| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1427774 = | 29 (0.990) | 8 (0.270) | 7/264 | NT | 22.5% | noncoding (1021/1196 nt) | IS5 | repeat region |
| ? | NC_000913 | = 1440910 | 26 (0.890) | intergenic (‑126/‑148) | ydbK/ydbJ | putative pyruvate‑flavodoxin oxidoreductase/DUF333 domain‑containing protein YdbJ | |||||
CAATAGTAATCATATGACACCCTTACATTGCGCAAATGAGGGGCGCACGAAATTGCTGCGCGCCCAGTAGTAATCTTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATCAGCGTAATGAATGTTTTGATCAAACAGAGGGCAAAAAAATAGCCATAAAAAAGTAAAAATGCGGGGCAACGCGCAGGACAGCTCTCGACGCCGCCCTCTGTGCTGCCTATTATTTATGGCGGTGTCGTTTGGCTTGAAGATCAGAGG > NC_000913/1440772‑1441049 | cAATAGTAATCATATGAAACCCTTACATTGCGCAAATGAGGGGCGCACTAAATTGCTGTGCGCTCAGTAGTAATCTTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATCAGCGTaatgaat < 1:393585/143‑1 (MQ=255)cAATAGTAATCATATGAAACCCTTACATTGCGCAAATGAGGGGCGCACGAAATTGCTGCGCGCCCAGTAGTAATCTTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATCAGCGTaatgaat < 1:69514/143‑1 (MQ=255) tAGTAATCATATGAAACCCTTACATTGCGCAAATGAGGGGCGCACGAAATTGCTGCGCGCCCAGTAGTAATCTTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATCAGCGTAATGAATGtt > 2:434516/1‑143 (MQ=255) gTAATCATATGACACCCTTACATTGCGCAAATGAGGGGCGCACGAAATTGCTGCGCGCCCAGTAGTAATCTTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATCAGCGTAATGAATGtttt > 2:183098/1‑143 (MQ=255) ctactCATATGATGCCCTTACACTGCGTCAATGAGGGCCGCACGAAATTGCTGCGCGCCCAGTAGTAATCTTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATCAGCGTAATGAATGtttt < 1:170410/139‑1 (MQ=255) tCATATGAAACCCTTACATTGCGCAAATGAGGGGCGCACGAAATTGCTGCGCGCCCAGTAGTAATCTTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATCACCGTAATGATTGTTTTGCTc > 2:367828/1‑143 (MQ=255) cATATGAAACCCTTACATTGCGCAAATGAGGGGCGCACGAAATTGCTGCGCGCCCAGTAGTAATCATCCAATTTTAGCAAATGGCTTTGCACTGCATGTACGCTTCTGTGTCCCCCACATCAGCGCAGTCAACGTTTTGACCa > 2:488756/1‑143 (MQ=255) tatGAAGCCCTTACATTGCGCAAATGAGGCGCGCACGAAATTGCTGCGCGCCCAGTAGTAATCTTTCAATTCTACCAAATGGCTTTTTTCTTCATTTTCGCTTTTGTGTCCCCCACATCAGCGTAATGAATGTTTTGATCaaa < 2:257624/143‑1 (MQ=255) atGACACCCTTACATTGCGCAAATGAGGGGCGCACGAAATTGCTGCGCGCCCAGCAGTAATCTTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATCAGCGTAATatttggtccacccgaaa > 1:219584‑M2/1‑126 (MQ=255) aacCCTTACATTGCGCAAATGAGGGGCGCACGAAATTGCTGCGCGCCCAGTAGTAATCTTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATCAGCGCAATGAATGTTTTGATCAAACagag > 1:100888/2‑143 (MQ=255) cgcgtttGAGGGGCGCACGAAATTGCTGCGCGCCCAGTAGTAATCTTTCAACTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATCAGCGTAATGAATGTTTTGATCAAACAGAGGGCAAAAAAATAg < 1:16132/137‑1 (MQ=255) aGGGGCGGACGAAATTGCTGCGCGGACACTAGTGATCTTTCAATTGTAGCAAATGGCATTCTTCTGCATTGTTGCTTTTGTGTCCACCACATCAGCGTAATGAATGATTTGATCAAACAGAGGGCAAAAAAATAGCCATaaaa < 2:204161/143‑1 (MQ=255) gggCGCACGAAATTGCTGCGCGCCCAGTAGTAATCTTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATCAGCGTAATGAATGTTTTGATCAAACAGAGGGCAAAAAAATAGCCATaaaaaa < 1:568278/143‑1 (MQ=255) ggCGCACGAAATTGCTGCGCGCCCAGTAGTAATCTTTCAATTTTAGCACATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATCAGCGTCATatttgctccacccgaaccaggctggccagggtgaataacgccgcc < 1:86735‑M2/143‑46 (MQ=255) cgcACGAAATTGCTGCGCGCCCAGTAGTAATCTTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATCAGCGTAATGAATGTTTTGATCAAACAGAGGGCAAAAAAATAGCCATAAAAAAGTa > 1:338972/1‑143 (MQ=255) cgcACGAAATTGCTGCGCGCCCAGTAGTAATCTTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATCAGCGTAATGAATGTTTTGATCAAACAGAGGGCAAAAAAATAGCCACAAAAAAGTa > 1:388375/1‑143 (MQ=255) cGAAATTGCTGCGCGCCCAGTAGTAATCTTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATCAGCGTAATatttggtccacccgaaacaggttggccagggtgaataacatcgccagttgg > 1:415134‑M2/1‑92 (MQ=255) cGAAATTGCTGCGCGCCCAGTAGTAATCTTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATCAGCGTAATatttggtccacccgaaacaggttggccagggtgaataacatcgccagttgg > 1:430129‑M2/1‑92 (MQ=255) gAAATTGCTGCGCGCCCAGTAGTAATCTTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTGTGTGTCCCCCACATCAGCGTAATGAATGTTTTGATCAAACAGAGGACAAAAAAATAGCCATAAAAAAGTAAAAAt > 2:291062/1‑143 (MQ=255) tgcGCGCCCAGTAGTAATCTTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATCCGCGTAATGAATGTTTTGATCAAACAGAGGGCACAAAAATACCCATAAACAAGTAAAAATGCGGGGCa > 2:355128/1‑143 (MQ=255) cgagtactAATCTTTCAATTGTAGCCAATGGCTTCGTTCTGCAGTTGCGCTTGTGTGTCACCCACATCAGCGTAGTGAATGTTTTGATCAAACAGAGGGCAAAAAAATAGCCATAAAAAAGTAAAAATGCGGGGCAACGCGCa < 2:397340/141‑1 (MQ=255) cAGTAGTAATCTTCCAATTTTAGCAAATGGCTTTCTCCTGCATTTTCGCTTTTGTGTCCCCCACATCAGCGTAATGAATGTTTTGATCAAACAGAGGGCAAAAAAATAGCCATAAAAAAGTAAAAATGCGGGGCAACGCGCAg < 1:64818/143‑1 (MQ=255) gtagtaATCTTTCAATTTTAGCAAATGGCTTTCTTCGGCATTTTCGCTTTTGTGTCCCCCACATAAGCGTAATGAATGTTTTGATCAAACAGAGGGCAAAAAAATAGCCATAAAAAAGTAAAAATGCGGGGCAACGCGCAGGa < 2:465146/143‑1 (MQ=255) tagtaATCTTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATCAGCGTAATatttggtccacccgaaacaggttggccagggtgaataacatcgccagttggttatcgtttttcagcagccc > 1:179215‑M2/1‑72 (MQ=255) agcTTTCACTTTTAGCAAATGGCTTTCTTCTGTATTTCCGCTTTTGTGTCCCCCACATCAGCGTAATGAATGTTTTGATCAAACAGAGGGCAAAAAAATAGCCATAAAAAAGTAAAAATGCGGGGCAACGCGCAGGACAGctc < 1:315848/141‑1 (MQ=255) aTCTTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATCAGCGTAATGAATGTTTTGATCAAACAGAGGGCAAAAAAATAGCCATAAAAAAGTAAAAATGCGGGGCAACGCGCAGGACAGctc > 1:149474/1‑143 (MQ=255) aTCTTTCAATTTTAGCAAATGGCTTTCTTCTGCATTGTCGCTTTTGTGTCCCCCACATCAGCGTAATatttggtccacccgaaacaggttggccagggtgaataacatcgccagttggttatcgtttttcggcagccccttgt < 1:137182‑M2/143‑77 (MQ=255) aaTGGCTGTCTTCTGCCGTTTCGCTTTTGTGTCCCCGACATCAGCGTAATattgggtccacccgaaacaggttggccagggtgaataacatcgccagttggttatcgtttttcagcagccccttgtatctggctttcacgaag > 1:164100‑M2/1‑50 (MQ=255) ttcttcTGCATTTTCGCTTTTGTGTCCCCCACATCAGCGTAATGAATGTTTTGATCAAACAGAGGGCAAAAAAATAGCCATAAAAAAGTAAAAATGCGGGGCAACGCGCAGGACAGCTCTCGACGCCGCCCTCTGTGCTGCCt > 1:318171/1‑143 (MQ=255) cttctGCATTTTCGCTTTTGGGTCCGCCACATCAGCGTAATGAATGTTTTGATCAAACAGAGGGCAAAAAAATAGCCATAAAAAAGTAAAAATGCGGGGCAACGCGCAGGACAGCTCTCGACGCCGCCCTCTGTGCTGCCtat < 2:212488/143‑1 (MQ=255) ttctGCATTTTCGCTTTTGTGTCCCCCACATCAGCGTAATGAATGTTTTGATCAAACAGAGGGCAAAAAAATAGCCATAAAAAAGTAAAAATGCGGGGCAACGCGCAGGACAGCTCTCGACGCCGCCCTCTGTGCTGCCtatt < 2:234652/143‑1 (MQ=255) tctGCATCTTCGCTTTTGTGCCCCCCACATCAACGTAATGAATGTTTTGATCAAACAGAGGGCAAAAAAATAGCCATAAAAAAGTAAAAATGCGGGGCAACGCGCAGGACAGCTCTCGACGCCGCCCTCTGTGCTGCCtatta < 1:448080/143‑1 (MQ=255) gCATTTTCGCTTTTGTGTCCCCCACATCAGCGTAATatttggtccacccgacacaggttggccagggtgaataacatcgccagttggttatcgtttttcagcagccccttgtatctggctttcacgaagccgaactgccgctt < 1:486217‑M2/143‑108 (MQ=255) ttttCGCTTTTGTGTCCCCCACATCAGCGTAATGAATGTTTTGATCAAACAGAGGGCAAAAAAATAGCCATAAAAAAGTAAAAATGCGGGGCAACGCGCAGGACAGCTCTCGACGCCGCCCTCTGTGCTGCCTATTATTTATg < 1:532497/143‑1 (MQ=255) ttttGTGTCCCCCACATCCGCGTAATGAATGTATTGATCAAACAGAGGGCAAAAAAATAGCCATCAAAAAGTAAAAATGCGGGGCAACGCGCAGGACAGCTCTCGACGCCGCCCTCTGTGCTGCCCAGTACTTCTGACGgtgg > 2:302624/1‑142 (MQ=255) acaGCAGCATAAGGAATGTGTAGAACAAACAGAGGGCAAAAAAATAGCCATAAAAAAGTAAAAATGCGGGGCATCGCGCAGTACAGCTCTCGACGCCGCCCTCTGTGCTGCCTATTATTTATGGCGGTGTCGTTTGGCTTGaa < 2:379945/143‑1 (MQ=255) tAATatgtggtccacccgaaacaggttggccagggtgaataacatcgccagttggttatcgtttttcagcagccccttgtatctggctttcacgaagccgaactgccgcttgatgatgcgaaacgggtgctccaccctggcac > 1:165146‑M2/1‑4 (MQ=255) | CAATAGTAATCATATGACACCCTTACATTGCGCAAATGAGGGGCGCACGAAATTGCTGCGCGCCCAGTAGTAATCTTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATCAGCGTAATGAATGTTTTGATCAAACAGAGGGCAAAAAAATAGCCATAAAAAAGTAAAAATGCGGGGCAACGCGCAGGACAGCTCTCGACGCCGCCCTCTGTGCTGCCTATTATTTATGGCGGTGTCGTTTGGCTTGAAGATCAGAGG > NC_000913/1440772‑1441049 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |