New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 316093NA (NA)6 (0.110) 5/258 NT NA noncoding (865/1255 nt) IS3 repeat region
?NC_000913 = 316135 NA (NA)noncoding (907/1255 nt) IS3 repeat region

Only 100 of 121 total aligned reads displayed.

GGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/315949‑316093
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acgCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGGCGACATTGACCAGCCAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTG  <  NC_000913/316135‑315994
                                                                                                                                                                                                                                                                                               
ggatgcTTACGCCAGTGGCCCCAACCAGAAGTGGGCAGGAGACATCACGTACGTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGA                                                                                                                                                  <  1:416438/137‑1
GGATTTTTACGCCAGTGGCCCGAACCAGAAGTGTGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTGATTGACCTGTGGGCACGTGCGGTTATTGGCTGGTCAATGTCGGCACGGATGA                                                                                                                                                  >  1:615134/1‑143
GGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGTCATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCAGTGGTCACGTGCCGTTATTGGATGGTCACGGTCGCCCCGCCTGA                                                                                                                                                  >  2:1060342/1‑143
GGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCGGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGGCGCCACGCATGA                                                                                                                                                  >  1:19992/1‑143
GGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCCTGA                                                                                                                                                  >  2:943228/1‑143
GGATTGTTACGGCAGTGGCCCGAACCAGTATTTGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGA                                                                                                                                                  <  2:324348/143‑1
 tATTTTTACGCCAGTGGCCAGAAGAAGAAGGGGGCAGGAGGCATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGAC                                                                                                                                                 <  1:865704/142‑1
 GATTTTTACGCCAGTGGCCCGAACCAGCAGCGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTCGCCAGGCATGAC                                                                                                                                                 >  2:479994/1‑143
 GATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCCCGTGCTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGAC                                                                                                                                                 >  2:874783/1‑143
 GATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCCGTGGTCATTGACCTGTGGTCCCGTGCCGGTATTGGCGGGGCAATGTCGCCACGCATGAC                                                                                                                                                 >  2:453642/1‑143
 GATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCCGTGGTCATTGAACTGTGGCCACGTGCAGTTAGTGGCTGGCCAATGCCCACAGGCATGAC                                                                                                                                                 >  2:194666/1‑143
 GATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTTGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGCTCAATGTCGCAACGCATGAC                                                                                                                                                 >  1:849081/1‑143
 GATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGAC                                                                                                                                                 >  1:428175/1‑143
 GATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGAC                                                                                                                                                 >  2:1047575/1‑143
 GATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGAC                                                                                                                                                 >  1:589285/1‑143
 GATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGAC                                                                                                                                                 >  1:998342/1‑143
 GATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGAC                                                                                                                                                 >  2:146911/1‑143
 GATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGAC                                                                                                                                                 <  1:925398/143‑1
 GATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGAC                                                                                                                                                 >  1:124723/1‑143
 GATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGAC                                                                                                                                                 >  2:654830/1‑143
 GATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCCGGTCAATGTCGCCCCGCCTGAC                                                                                                                                                 >  2:7242/1‑143
 GATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGGTATTGGCTGGTCAATGTCGCCACGCGTGAC                                                                                                                                                 >  2:397633/1‑143
 GATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGACGATATTGGCTGGTCAATGGCGCCACGCATGAC                                                                                                                                                 >  1:588137/1‑143
 GATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACCTGCCGTTATCGGCTGGTCAATGTCGCCACGCATGAC                                                                                                                                                 >  1:178429/1‑143
 GATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGAAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCCATGTCGCCACGCATGAC                                                                                                                                                 >  1:464717/1‑143
 GATTTTTACGCCAGTGACCCGAACCAGAAGTGGGCAGGTGACCACACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTAACCGGTGGTCACGTGCCGTTATTGGCCGGTCAATGTCGCCAGGCATGAC                                                                                                                                                 >  2:814437/1‑143
  ttttgttCGCCAGTGGCCCGAACCAGAAGTGGTCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACG                                                                                                                                                <  2:1013983/136‑1
  tcTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGATATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACG                                                                                                                                                <  2:970778/141‑1
  agtggaACGGCAGGGGACCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACG                                                                                                                                                <  1:837662/137‑1
  agtcgggCGCCGGTCGCCCGAACCGGACGTGGGCAGGGGACCTCACGTACTTACGTACGGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACG                                                                                                                                                <  2:1031390/136‑1
  agTTTTACGCCGGGGGCCCGAACCAGAGGGGGGCAGGAGACAGCACGTACTTACGTACAGATGAAGGCTGGCTGTAGCTGGCAGTGGTCATTGACCTGTGGTCACGTGTCGTTATTGGCTGTTCAATGTCGCCACGCATGACG                                                                                                                                                <  2:131096/141‑1
