| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,815,859 | Δ82 bp | [rph] | [rph] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3815859 | 3815940 | 82 | 38 [0] | [0] 37 | [rph] | [rph] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3815858 | 0 (0.000) | 35 (0.900) | 32/264 | 0.2 | 100% | intergenic (‑90/+5) | pyrE/rph | orotate phosphoribosyltransferase/truncated RNase PH |
| ? | NC_000913 | 3815941 = | 0 (0.000) | coding (609/687 nt) | rph | truncated RNase PH | |||||
AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTAC > NC_000913/3815801‑3816075 | acctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttgaaaatcagtttgcccccgccgccttctgccat > 1:351004‑M2/141‑141 (MQ=255) tgcttgctaagcgcaaattcaataaactggcgctgatattgtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTccc < 2:586359‑M2/6‑1 (MQ=255) aagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACtt < 1:688947‑M2/14‑1 (MQ=255) ctaattcgatccactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAatg < 2:791600‑M2/19‑1 (MQ=255) aaattcaatacacgcgcgctgatatggtttcatgtcttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAatga < 2:409477‑M2/20‑1 (MQ=255) aattcaataatctggcgctgatatggtttcatgccttcgctcctcatcttatttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAatgat < 2:542991‑M2/21‑1 (MQ=255) tcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaactcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATgcg < 2:780471‑M2/24‑1 (MQ=255) caatgaactggcgttgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATgcgc < 2:90747‑M2/25‑1 (MQ=255) atggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttacaaatcagtttgccagcgccaccttctgcCGTACGCAGCACTTCAATGCTGCGCCCGTCTGCGGTCATCACt > 2:187394‑M2/101‑143 (MQ=255) tcatgccgtcgctcctcatcttacttttctacagacaaaaaaaaaggcgactcatcagccgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCGATGATGCGCCCGTCTTCGGTCATCACTACGtt < 2:205999‑M2/48‑1 (MQ=255) ttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGCTCATCACTACGTTCATGTCgg > 2:517262‑M2/88‑143 (MQ=255) atcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCAgcgtc > 1:444426‑M2/78‑141 (MQ=255) tcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCa < 1:573655‑M2/67‑1 (MQ=255) cttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCCCTGCGGCag > 2:296722‑M2/76‑143 (MQ=255) ttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATAATGCGCCCGCCTTCGGTCATCACTAAGTGCAAGCCGGGCtcgccggcgcagact > 2:538226‑M2/71‑136 (MQ=255) tttctacagacaaaaaaaaggcgactcatcagtcgccttaaacatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCtt < 1:428228‑M2/74‑1 (MQ=255) tttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCCTCCCTACGTTCATGTCGGTCTCTACAGCAGACTCtt > 1:727140‑M2/70‑143 (MQ=255) ctacagataaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCaa < 1:410754‑M2/77‑1 (MQ=255) tttaaggcgactgatgagtcgccttaaaaataagtttgccagcgccaccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTCCGGCACAGTCTTCAACGTATTccata > 2:31398‑M2/56‑141 (MQ=255) aacagggcgactcctctgtcgccttaaaactctgtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGa < 2:762072‑M2/88‑1 (MQ=255) aaaaaggcgactcgtcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGa < 2:172086‑M2/88‑1 (MQ=255) caaggcgacttatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATc < 2:607893‑M2/90‑1 (MQ=255) gcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCCCTGCGGCCGGGCCTCCAACCGAATCCCGACCGcac > 2:514399‑M2/50‑142 (MQ=255) atcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGCGTCCTCAACGTATTCCACCTCGCAAACCGAtt > 1:688876‑M2/43‑143 (MQ=255) atcagtcgccttaaaaatcagtttgccagcgccgccttctgaCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTAGGTTCATGTCGGTCTCTGCGGCAGAGTATTCACAGTGATCCAGACCgcaaacgcctc > 2:622614‑M2/43‑138 (MQ=255) gtctaaaaaatcagcacgccagcgacgcctccagcCGTCCCCTGCACTTCAATCATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGtt < 1:155759‑M2/108‑1 (MQ=255) ccttacaaatcagttagccagcgccgccttctgcCGTCCCCTGCACGTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGTTGGGTCCGCAGCGTATTCCAGATCGCAAACCGCTTCGCCGTTc < 2:351004‑M2/109‑1 (MQ=255) atccgtttgccagcgcgaccctcttcCGTCGCCTGGATTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCTGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTcc < 2:662519‑M2/117‑1 (MQ=255) cagtttgccagcgccgccttctgcCGGCCCCTGCACTTCAATGATGCGCCCGCCCTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGa < 1:692122‑M2/119‑1 (MQ=255) agtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGAc < 1:296722‑M2/120‑1 (MQ=255) tttgccagcgccgccttctgcCGTCCAATGCACTTCAATGATGCGCCCGTCTTCCGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTATTCAACGTATTACAGATCACAAACCGCTTCGAGCTTCACAATTGCGACAg > 2:168060‑M2/22‑143 (MQ=255) ttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTCTTCCAGATCGCAGCCCGCTTCGCCGTTCACAATGCCGACAGa > 1:96854‑M2/21‑143 (MQ=255) ccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCCGCAGAAACATAAAAGTATACCAGATCGCAAACCACTTCGCCGTTCAAAATTACGACAGAAAc > 1:397191‑M2/18‑143 (MQ=255) agcgccgccttctgcCGTCCCCTGCACTGCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTg < 2:321011‑M2/128‑1 (MQ=255) ccgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGc < 1:20982‑M2/129‑1 (MQ=255) cgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGCTCATGTCGGTCTCTGCGGCAGAGTCGTCAACGCATTCCAGATCGCAAACCGCTTCGCCGACCACAATTCCGCCAGAAACAGCGgcc > 2:460355‑M2/11‑142 (MQ=255) ccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGCTCGCAAACCGCTTCGCCGTTCACAATTCCGACAAAAACTGCAGATAc > 1:650219‑M2/9‑143 (MQ=255) | AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTAC > NC_000913/3815801‑3816075 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |