New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1436096 =81 (1.490)282 (5.230) 161/280 0.0 82.2% coding (798/1134 nt) ompN outer membrane porin N
?NC_000913 = 1441187 42 (0.780)coding (130/267 nt) ydbJ DUF333 domain‑containing protein YdbJ

Only 100 of 285 total aligned reads displayed.

CCTCTTCTGACCGCACCAATGACCAGGTTAACCATACTGCGGCGGGTGGTGATAAAGCAGACGCGTGGACTGCTGGGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1436238‑1436096
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCAGTCGCCTGCTGAACAGGTTCACTACTACACGCCGACAACAATAAAGCGGCACACCCTACCCAAAACGCTGCTCGCATCTTTTCTTCCTC  <  NC_000913/1441187‑1441046
                                                                                                                                                                                                                                                                                             
 CTCTTCTGACCGCACCAATGACCAGGTTAACCATACTGCGGCGGGTGGTGATAAAGCAGACGCGTGGACTGCTGGGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGC                                                                                                                                               >  1:589809/1‑143
    TTCTGACCGCACCAATGACCAGGTTAACCATACTGCGGCGGGTGGTGATAAAGCAGACGCGTGGACTGCTGGGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTC                                                                                                                                            >  1:359671/1‑143
      CTGACCGCACCAATGACCAGGTTAACCATACTGCGGCGGGTGGTGATAAAGCAGACGCGTGGACTGCTGGGCTAAAATACGATGGTAACAATATTTACCTGGCAACCATGTATTCAGGGACGCGTAATATGACCCCGCTTCTC                                                                                                                                          >  1:906883/1‑143
        GACCGCACCAATGACCAGGTTAACCATACTGCGGCGGGTGGTGATAAAGCAGACGCGTGGACTGCTGGGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCA                                                                                                                                        <  1:194987/143‑1
         ACCGCACCAATGACCAGGTTAACCATACTGCGGCGGGAGGCGATAAAACAGACGCGTGCACCGCTGGGCTAAAATACGAGGCTGACAACATTTACCTGACAACCATGTATTCAGAGACGCATAATATGACCCCGCAGCTCCAC                                                                                                                                       >  2:350548/1‑143
         ACCGCACCAATCCCCAGGTTAACAATACTGCTGCGGGTGGTGATAAAGCAGACGCGTTGACTGCTTGGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCAC                                                                                                                                       <  2:1000151/143‑1
           CGCACCAATGACCAGGTTAACCATACTGCGGCGGGTGGTGATAAAGCAGACGCGTGGACTGCTGGGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGAACCCCCTTCTCAACTA                                                                                                                                     >  2:454731/1‑143
           CGCACCAATGACCAGGTTAACCATACTGCGGCGGGTGGTGATAAAGCAGACGCGTGGACTGCTGGGATAAAATACGATGCTAACAATATTTACCTGGCAACCCTGTATTCAGAAACGCGTCAGATGACCCCGCTTCTCCACTA                                                                                                                                     >  1:656439/1‑143
             CACCAATGACCAGGTGAAGCATACTGCGGCGGGTGGTCATAAAGCAGACGCGTGGACTGCTGGGCTAAAAGACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACT                                                                                                                                   <  2:624079/143‑1
                  ATGACCAGGTTAACCATACTGCGGCGGGTGGTGATAAAGCAGACGCGTGGACTGCTGGGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAACCGGGTAATATGACCCCGCTCCTCCCCTACCGGACA                                                                                                                              >  2:651533/1‑143
                  ATGACCAGGTTAACCATACTGCGGCGGGTGGTGATAAAGCAGACGCGTGGACTGCTGGGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACA                                                                                                                              >  1:160400/1‑143
                   TGACCAGGTTAACCATACTGCGGCGGGTGGTGATAAAGCAGACGCGTGGACTGCTGGGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACAT                                                                                                                             >  1:700467/1‑143
                     ACCAGGTTAACCATACTGCGGCGGGTGGTGATAAAGCAGACGCGTGGACTGCTGGGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGAATTCAGATACGCTTAATATGACCCCGCTTCTCCACTACTGGACATCG                                                                                                                           <  1:685112/143‑1
                      CCAGGTTAACCATACTGCGGCGGGTGGTGATAAAGCAGACGCGTGGACTGCTGGGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTACTATGACCCCGCGTCTCCCCTACTGCACATCGA                                                                                                                          >  2:738992/1‑143
                       CAGGTTAACCATACTGCGGCGGGTGGTGATAAAGCAGACGCGTGGACTGCTGGGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGAC                                                                                                                         >  1:821287/1‑143
                       CAGGTTAACCATACTGCGGCGGGTGGTGATAAAGCAGACGCGTGGACTGCTGGGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGAC                                                                                                                         >  2:793042/1‑143
                       CAGGTTAACCATACTGCGGCGGGTGGTGATAAAGCAGACGCGTGGACTGCTGGGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGAGTAATATGACCCCGCTTCTCCACTACTGGACAaagac                                                                                                                         >  2:312692/1‑138
                        AGGTGAGCCATACTGCGGCGTGTGGTGATCCAGCCTGCTTTTGTACTGCTGGGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACG                                                                                                                        <  2:966908/143‑1
                          GTTAACCATACTGCGGCGGGTGGTGATAAAGCAGACGCGTGGACTGCTGGGCTGAAATACGAAGCTAACAATATTTACCTGGCAACCATGTATTCAGACACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCT                                                                                                                      >  2:571636/1‑143
                          GTTAACCATACTGCGGCGGGTGGTGATAAAGCAGACACGTGGACTGCTGGGCGAAAATACGATGCTAACAACATTTACCTGGCAACCATGTATGCAGAGACGCGTAATATGAACCCGCCGCACCACTACTACACATCGACacg                                                                                                                      >  2:82543/1‑140
                           gtgACCATACTGCGGCGGGTGGTGATAAAGCAGACGCGTGGACTGCTGGGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTACTCAGAAACGCGTCATATGGCCCCGCTTCTCCACTACTGGACATCGACGCTT                                                                                                                     <  2:523611/140‑1
                           TTAACCATACTGCGGCGGGTGGTGATAAAGCAGACGCGTGGACTGCTGGGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTT                                                                                                                     <  1:814707/143‑1
                             cgtccTACTGGGGCGGGTGGTGCTAAGGCAGACGGGTTGACCGCTGTGACACGATGCGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTT                                                                                                                   <  2:918486/138‑1
                               ccgttCTGCGGCGGTCGGTGCTAAAGCAGACGCGTGGACTGCTGGGCTAAACGACGATGCTAACAATATTTACCTGGCCACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAA                                                                                                                 <  2:538595/138‑1
                               CCATACTGCGGCGGGTGGTGATAAAGCAGACGCGTGGACTGCTGGGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATGTACGCTTTTAA                                                                                                                 >  1:833872/1‑143
                                CATACTGCGGCGGGTGGTGATAAAGCAGACGCGTGGACTGCTGGGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAA                                                                                                                >  1:91811/1‑143
                                    CTGCGGCGGGTGGTGATAAAGCAGACGCGTGGACTGCTGGGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTG                                                                                                            >  2:257149/1‑143
                                    CTGCGGCGGGTGGTGATAAAGCAGACGCGTGGACTGCTGGGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTG                                                                                                            <  1:567726/143‑1
                                      gctGCGTGTTGTGATCATGCAGATGCGTGGACTGCTGGGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATGCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAATCATGGC                                                                                                          <  2:666967/140‑1
                                       CGGCGGGTGGTGATAAAGCAGACGCGTGGACTGCTGGGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCG                                                                                                         >  1:970711/1‑143
                                       CGGCGGGTGGTGATAAAGCAGACGCGTGGACTGCTGGGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCG                                                                                                         >  1:726030/1‑143
                                          CGGGTGGTGATAAAGCAGACGCGTGGACTGCTGGGCTAAAATGCGATGCTAACAATATTTACCTGGCAACCCTGTATTCAGAAACGCTGAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTCGCGCTA                                                                                                      >  2:599734/1‑143
                                              TGGTGATAAAGCAGACGCGTGGACTGCTGGGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTG                                                                                                  >  1:510043/1‑143
                                                 TGATAAAGCAGACGCTTGGACTGCTGGGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTTCTGGACATCGACGCGTTTAAACCTGGCGCTACGTGCGC                                                                                               <  2:989398/143‑1
                                                  GATAAAGCAGACGCGTGGACTGCTGGGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCG                                                                                              >  2:548966/1‑143
                                                   ATAAAGCAGACGCGTGGACTGCTGGGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGG                                                                                             <  2:502233/143‑1
                                                   ATAAAGCAGACGCGTGGACTGCTGGGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGG                                                                                             >  1:736162/1‑143
                                                    TAAAGCAGACGCGTGGACTGCTGGGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTCCGTGCGCGGC                                                                                            >  1:303561/1‑143
                                                      AAGCAGACGCGTGGACTGCTGGGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTAAGCAGCACGAAAGAGGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTCAACCGGGCCCTACGTGCGCGGCAG                                                                                          >  2:810020/1‑143
                                                        GCAGACGCGTGGACTGCTGGGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCAGTC                                                                                        <  1:902802/143‑1
                                                         CAGACGCGTGGACTGCTGGGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCAGTCG                                                                                       >  1:883435/1‑143
                                                             CGCGTGGACTGCTGGGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCAGTCGCCTG                                                                                   <  1:893134/143‑1
                                                              GCGTGGACTGCTGGGCTAAAATACGATGCTAACAATATTTACCTGACAACCATGTATTCAGAAACGGGTAAGATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTACACCTGGCGCTACGTGCGCGGCAGTCGCCTGC                                                                                  >  1:281470/1‑143
                                                                GTGGACTGCTGGGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCAGTCGCCTGCTG                                                                                <  1:502647/143‑1
                                                                 TGGACTGCTGGGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCAGTCGCCTGCTGA                                                                               >  1:961996/1‑143
                                                                     CTGCTGGGCTAAAATACGGTGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTCCTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCAGTCGCCTGCTGAACAG                                                                           <  2:129539/143‑1
                                                                     CTGCTGGGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCGCTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCAGTCGCCTGCTGAACAG                                                                           <  1:249414/143‑1
                                                                     CTGCTGGGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCAGTCGCCTGCTGAACAG                                                                           <  2:939570/143‑1
                                                                      TGCTGGGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCAGTCGCCTGCTGAACAGG                                                                          >  1:786822/1‑143
                                                                      TGCTGGGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGCACTTCGACGCTTTTACACCTGGCGCTACGGCCGAGGCAGTCGCCTGCGGAACGGG                                                                          >  2:865386/1‑143
                                                                        cttgtgTAAAATTCGATGTTAATAATATTTATCTGGCAACCATGTATTCAGAAACGCGTAATATGACCACGCTTCTCTACTACTGTACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCAGTCGCCTGCTGAACAGGTT                                                                        <  2:51513/137‑1
                                                                        CTGTGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCAGTCGCCTGCTGAACAGGTT                                                                        <  2:360749/143‑1
                                                                        CTGGGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCAGTCGCCTGCTGAACAGGTT                                                                        <  1:539458/143‑1
                                                                          GGGCTAAGATGCGAGGGTAGCAATGTTGACCTGGCGACCATGTGTTGAGAAGCGCGTAATATGGCCCCGCTTCGCCACTACGGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCAGTCGCCTGCTGAACAGGTTCA                                                                      <  2:171480/143‑1
                                                                          GGGCTAAAATCGCATGCCAACACTATTGACCTGTCAACCATGTATTCAGAAGCGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCAGTCGCCTGCTGAACAGGTTCA                                                                      <  2:559660/143‑1
                                                                           GGCTCAAATACGATGCCAACAATATGTACCTGGCAACCATGTCTTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCAGTCGCCTGCTGAACAGGTTCAC                                                                     <  1:554459/143‑1
                                                                           GGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCAGTCGCCTGCTGAACAGGTcgcc                                                                     >  2:184719/1‑139
                                                                           GGCGAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCGCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCAGTCGCCTGCTGAACAGGTTCAC                                                                     <  1:286771/143‑1
                                                                             CTAAAATACGATGCTAACAATATTTACCTGGCCACCCTGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACAGGACATCGACGCCTTTAAACCTGGCGCTACGTACCCCGCAGTCGACTGCTGCACAAGGTCACTA                                                                   >  2:70314/1‑143
                                                                              TAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGAAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCAGTCGCCTGCTGAACAGGGTCACTAC                                                                  >  1:211468/1‑143
