| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 556631 = | 5 (0.490) | 3 (0.310) | 3/246 | NT | 38.3% | intergenic (‑78/+30) | ybcI/ybcJ | conserved inner membrane protein YbcI/putative RNA‑binding protein YbcJ |
| ? | NC_000913 | 556653 = | 5 (0.520) | intergenic (‑100/+8) | ybcI/ybcJ | conserved inner membrane protein YbcI/putative RNA‑binding protein YbcJ | |||||
ATAGGGGAACGGCGGCGTGCGTAATAACGGTTGGCATGATGGTCGCTTCGGCAAAATGTCGATGCTATCAGCATGGATGAACGGGGCGTAGAGGGCAAAAGTCTGAAAAGAGAACCGGCCTGTTGATACAGGCCGGGAAAGGGATCAGGCAACAACCTGTACGCTGTGACCTGCAAAACTCACTGTCTGACCGGCGACGATTTTGCAGCGTTTGCGCGTTTCAACCGCACCGTCGACTTTCACCTGGCCTTCGGCAATCGCGATTTTCGCCTGCGCGCC > NC_000913/556517‑556795 | aTAGGGGAACGGCGGCGTGCGTAGTAACGGTTGGCATGATGGTCGCTTCGGCAAAATGTCGATGCTATCAGCATGGATGAACGGGGCGTAGAGGGCAAAAGTCTGAAAAGAGAACCGGCCTGTTGATACAGGCCGGGAAAggg > 1:149460/1‑143 (MQ=255) tgaaagtcgacggtgcggttgaaacgcgcaaacgctgcaaaatcgtcgccggtcagacagtgcgttttgcaggtcacagcgtacaggttgttgcctgatccctttcCCGGCCTGTTGATACAGGCCGGGAAAGGGATCAGGca > 1:102268‑M1/107‑143 (MQ=255) aTGCTATCAGCATGGATGAACGGGGCGTAGAGGGCAAAAGTCTGAAAAGAGAACCGGCCTGTTGATACAGGCCGGGAAAGGGATCAGGCAACAACCTGTACGCTGTGACCTGCAAAACTCACTGTCTGACCGGCGACGAtttt > 1:194422/1‑143 (MQ=255) agacagtgagttttgcaggtcacagcgtacaggttgttgcctgatccctttcCCGGCCTGTTGATACAGGCCGGGaaa < 1:99639‑M1/26‑1 (MQ=255) agacagtgagttttgcaggtcacagcgtacaggttgttgcctgatccctttcCCGGCCTGTTGATACAGGCCGGGaaa > 2:99639‑M1/53‑78 (MQ=255) ggCAAAAGTCTGAAAAGAGAACCGGCCTGTTGATACAGGCCGGGAAAGGGATCAGGCAACAACCTGTACGCTGTGACCTGCAAAACTCACTGTCTGACCGGCGACGATTTTGCAGCGTTTGCGCGTTTCAACCGCACCGTCGa > 1:143877/1‑143 (MQ=255) tgcctgatccctttcccggcctgtatcaacaggccggGAAAGGGATCAGGCAACAACCTGTACGCTGTGACCTGCAAAACGCACTGTCTGACCGGCGACGATTTTGCAGCGTTTGCGCGTTTCAACCGCACCGTCGACTTTCa > 1:102268‑M2/38‑143 (MQ=255) tCTGAAAAGAGAACCGGCCTGTTGATACAGGCCGGGAAAGGGATCAGGCAACAACCTGTACGCTGTGACCTGCAAAACTCACTGTCTGACCGGCGCCGATTTTGCAGCGTTTGCGCGTTTCAACCGCACAGACGACTTTCAcc > 1:68960/1‑143 (MQ=255) agagAACCGGCCTGTTGATACAGGCCGGGAAAGGGATCAGGCAACAACCTGTACGCTGTGACCTGCAAAACTCACTGTCTGACCGGCGACGATTTTGCAGCGTTTGCGCGTTTCAACCGCACCGTCGACTTTCACCTGGCCtt < 2:149460/143‑1 (MQ=255) tttcccggcctgtatcaacaggccggGAAAGGGATCAGGCAACAACCTGTACGCTGTGACCTGCAAAACTCACTGTCt < 1:99639‑M2/52‑1 (MQ=255) tttcccggcctgtatcaacaggccggGAAAGGGATCAGGCAACAACCTGTACGCTGTGACCTGCAAAACTCACTGTCt > 2:99639‑M2/27‑78 (MQ=255) gATACAGGCCGGGAAAGGGATCAGGCAACAACCTGTACGCTGTGACCTGCAAAACTCACTGTCAGACCGGCGACGATTTTGCAGCGTTTGCGCGTTTCAACCGCACCGTCCACCCTCCCCCGGCCTGCTGCAAACGCGAtctt > 2:15118/1‑143 (MQ=255) acaggccggGAAAGGGATCAGGCAACAACCTGTACGCTGTGACCTGCAAAACTCACTGTCTGACCGGCGACGATTTTGCAGCGTTTGCGCGTTTCAACCGCACCGTCGACTTTCACCTGGCCTTCGGCAATCGCGATTTTCGc < 1:179976‑M2/134‑1 (MQ=255) gAAAGGGATCAGGCAACAACATGTACGCTGTGACCTGCAAAACTCACTGTCTGACCGGCGACGATTTTGCAGCGTTTGCGCGTTTCAACCGCACCGTCGACTTTCACCTGGCCTTCGGCAATCGCGATTTTCGCCTGCGcgcc < 1:157739/143‑1 (MQ=255) | ATAGGGGAACGGCGGCGTGCGTAATAACGGTTGGCATGATGGTCGCTTCGGCAAAATGTCGATGCTATCAGCATGGATGAACGGGGCGTAGAGGGCAAAAGTCTGAAAAGAGAACCGGCCTGTTGATACAGGCCGGGAAAGGGATCAGGCAACAACCTGTACGCTGTGACCTGCAAAACTCACTGTCTGACCGGCGACGATTTTGCAGCGTTTGCGCGTTTCAACCGCACCGTCGACTTTCACCTGGCCTTCGGCAATCGCGATTTTCGCCTGCGCGCC > NC_000913/556517‑556795 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |