New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 315852NA (NA)29 (0.610) 15/272 2.5 NA noncoding (624/1255 nt) IS3 repeat region
?NC_000913 = 315875 NA (NA)noncoding (647/1255 nt) IS3 repeat region

Only 100 of 210 total aligned reads displayed.

ACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGTGGCGGCAAGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/315707‑315852
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGTC  <  NC_000913/315875‑315734
                                                                                                                                                                                                                                                                                                
ACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCCAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAAAGTAAAAACAGTGACGGCAAG                                                                                                                                                   >  1:881476/1‑143
ACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACCGCTTTACGGTGCCCCACGCCTGACGGATGAGCTGCGTGCTCCAGGTTACCCCTTGACCGTAACAACCCTGGCGGCAAG                                                                                                                                                   >  1:221443/1‑143
ACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTCACGTAAAAACCGTGGCGGCAAG                                                                                                                                                   >  2:774570/1‑143
ACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGTGGCGGCAAG                                                                                                                                                   >  1:689215/1‑143
ACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGTGGCGGCAAG                                                                                                                                                   <  2:747691/143‑1
ACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGTGGCGGCAAG                                                                                                                                                   >  1:239605/1‑143
ACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGTGGCGGCAAG                                                                                                                                                   >  1:498559/1‑143
ACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGCGGCGGCAAG                                                                                                                                                   >  1:391657/1‑143
 CGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTAGCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGGTGAACTGCGTGCTCAGCGTTACCCCATTCACGTAAAAACCGTGGCGGCAAGC                                                                                                                                                  >  1:709574/1‑143
 CGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGTGGCGGCAAGC                                                                                                                                                  <  2:208793/143‑1
 CGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGTGGCGGCAAGC                                                                                                                                                  <  1:744381/143‑1
 CGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGTGGCGGCAAGC                                                                                                                                                  <  1:593220/143‑1
 CGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGTGGCGGCAAGC                                                                                                                                                  >  1:270655/1‑143
  GCGTCAGCAGTTCCGGCAACACGGCAACAGCGTTGTCCTCGCGGCTTTTACGCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGATCAGGGTTAACCCTTTGACGTACAAAACGTGGCGGCAAGCC                                                                                                                                                 >  2:456323/1‑143
  GCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAACACAGCGTTCCGGTGCCCCACGCCTGACGGCTGAACTGCGTGCTCCGGGTTACCCCTTTCACCAAAAAACCGTGGCGGCCAGCC                                                                                                                                                 >  2:390101/1‑143
  GCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCCGGGTCCCCCCTTTACCGTCAAAACCGGCGCGGCCAGCC                                                                                                                                                 >  2:82938/1‑143
  GCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTACCGCAAAAACCGCGGCGGCAAGCC                                                                                                                                                 >  2:394432/1‑143
  GCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAGCCGTGGCGGCGAGCC                                                                                                                                                 >  1:453945/1‑143
  GCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGTGGCGGCCAGCC                                                                                                                                                 >  2:110755/1‑143
  GCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGAGGCGGCAAGCC                                                                                                                                                 >  1:544767/1‑143
  GCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTCAACGTCAAACCCGTGGCGGCCAGCC                                                                                                                                                 >  2:235190/1‑143
  GCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGAGTTACGGTGCCACACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGTGGCGGCAAGCC                                                                                                                                                 >  1:850074/1‑143
  GCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACACGGTCAAAACAGCGTTACGGTGCCACACGACTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGTGCGGGCAAGCC                                                                                                                                                 >  1:766232/1‑143
  GCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTGTTACCCGGTCACAAAAGCGTTGCGGAGCCCCACGCCTGACGGATGACCTGCACGCTCAGGGTTACACCTTTAACATAACAACCCTGGCGGCCAGCC                                                                                                                                                 >  2:179711/1‑143
  GCGTCAGCAGTTACGCCAACGCTGCGACCGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGTGGCGGCAAGCC                                                                                                                                                 <  2:491570/143‑1
   cggCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGTGGCGGCAAGCCT                                                                                                                                                <  1:677128/140‑1
   CGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGTGGCGGCAAGCCT                                                                                                                                                <  2:168582/143‑1
   CGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGTGGCGGCAAGCCT                                                                                                                                                <  1:87375/143‑1
   CGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGTGGCGGCAAGCCT                                                                                                                                                <  2:585237/143‑1
   CGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGTGGCGGCAAGCCT                                                                                                                                                <  1:799544/143‑1
   CGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGTGGCGGCAAGCCT                                                                                                                                                <  1:773200/143‑1
   CGTCAGCAGTTCCGCCAACACTGCGACAGCATTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGTGGCGGCAAGCCT                                                                                                                                                <  1:747941/143‑1
   CGTCACTAGTTGCGCCAACGCTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGTGGCGGCAAGCCT                                                                                                                                                <  1:152642/143‑1
       AGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGGTACCCCTTTAACGTAAAAACCGTGGCGGCAAGCCTacgc                                                                                                                                            >  1:42322/1‑139
                       CTGCGACCGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGTGGCGGCAAGCCTGCGCCCTCAGTCCCTGACGG                                                                                                                            <  1:282546/143‑1
                       CTGCGACAGCGTTGTCCGCGCGGCTTTTACCCGGTCAAAACCGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGTGGCGGCAAGCCTGCGCCCTCAGTCCCTGACGG                                                                                                                            <  2:898394/143‑1
                          CGACAGCGGCGTCCGCGCGGCTTTTACTCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGTGGCGGCAAGCCTGCGCCCTCAGTCCCTGACGGCGC                                                                                                                         <  1:340177/143‑1
                           GACAGCGTTGTCCTCGCGGCTTGTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGTGGCGGCAAGCCTTTGCCCTCAGTCCCTGACGGCGCA                                                                                                                        <  2:632884/143‑1
                            ACAGCGTTGTCCTCGCGGTGGGTACCCGGTCAACACAGCGTTACGGTGCCCCACGCCTGACGGATCAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGTGGCGGCAAGCCTTTGCCCTCAGTCCCTGACGGCGCAG                                                                                                                       <  2:680179/143‑1
                              AGCGTTGTCCTCGCGGCTTGTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGTGGCGGCAAGCCTTTGCCCTCAGTCCCTGACGGCGCAGGC                                                                                                                     <  1:177178/143‑1
                              AGCGTTGTCCGCGCGGCTGTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAACCCGTGGCGGCAAGCCTTTGCCCTCAGTCCCTGACGGCGCAGGC                                                                                                                     <  1:84074/143‑1
                                cggTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTCCCCCACGCCTGACCGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGTGGCGGCAAGCCTTTGCCCTCAGTCCCTGACGGCGCAGGCTT                                                                                                                   <  1:132928/140‑1
                                     TCCTCGCTGCCTTGACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAGCGTAAGAACCGTGGCGGCAAGCCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGC                                                                                                              <  2:73538/143‑1
                                        TCGCGGCTGTTACCCGTTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGTGGCGGCAAGCCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCAC                                                                                                           <  2:219620/143‑1
                                                                                                                                            agggCTTTGCCCTCAGCCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACG       <  1:120021/139‑1
                                                                                                                                              GCCTTTGTCCTCACACCCTGACGGCGCCGTCTTGCTGCCACGGGTTTGACGTTAAAGGGGTAACCATGAGCACGCATTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAATCCGCGAGGACAACGCT     <  2:133460/143‑1
                                                                                                                                              GCCTTTGCCCTCTGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCT     <  2:299561/143‑1
                                                                                                                                              GCCTTTGCCCTCAGTCCCTGGCGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAGCGCTGTTTTGACCGGGTAAGAGCCGCGAGGACAAGGCT     >  1:24497/1‑143
                                                                                                                                              GCCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGGCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCT     <  2:101670/143‑1
                                                                                                                                              GCCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAGGGGGTAACCCTGAGCACGCAGGTCGTCCGTCAGGCGTGGGGCACGGTGACGCTGTTTTGACCGGGTAAGGGCGGCGGGGACAGCGCT     >  2:79669/1‑143
                                                                                                                                              GCCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTACCCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCAGTTCTGACCGGGTGAAAGCCGCGAGGACAACGCT     >  2:186777/1‑143
                                                                                                                                              GCCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCT     <  1:601701/143‑1
                                                                                                                                              GCCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCT     >  2:511901/1‑143
                                                                                                                                              GCCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCT     >  1:555620/1‑143
                                                                                                                                              GCCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCT     >  1:28367/1‑143
                                                                                                                                              GCCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCT     <  1:277089/143‑1
                                                                                                                                              GCCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATACGTCAGGCGTGGGGCACCGTAACGCTGCTTTGACAGGGTAAAAGCCGCGACGACAACGCT     >  2:691871/1‑143
                                                                                                                                              GCCTTTGCCCTCAGTCCCCGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCT     <  1:896840/143‑1
                                                                                                                                              GCCTGTGCCTTCAGCCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTCAAAGGGGTAGCCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCT     <  2:590089/143‑1
                                                                                                                                              GCCTGTCCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCT     <  2:701933/143‑1
                                                                                                                                               CCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGCCCGGGTAAAAGCCGCGAGGACAACGCTG    >  1:260357/1‑143
                                                                                                                                               CCTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTG    >  2:297423/1‑143
                                                                                                                                                CTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCCCGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACACTGT   >  2:271227/1‑143
                                                                                                                                                CTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTACCGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTCTTGACCGGATAAAAGCCGCGAGGACACCGCTGT   >  2:371498/1‑143
                                                                                                                                                CTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCCCGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGCGTACAAGCCGCGAGGACAACGCTGT   >  1:310200/1‑143
                                                                                                                                                CTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCCGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGCCCGGGTAAAAGCCGCGAGGGCCGCGCTGT   >  1:491597/1‑143
                                                                                                                                                CTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCATTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGT   >  1:478702/1‑143
                                                                                                                                                CTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCGTCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGT   >  1:231761/1‑143
                                                                                                                                                CTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCTTGGGGCAaag                                              >  1:325139/1‑97
                                                                                                                                                CTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTTGGGGACCGTAACGCTGTTTTGACCGGGTAAAAGGCGCGAGGACAGCGCTGT   >  1:6504/1‑143
                                                                                                                                                CTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGGGAGGACAACGCTGT   >  2:831405/1‑143
                                                                                                                                                CTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACCACGCTG  >  2:332728/1‑142
                                                                                                                                                CTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGT   >  1:505896/1‑143
                                                                                                                                                CTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGT   >  1:507651/1‑143
                                                                                                                                                CTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGT   >  1:622305/1‑143
                                                                                                                                                CTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGT   >  2:481916/1‑143
                                                                                                                                                CTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGT   >  2:510653/1‑143
                                                                                                                                                CTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGACCACGCAGTTCATCCGCCAGGCGCGGGGCACCGTAACGCTGTTTTGACCGTGTAAACGCCGCGAGGACAACGCTGT   >  2:147228/1‑143
                                                                                                                                                CTTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGTC  >  2:611792/1‑143
                                                                                                                                                CTTTGCCCGCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGT   <  1:159239/143‑1
                                                                                                                                                 TTTGCCTTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAGCCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGTC  <  2:320155/143‑1
                                                                                                                                                 TTTGCCCTGAGTCCCTGCCGGCGCAGTCTTGCTGCCACGTTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACCCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGTC  <  2:729006/143‑1
                                                                                                                                                 TTTGCCCTCAGTCCCTGCCGGCGCAGGCTTGCCGCCACGGTGTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTGCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGTC  <  1:370146/143‑1
                                                                                                                                                 TTTGCCCTCAGTCCCTGACGGCGCCGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAAACCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTAACCGGATAAAAGAGGCGAGGAGCACGCGGTC  >  2:557466/1‑143
                                                                                                                                                 TTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAGAGCCGCCAGGACAACGCTGTC  >  2:356470/1‑143
                                                                                                                                                 TTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGGCACCGCTGTC  >  1:203238/1‑143
                                                                                                                                                 TTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACCACGCTGTC  >  2:442070/1‑143
                                                                                                                                                 TTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGTC  <  1:714898/143‑1
                                                                                                                                                 TTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGTC  >  1:725440/1‑143
                                                                                                                                                 TTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGTC  >  1:635963/1‑143
                                                                                                                                                 TTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGTC  >  1:579231/1‑143
                                                                                                                                                 TTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGTC  <  1:787846/143‑1
                                                                                                                                                 TTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGTC  >  1:541484/1‑143
                                                                                                                                                 TTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGTC  <  1:470595/143‑1
                                                                                                                                                 TTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGTC  <  2:291988/143‑1
                                                                                                                                                 TTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACCCTGTTTTGACCGGGTAACAGCCGCGAGGACAACGCGGTC  >  2:622130/1‑143
                                                                                                                                                 TTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGT                                                                                       <  1:104048/58‑1
                                                                                                                                                 TTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGGTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTGCATCCGTCAGGCGTGGGGCGCCGTAACGCGGGTTTGACCGGGTGAAAGCCGCGAGGACAACGCTGTa  >  1:331381/1‑142
                                                                                                                                                 TTTGCCCTCAGTCCCTGACGGCGCAGCCTTGCCGCTACGGCTTTTACGTTAACGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGTGTAAAAGCCGCGAGGACAACGCTGTa  >  2:843643/1‑142
                                                                                                                                                 TTTGCCCGCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGTC  <  1:906891/143‑1
                                                                                                                                                                                                                                                                                                
ACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGTGGCGGCAAGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/315707‑315852
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctTTGCCCTCAGTCCCTGACGGCGCAGGCTTGCCGCCACGGTTTTTACGTTAAAGGGGTAACCCTGAGCACGCAGTTCATCCGTCAGGCGTGGGGCACCGTAACGCTGTTTTGACCGGGTAAAAGCCGCGAGGACAACGCTGTC  <  NC_000913/315875‑315734

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.