BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	566777 =	NA (NA)	913 (56.590)	224/262	NT	98.1%	noncoding (1/1258 nt)	IS3	repeat region
*	?	NC_000913	= 572471	18 (1.110)	913 (56.590)	224/262	NT	98.1%	coding (6/456 nt)	ybcN	DLP12 prophage; DNA base‑flipping protein

Only 100 of 1034 total aligned reads displayed.

GAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTATCTGGAGGAGGGCAAATGCTTTCGCATGGTGCTTAAACCGTGGCGTGAGAAACGCAGTCTTTCCCAGAATG  >  NC_000913/572329‑572610

gAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAAC                                                                                                                                             <  1:183090‑M2/143‑1 (MQ=255)

   caacTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATATAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtga                                                                                                                                          >  2:210012‑M2/1‑140 (MQ=255)

     acTCCGGTGACGTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatc                                                                                                                                        >  2:59231‑M2/1‑138 (MQ=255)

      cTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCGGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatct                                                                                                                                       <  1:100117‑M2/143‑7 (MQ=255)

      cTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATCCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatct                                                                                                                                       <  1:143265‑M2/143‑7 (MQ=255)

        ccGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatctta                                                                                                                                     >  2:169421‑M2/1‑135 (MQ=255)

         cGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgctcttac                                                                                                                                    <  2:129600‑M2/143‑10 (MQ=255)

            tGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttaccca                                                                                                                                 >  1:241423‑M2/1‑131 (MQ=255)

            tGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttaccca                                                                                                                                 >  1:122280‑M2/1‑131 (MQ=255)

             gACTTCTGCGCTAACCGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccag                                                                                                                                >  2:232440‑M2/1‑130 (MQ=255)

              aCTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagc                                                                                                                               <  1:217923‑M2/143‑15 (MQ=255)

               cTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagca                                                                                                                              >  2:134741‑M2/1‑128 (MQ=255)

                ttCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCGTCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaa                                                                                                                             <  1:113709‑M2/143‑17 (MQ=255)

                ttCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaa                                                                                                                             >  2:18700‑M2/1‑127 (MQ=255)

                   tGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCAGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatag                                                                                                                          <  1:167756‑M2/143‑20 (MQ=255)

                    gcgcTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagt                                                                                                                         >  1:160542‑M2/1‑123 (MQ=255)

                     cgcTAAACGGGGACGTTTATGCGCACACACTACCCAATCTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtg                                                                                                                        >  1:302173‑M2/1‑122 (MQ=255)

                      gcTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtgg                                                                                                                       >  2:44486‑M2/1‑121 (MQ=255)

                      gcTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtgg                                                                                                                       <  1:197475‑M2/143‑23 (MQ=255)

                      gcTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaacagtgg                                                                                                                       <  2:121404‑M2/143‑23 (MQ=255)

                      gcTAAACGGGGACGTTTATGCGCACATACAATCCAAACGCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtgg                                                                                                                       >  2:113476‑M2/1‑121 (MQ=255)

                       cTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtgga                                                                                                                      >  1:20657‑M2/1‑120 (MQ=255)

                        tAACCGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTACCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggac                                                                                                                     >  1:284846‑M2/1‑119 (MQ=255)

                          aaCGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacac                                                                                                                   <  1:150323‑M2/143‑27 (MQ=255)

                            cGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgc                                                                                                                 <  1:51043‑M2/143‑29 (MQ=255)

                             ggggACGTTTATGCGCACATACAATCCAAACTCTCTTCTGCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcg                                                                                                                >  2:306452‑M2/1‑114 (MQ=255)

                              gtgacGTTGATGCGGACATACATTCCAACCTCTCTTCTCCCTTCACAGATGCAGAAATGTACCTGCAATTCTTTTCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcgg                                                                                                               >  2:117229‑M2/3‑113 (MQ=255)

                               ggACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggc                                                                                                              >  1:116015‑M2/1‑112 (MQ=255)

                                   gTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTATTTGCATCTCGCGTTTGCCCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaataggggtcccgcggctacg                                                                                                          <  1:172614‑M2/143‑36 (MQ=255)

                                    tttATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagt                                                                                                         >  1:296200‑M2/1‑107 (MQ=255)

                                    tgtatGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagt                                                                                                         >  1:138770‑M2/3‑107 (MQ=255)

                                     ttATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtg                                                                                                        <  1:307437‑M2/143‑38 (MQ=255)

                                      tATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtga                                                                                                       >  1:47069‑M2/1‑105 (MQ=255)

                                        tGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGACCAAGCGTGAACtgatcttacccagcaatagtgggcacgcggcgaagtgagt                                                                                                     <  2:192335‑M2/143‑41 (MQ=255)

                                          cgcACATGCAATCCAAACATACCTTTTCCTTCACAGATGCAGAAATGCACCTGCCATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaa                                                                                                   >  2:125629‑M2/1‑101 (MQ=255)

                                            cacaTACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaac                                                                                                 >  1:84790‑M2/1‑99 (MQ=255)

                                             acaTACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGAACTGTGTCTGGGGGATGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaact                                                                                                <  1:234225‑M2/143‑46 (MQ=255)

                                                 cgaagccACACTCTCTTCTCCCCTCACAGCTGCAGAAATGCACCTGCAAGTCTTTGCATCTAGCGTTTGACCGCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTAtcg                                                                                            <  2:34317/138‑1 (MQ=255)

                                                 aCAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATTTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctca                                                                                            >  1:178590‑M2/1‑94 (MQ=255)

                                                   gacccaatCTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagt                                                                                          >  2:274692‑M2/4‑92 (MQ=255)

                                                     tCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtca                                                                                        <  1:228585‑M2/143‑54 (MQ=255)

                                                       caccgcctcttctcccTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcaga                                                                                      >  1:267004‑M2/7‑88 (MQ=255)

                                                       cAAACTCTCTTCTCACTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaagagtggacacgcggcaaagggagaaaaccctcagcaaga                                                                                      <  2:82142‑M2/143‑56 (MQ=255)

                                                        aaaCTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagag                                                                                     <  1:103606‑M2/143‑57 (MQ=255)

                                                         aaCTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaacctctccgtcacagg                                                                                    <  1:36040‑M2/143‑58 (MQ=255)

                                                            tctctTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtga                                                                                 >  2:88041‑M2/1‑83 (MQ=255)

                                                            tctctTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtga                                                                                 >  1:261957‑M2/1‑83 (MQ=255)

                                                                ttctCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagcgagcaaactctcagtcagaggtgactcg                                                                             <  2:220360‑M2/143‑65 (MQ=255)

                                                                 tctcCCTTCACAGATGCGGAAATGCACCTGCAATTCTTTGCATCTAGCGTTGGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcac                                                                            >  2:41722‑M2/1‑78 (MQ=255)

                                                                 tctcCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcac                                                                            >  1:257461‑M2/1‑78 (MQ=255)

                                                                   tcCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacat                                                                          <  2:2645‑M2/143‑68 (MQ=255)

                                                                   tcCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacat                                                                          >  2:295632‑M2/1‑76 (MQ=255)

                                                                     ccTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGCACtgatcttacccagcaatagtggacacgcggctacgtgagtacactctcagtcagaggtgactcacatgc                                                                        <  1:314970‑M2/143‑70 (MQ=255)

                                                                     ccTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatga                                                                        <  1:41109‑M2/143‑70 (MQ=255)

                                                                      cTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggcgaagtgagtaaactctcagtcagaggtgactcacatgac                                                                       <  1:250172‑M2/143‑71 (MQ=255)

                                                                            aGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacctgacaaaaac                                                                 <  2:72183‑M2/143‑77 (MQ=255)

                                                                             tatGCAGAAATGCAACGGCAAGTCTTTGGATCTAGCGTTTGGCCTCTGCGGAGGGGGAGCGTTAACtgatcttacccaggaatagtagacacgcgtctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaaca                                                                >  2:302856‑M2/2‑66 (MQ=255)

                                                                                 cAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtggtcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtat                                                            >  2:258950‑M2/1‑62 (MQ=255)

                                                                                 cAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtat                                                            >  2:163051‑M2/1‑62 (MQ=255)

                                                                                   gAAAGGCACCTGCAATTCTTTGCAGCTAGCGGTCTACCGCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaataggggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatca                                                          >  1:58070‑M2/1‑60 (MQ=255)

                                                                                     aaTGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaac                                                        >  2:203225‑M2/1‑58 (MQ=255)

                                                                                       tGCACCTGCAATTCTTTGCATCTAGCGGTCGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgacccacatgacaaaaacagtatcaacca                                                      >  2:315646‑M2/1‑56 (MQ=255)

                                                                                         cACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaacaacagtatcaaccagt                                                    <  2:278303‑M2/143‑90 (MQ=255)

                                                                                         cACCTGCAATGCTTTGCATCGAGCGTTGGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagcggtgactcacatgacaaaaacagtatcaaccagt                                                    >  1:28912‑M2/1‑54 (MQ=255)

                                                                                          aCCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGCAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgcctcacatgacaaaaaccgtatcaaccagta                                                   <  2:549‑M2/143‑91 (MQ=255)

                                                                                          aCCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctccgtcagaggtgactcacatgaccaaaacagtatcaaccagta                                                   <  1:187393‑M2/143‑91 (MQ=255)

                                                                                             tGCAATTATTTGCATCGAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaa                                                >  2:284657‑M2/1‑50 (MQ=255)

                                                                                              gCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtcgccacgcggctaagtgagtaaactctcagtcagcggtgactcacatgacaaaaacagtatcaaccagtaaaaa                                               <  1:212670‑M2/143‑95 (MQ=255)

                                                                                               cacctctttGCATCGAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaa                                              >  2:253751‑M2/5‑48 (MQ=255)

                                                                                                  gtgtgtccatccagcGTTTGGCCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagccctagtgggcacgctgctaagggagtaaactcccagtcagaggttactcacatgacaaaaacagtatcaaccagtaaaaaaccc                                           >  2:154153‑M2/8‑45 (MQ=255)

                                                                                                   tCTTTGCATCTAGCGTTTGACCTCTGCGGATGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaacccc                                          >  2:93807‑M2/1‑44 (MQ=255)

                                                                                                    cTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtccgagatgactggcatcacagaaacagtatcaagccgaaaaaaacaccg                                         <  2:21585‑M2/143‑101 (MQ=255)

                                                                                                     tttGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgt                                        <  1:202652‑M2/143‑102 (MQ=255)

                                                                                                         cATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaac                                    >  1:78952‑M2/1‑38 (MQ=255)

                                                                                                          acctaGCGTTTGACCTGTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactcccagtcagaggtgcctcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaaca                                   >  1:97718‑M2/3‑37 (MQ=255)

                                                                                                          aTCAAGCGGTGGACGTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaaca                                   >  1:7166‑M2/1‑37 (MQ=255)

                                                                                                           tCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacag                                  <  1:91869‑M2/143‑108 (MQ=255)

                                                                                                             tAGCGTTTGACCTCTGCGGAGGGGAAGCGGGGAAggatcgtagccagcgatagtgggcacgcggctaagtgagtaaactctccgtcagaggtgactcacatgacaaaaacagtatcaaccggtaaaagacgccgtaaacagca                                <  1:321766‑M2/143‑110 (MQ=255)

                                                                                                               gCGTTTGACCTCTGCGGAGGGGTAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcatt                              >  2:270471‑M2/1‑32 (MQ=255)

                                                                                                               gCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgagcaagagtctcgcgacgagtaaaaaaccccgtaaccagcatt                              <  1:133143‑M2/143‑112 (MQ=255)

                                                                                                               gCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaagaacagtatcaaccagtaaaaaaccccgtcaacagcatt                              <  2:103208‑M2/143‑112 (MQ=255)

                                                                                                                  tttGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaacaatttgctaccagtaaaaaaccccgtaaacagcattcgc                           >  1:220666‑M2/1‑29 (MQ=255)

                                                                                                                  tttGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaagaaaccacgtaaacagcattcgc                           <  2:238515‑M2/143‑115 (MQ=255)

                                                                                                                     gACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcactagtggacacgcggctacgtgagtaaaccctcagtcagaggtgactcacatgacaaaaacagtatcaaccaggaaaaaaccccgtcaacagcactcacctc                        <  2:290636‑M2/143‑118 (MQ=255)

                                                                                                                     gACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaaccgcattcggctg                        <  1:106749‑M2/143‑118 (MQ=255)

                                                                                                                      aCCTCTGCGGAGGGGAAGCGTGAACtgatcttaccccgcaatagtggacacgcggctaagtgagtaaactcgcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcatacgcctga                       <  2:149003‑M2/143‑119 (MQ=255)

                                                                                                                      aCCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctga                       <  1:192338‑M2/143‑119 (MQ=255)

                                                                                                                        ctctGCGGAGGGGAAGCGTGAACtgatcttacccagcgatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacaccattcgcccgact                     <  2:198096‑M2/143‑121 (MQ=255)

                                                                                                                        ctctGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggcgaagtgagtaaactctcagtcagaggtgactcacatgacacaaacagtatccacccgtaaaaaaccccgtaaccagcattcgcctgaag                     <  2:145054‑M2/143‑121 (MQ=255)

                                                                                                                         tctGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatt                    <  1:272919‑M2/143‑122 (MQ=255)

                                                                                                                         tctGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactcgcactcagaggtgacacacatgacaaaaacagtatcaaccagtaaaaaaacccatcaacaacatacgcccgaatc                    <  2:247738‑M2/143‑122 (MQ=255)

                                                                                                                            gCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcg                 >  1:278823‑M2/1‑19 (MQ=255)

                                                                                                                            gCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcg                 >  2:77380‑M2/1‑19 (MQ=255)

                                                                                                                             cGGAGGGGAAGCGCGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtaccaaccagtcaaaaaccccgtaaacagcattcgcctgaatttcgc                >  1:75424‑M2/1‑18 (MQ=255)

                                                                                                                                aGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagt             <  2:174849‑M2/143‑129 (MQ=255)

                                                                                                                                      aGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaacagtgaggcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaagcc       >  1:147310‑M2/1‑9 (MQ=255)

                                                                                                                                        cGTGAACtgatcttacccagcaagagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaagccct     >  2:182308‑M2/1‑7 (MQ=255)

                                                                                                                                         gTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaagccctg    <  1:64098‑M2/143‑138 (MQ=255)

                                                                                                                                           gAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaacaacagtatcaaccagtaacaaaacccggaaacagcagtcgcctgaatttcgcagtgaagctctaaa  <  2:226268‑M2/143‑140 (MQ=255)

                                                                                                                                           gAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaagccctgaa  >  2:62629‑M2/1‑4 (MQ=255)

GAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTATCTGGAGGAGGGCAAATGCTTTCGCATGGTGCTTAAACCGTGGCGTGAGAAACGCAGTCTTTCCCAGAATG  >  NC_000913/572329‑572610

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 13 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.