                                                                               AAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCAGTCGCCTGCTGAACAGGTTCACTACT                                                                 >  1:596653/1‑143
                                                                                tacTACGACTCTGACAATATTTGCCTGTCAACCACGTATTCAGAAACGCGTCATATGACCCCGCTTCTCCACTACTGGACATCGTCGCTTTTAAACCTGGCGCTACGTGCGCGGCAGTCGCCTGCTTAACAGGTTCACTACTA                                                                <  2:852189/140‑1
                                                                                AAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCAGTCGCCTGCTGAACAGGTTCACTACTA                                                                <  1:793042/143‑1
                                                                                AAATACGATGCTAACAATATTTACCTGGCAACCAGGTAGCCAGAAACGCGTAATATGACCCCGCTTCTCCACAACAGGACAACGACGCTAAGAAACCAGGCGCTACGTGCGCGGCAGTCACCTGCTGCACAGGTTCACTACTA                                                                >  2:489638/1‑143
                                                                                 AATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCAGTCGCCTGCTGAACAGGTTCACTACTAC                                                               >  1:479116/1‑143
                                                                                  ATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCAGTCGACTGCTGAACCGGTTCAGTACTACA                                                              >  1:486584/1‑143
                                                                                   TACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCAGTCGCCTGCTGAACAGGTTCACTACTACAC                                                             <  1:666124/143‑1
                                                                                     CGATGCTATCACTATTTCCCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCAGTCGCCTGCTGAACAGGTTCACTACTACACGC                                                           <  2:288828/143‑1
                                                                                      GATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCAGTCGCCTGCTGCACGGGTTCCCTCCTACACGCC                                                          >  1:382787/1‑143
                                                                                        TGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCAGTCGCCTGCTGAACAGGTTCACTACTACACGCCGA                                                        <  1:451629/143‑1
                                                                                         GCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCAGTCGCCTGCTGAACAGGTTCACTACTACACGCCGAC                                                       >  1:523557/1‑143
                                                                                         GCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCAGTCGCCTGCTGAAAAGGTTCACTCCTACACGCCGAC                                                       >  2:419658/1‑143
                                                                                           TAACAATATTTACCTGGCAACCATGTATACAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTACACCTGGCGCTACGTGCGCGGCAGTCGCCTGCTGAACAGGTTCACTACTACACGCCGACAA                                                     >  1:584663/1‑143
                                                                                            AACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCAGTCGCCTGCTGAACCGGTTCACTACTCCACCCCGACAAC                                                    >  1:175591/1‑143
                                                                                            AACAATATTTACCTGGCAACCATGTAGTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCAGTCGCCTGCTGAACAGGTTCACTACTACACGCCGACAAC                                                    <  1:949507/143‑1
                                                                                              CAATATTTACCTGGCAACCATGTATTCAGAATCGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCAGTCGCCTGCTGAACAGGTTCACTACTACACGCCGACAACAA                                                  <  2:746069/143‑1
                                                                                              CAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCAGTCGCCTGCTGAACAGGTTCACTACTACACGCCGACAACAA                                                  >  1:145057/1‑143
                                                                                              CAATACTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCAGTCGCCTGCTGAACAGGTTCACTACTACACGCCGACAACAA                                                  <  1:578048/143‑1
                                                                                                    TTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTACACCTGGCGCTACGTGCGCGGCAGTCGCCTGCTTAACAGGTTCCCTACTACACGCCGACAACAATAAAcc                                            >  1:429122/1‑141
                                                                                                      ACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCAGTCGCCTGCTGAACAGGTTCACTACTACACGCCGCCAACAATAAAGCGG                                          >  1:232779/1‑143
                                                                                                       CCTGGCAACCACGTATTCAGAAACGCGTACTATGCCCCCGCGTCTCCACTACTGGACATCGACGCTTTTAAGCCTGGCGCTACGCGCGCGGCAGTCGCCTGCTGAACAGGTTCACTACTACACGCCGACAACAATAAAGCGGC                                         <  2:32948/143‑1
                                                                                                         TGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCAGTCGCCTACTGAACAGGGTCACTACTACACGCCGACAACAATAAAGCGGCcc                                       >  2:139209/1‑141
