                                                                                  <  1:824832/143‑1
                                        gCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGTGGCGGGAGGCCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCAC                                                                                                            <  2:462993/142‑1
                                         CGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGTGGCGGCAAGCCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACG                                                                                                           <  1:679843/143‑1
                                                                                                                                     ttcCGGCATGCCGTTGCCGTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAG              <  2:127343/140‑1
                                                                                                                                            atGCCTTTGCCCTCATTCCCTGACGGCGTAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTGCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACG       <  1:819132/141‑1
                                                                                                                                            agtCCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCTCGAGGACAACG       <  2:340158/140‑1
                                                                                                                                              gaCTTTTCGCTTAGTCCCTGACGGCGCAGGCTTGCCGCCTCTTTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCT     <  2:497034/141‑1
                                                                                                                                              GCCTTTGCGCTCAGTCCATGACGGCGCAGGCGTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCT     <  2:399197/143‑1
                                                                                                                                              GCCTTTGCCCTTAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCTTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCT     <  2:54186/143‑1
                                                                                                                                              GCCTTTGCCCTCAGTGCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTAAAAGGGGTAAACCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGAGAGGGGAAAAGCCGCGAGGACAACGgt     >  2:62709/1‑141
                                                                                                                                              GCCTTTGCCCTCAGTCCCTGATGGCGCAGGCTTGCCGCCACGGTTTTTAAGTTAAAGGGGGAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCT     <  1:564666/143‑1
                                                                                                                                              GCCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCCTCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGCCCGGGTGAACGCCGCGAGGACAACGCT     >  1:554312/1‑143
                                                                                                                                              GCCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAACAGCCGCGAGGACAACGCT     >  1:411285/1‑143
                                                                                                                                              GCCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCT     >  2:524176/1‑143
                                                                                                                                              GCCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCT     >  2:703860/1‑143
                                                                                                                                              GCCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCT     <  2:531620/143‑1
                                                                                                                                              GCCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATAAGTAAGGACAATATCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCT     >  1:845392/1‑143
                                                                                                                                              GCCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCACCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCT     >  1:545697/1‑143
                                                                                                                                               tCTTTGCCCTCAGGGCCGGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTG    <  1:833885/142‑1
                                                                                                                                               CCTTTGCCCTCAGTGCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTCCGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCGCCGTAGCGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTG    <  2:790648/143‑1
                                                                                                                                               CCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTCGGGCACCGCAACGCTGCTTTGACCGGGTAAAAGCCGCGAGGACAACGCTG    >  2:369940/1‑143
                                                                                                                                                CTTTGCCGTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGGAACCCTGAGCACGCAGTTCAGCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGT   <  2:521575/143‑1
                                                                                                                                                CTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGTTTTTTACGTTAAAGGAGAAACCCTTAGCACGCAGTGCATCCTTCATGCGTGGTGCACCGGAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGT   <  1:411727/143‑1
                                                                                                                                                CTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGTACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGT   <  1:728246/143‑1
                                                                                                                                                CTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCCCGCAGTTCACCCGTTGGGCGTGGGGACCCGTAACGTGTTTTGGCCCGGGTAAAAGCGGCGAGGACAACGCTtt   >  2:816358/1‑141
                                                                                                                                                CTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCCTCCGTCAGGCGTGAGGCCACGACCACCGGCTGTGACCGGGTAAAAGCCGCGAGGACACCGCTGT   >  2:172927/1‑143
                                                                                                                                                CTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTGAGGCGTGCGGCACCGTAACGCTGTTTTTATCGGGTAAAAGCCGCGATGCCCACGCTGT   >  2:551469/1‑143
                                                                                                                                                CTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCGACGTAGGGACACGCACACCGGCTAAAAGCCGCGAGGACGACGCTGT   >  2:368207/1‑143
                                                                                                                                                CTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTCACGCTGATGCGACCGGGTAAAAGCCGCGAGGCCAACGCTGT   >  1:152363/1‑143
                                                                                                                                                CTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTCACGCCGTTTCGCCCGGGCCGAAGCCGCGAGGACACCGCggg   >  1:139843/1‑140
                                                                                                                                                CTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGT   >  1:490811/1‑143
                                                                                                                                                CTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGT   >  2:164809/1‑143
                                                                                                                                                CTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGT   >  1:723603/1‑143
                                                                                                                                                CTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGT   >  1:360450/1‑143
                                                                                                                                                CTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGT   >  1:83122/1‑143
                                                                                                                                                CTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACAGGGGAAACGCGGCGAGGACAACGCTGT   >  2:327258/1‑143
                                                                                                                                                CTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGGAACGCTGTTTTGACCGGGTGAAAGCCGCGAGGACCACGCTGT   >  2:701589/1‑143
                                                                                                                                                CTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTAAGGCTTGGGTCACCGTAACGCTGTTTTGACCGGGTAAAAGCAGATAGGACAACGCTGT   >  1:62723/1‑143
                                                                                                                                                CTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGCCAGGCGTGGGGCACCGTAACGCTGTTTTGCCCGGGTAAAAGCCGCGAGGACAACGCTGT   >  1:566244/1‑143
                                                                                                                                                CTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCATCAGGCGTGGGGCACCGTAACGCTGTTTTGCCCGGGTAAAAGCCGCGAGGACAACGCTGT   >  2:474103/1‑143
                                                                                                                                                CTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATACGCCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTCAAAGCCGCGCGGACAACGATGT   >  2:110196/1‑143
                                                                                                                                                CTTTGCCCTCAGTCACTGACGGCTCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGGAGACAACGATGT   >  2:746151/1‑143
                                                                                                                                                CTTTACACTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCCCCGTAACGCTGTGTTGACCGGGTAAAAGCCGCGAGGACAACGCTGT   >  2:562659/1‑143
                                                                                                                                                 TTTGGCCTCAGGCCCTGGCGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTTATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGTC  <  2:730809/143‑1
                                                                                                                                                 TTTGCGCTCAGTCGCTGTTGGTGCGGGGTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCGTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGTC  <  2:729812/143‑1
                                                                                                                                                 TTTGCCCTCTGTCCCTGATGGCTCAGTTTTTCCTCTTCTGTTTTTTCGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGTC  <  1:10927/143‑1
                                                                                                                                                 TTTGCCCTCCGTCCCTGACGGCGCAGGTTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCCCGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGTC  <  2:214056/143‑1
                                                                                                                                                 TTTGCCCTCAGTCCCTGACGGTGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGACGACAACGCTGTC  >  2:831580/1‑143
                                                                                                                                                 TTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCTGGTAAAAGCCGCGAGGACAACGCTGTC  >  1:172585/1‑143
                                                                                                                                                 TTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAGGCCGCGAGGACAACGCTGTC  <  1:808822/143‑1
                                                                                                                                                 TTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGCGGACAACGCTGTC  >  2:803041/1‑143
                                                                                                                                                 TTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACACCGCTGTC  >  2:9261/1‑143
                                                                                                                                                 TTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGTC  >  1:593267/1‑143
                                                                                                                                                 TTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGTC  >  1:637778/1‑143
                                                                                                                                                 TTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAAAGCTGTTTTGACCGGGTAAAAGCAGAGAGGAAAACGCAGTC  >  2:35024/1‑143
                                                                                                                                                 TTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAAGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGTC  >  1:498142/1‑143
                                                                                                                                                 TTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCA                                                                    <  2:593481/78‑1
                                                                                                                                                 TTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCA                                                                    >  1:593481/1‑78
                                                                                                                                                 TTTGCCCTCAGTCCCTGACGGCGCACGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTACCCCTCAGCCCGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGCGTCACCTCCGCGACGACACCGCTGcc  >  2:784749/1‑141
                                                                                                                                                 TTTGCCCTCAGTCACTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACACTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTCACGCTGTTTTGAACGGGTAAAAGCCGCGAGGACAACGCagcc  >  2:329376/1‑139
                                                                                                                                                 TTTGCCCGCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGTC  <  2:496872/143‑1
                                                                                                                                                                                                                                                                                                 
ACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGTGGCGGCAAGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/315707‑315852
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGTC  <  NC_000913/315875‑315734

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.