                                                                                                          GGCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATAGACGCTTTTAAACCTGGCGCTACGTGCGCGGCAGTCGCCTGCGGAACAGGTTCACTACTGCACGCCGACAACAATAAAGCGGCACA                                      >  1:350436/1‑143
                                                                                                           GCAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGGGCTACGTGTGCGGCAGTAGCCTGCTGAACAAGTTCACTTCTACACCACTACAACAATAACGCGGCACAC                                     >  1:961520/1‑143
                                                                                                            cgACCATGTATTCAGAGACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCAGTCGCCTGCTGAACAGGTTCACTACTACACGCCGACAACAATAAAGCGGCACACC                                    <  2:27585/141‑1
                                                                                                            CAACCATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCAGTCGCCTGCTGAACAGGTTCACTACTACACGCCGACAACAATAAAGCGGCACACC                                    <  2:471770/143‑1
                                                                                                             AACCATGTAATCAGAAACGCGTAAGATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGGGCGCGGCAGTCGCCTGCTGAACAGGTTCACTACTACACGCCGACAACAATAAAGCGGCACACCC                                   <  1:319969/143‑1
                                                                                                                CATGTATTCAGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCAGTCGCCTGCTGAACAGGTTCACTACTACACGCCGACAACAATAAAGCGGCACACCCTAC                                >  1:641500/1‑143
                                                                                                                         AGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCAGTCGCCTGCTGAACCGGCTCACCACTACACGCCGACACCACTAAAGCGGCACACCCTACCCCCAACGC                       >  1:873513/1‑143
                                                                                                                         AGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCAGTCGCCTGCTGAACAGGTTCACTACTACACGCCGACAACAATAAAGCGGCACACCCTACCCAAAACGC                       >  2:881656/1‑143
                                                                                                                         AGAAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCAGTCGCCTGCTGAACAGGCTCACTACCACACGTAGACAAAAATAAAGCGGCACACCCTACCCAAAACGC                       <  1:1001699/143‑1
                                                                                                                           AAACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCAGTCGCCTGCTGAACAGGTTCACTACTACCCGCCGACCACAATAAAGCGGCACACCCTACCCACAACGCTG                     >  2:200212/1‑143
                                                                                                                             ACGCGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCAGTCGCCTGCTGAACAGGTTCACTACTACACGCCGACAACAATAAAGCGGCACACCCTACCCAAAACGCTGCT                   >  1:764090/1‑143
                                                                                                                              CGCGTAATATGACCCCGTTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGGTACGTGCGCGGCAGTCGCCTGCTGAACAGGTTCACTACTACACGCCGACAACAATAAAGCGGCACACCCTACCCAAAACGCTGCTC                  <  2:842179/143‑1
                                                                                                                                CGTAATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCAGTCGCCTGCTGAACAGGTTCACTACTACACGCCGACAACAATAAAGCGGCACACCCTACCCAAAACGCTGCTCGC                <  1:401291/143‑1
                                                                                                                                 GTAATCTGACCCCCCTTCCCCCCTACTGGACATCGACGCTTTTAACCCTGGCGCTACGTGCGCTGCAGTCGCCTGCCGAACAGGTTCACTACTACACGCCGACAACAATAAAGCGGCACACCCTACCCAAAACGCTGCTCGCA               <  1:35812/143‑1
                                                                                                                                    ATATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCAGTCGCCTGCTGAACAGGTTCACTACTACACGCCGACAACACTAACGCGGCACACCCGACCAGCACCGCTGCTCGCCTCT            >  1:772081/1‑143
                                                                                                                                     TATGACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCAGTCGCCTGCTGAACAGGTTCACTACTACACGCCGACAACACTCAAGCGGCACACCCTACCCAAAACGCCGCTCGCtgctt           >  2:340813/1‑138
                                                                                                                                         ACCCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCAGTCGCCTGCTGAACAGGTTCACTACTACACGCCGACAACAATAAAGCGGCACACCCTACCCAAAACGCTGCTCGCATCTATTCT       >  2:77075/1‑143
                                                                                                                                           CCCGCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCAGTCGCCTGCTGAACAGGTTCACTACTACACGCCGACAACAATAAAGCGGCACACCCTACCCAAAACGCTGCTCGCATCTTTTCTTC     >  1:606122/1‑143
                                                                                                                                                                                                                                                                                             
CCTCTTCTGACCGCACCAATGACCAGGTTAACCATACTGCGGCGGGTGGTGATAAAGCAGACGCGTGGACTGCTGGGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1436238‑1436096
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gCTTCTCCACTACTGGACATCGACGCTTTTAAACCTGGCGCTACGTGCGCGGCAGTCGCCTGCTGAACAGGTTCACTACTACACGCCGACAACAATAAAGCGGCACACCCTACCCAAAACGCTGCTCGCATCTTTTCTTCCTC  <  NC_000913/1441187‑1441046

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.