  ATTTTTACGCCAGTGGCCCGAAGTAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCCGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACG                                                                                                                                                <  2:676503/143‑1
  ATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGTCTGTTTTTGTTTGGCAGTAGTCATTGACCTGTGGTCACGTGCCGTGATTGGCTGGTCAATGTCGCCACGCATGACG                                                                                                                                                <  1:961046/143‑1
  ATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTCGCCCCGCATGACG                                                                                                                                                >  1:509278/1‑143
  ATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCCTGACG                                                                                                                                                >  1:332471/1‑143
  ATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACG                                                                                                                                                <  1:91560/143‑1
  ATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACG                                                                                                                                                >  2:232373/1‑143
  ATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGCCAATGTCGCCACGCACGACG                                                                                                                                                >  1:515733/1‑143
  ATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCAGGTAAATGACGCAACGCATGACG                                                                                                                                                >  1:1074828/1‑143
  ATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGGCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACG                                                                                                                                                >  2:490892/1‑143
  ATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGATCATTGACCTGTGATGTCATTTCAGTATTGGATGTTCAATGTCGCCACGCATGACG                                                                                                                                                >  2:469075/1‑143
  ATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACCACCGTAAAGAGGGTGTTTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCGATGTCGCCACGCATGACG                                                                                                                                                >  1:1016747/1‑143
  ATTTTTACGCCAGGGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACG                                                                                                                                                <  1:750233/143‑1
  ATTTTCACGCCAGTGGCCCGAACCAGACGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACG                                                                                                                                                <  1:163882/143‑1
  ATTTTCACCCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACG                                                                                                                                                <  1:79453/143‑1
  ATTGTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACG                                                                                                                                                <  1:214119/143‑1
       TACGCAAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGGACTGACGTACAGATGGAGGATGGCTGTATCTGGCAGTGGTCCGTGACCCGTGGTCACGTGCCGTTGTGGGCTGGCCAATGTCGCCACGCATGACGCCGCa                                                                                                                                           >  2:65862/1‑142
          GCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCCATGTCGCCACGCATGACGCCGCAACc                                                                                                                                        >  1:245080/1‑142
                                       AGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCGGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCATCTGCAGGGCATCGCAGGCCAGTT                                                                                                          <  1:339378/143‑1
                                              agGTACTGCCGTACATATGAAGGCTGGCGGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCG                                                                                                    <  1:231819/141‑1
                                               CGTACTTACGTACAGAGCAAGGCGGGCTGTATCTGGCCGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGT                                                                                                   <  1:154067/143‑1
                                                                                                                                        ccccTGACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGGCGACATTGACCAGCCAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTA          <  1:313574/139‑1
                                                                                                                                         ctctgcCGCCGCCACAGCGCCAGCTGCCGGGCATCGCGGGCCAGTTGCGCCGTCATGCGGGGGGACATGGACCAGCCAATACAGGCACGTGACCACATGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAA         <  2:204257/137‑1
                                                                                                                                         cgcttgCGCCGCCCCGGCGCCGTCTGCAGGGCATCGCTGGCCAGTTGCGCCGTCATGCGTGGCGACATTGACCAGCCAAGAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAA         <  2:773649/137‑1
                                                                                                                                         cgcttgCGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGGCGACATTGACCAGCCAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAA         <  1:1007416/137‑1
                                                                                                                                         cgcttgCGCCGCCACAGCGCCAGCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGGCGACATTGACCAGCCAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAA         <  2:386663/137‑1
                                                                                                                                            tcgCGCCGCCACTGCGCCACCTGCTGGGCATCGCGGGCCAGTGGCGCCGGCATGCGTGGCGACATTGACCAGCCAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTA      <  2:387963/140‑1
                                                                                                                                            tccCGCCGCCACAGGGCGATCTGAAGCGCATCGAAGGCCCGTTGCCCCTTCATGCGTGGCGACATTGACCAGCCAATAACTGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTA      <  2:118043/140‑1
                                                                                                                                            tcACGCCGCCACGGCGCCATCGGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGGCGACATTGACCAGCCAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTA      <  2:239309/141‑1
                                                                                                                                            gGACGCCGCCACAGCGCCATCTACAGGGCATCGCGGGCCAGTTGCGCCGTCATGCGTGGCGACATTGACCAGCCAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTA      <  2:887227/142‑1
                                                                                                                                            TGACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGGCGACATTGACCAGCCAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTA      <  2:969558/143‑1
                                                                                                                                              gCGCCGCCACACCGGCCTCGGCAGGGCATCGCAGGCCGGTTGGGCCGTCAGGCGTGGCGACATTGACCAGCCAATAACGGCACGTGGCCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACG    <  2:1057085/142‑1
                                                                                                                                              cCGCCGCCACTGCGCCATCTGCAGGGCACCCCAGGCCAGCTGCGCCGTCATGCGTGCCGCCATTGACCAGCCAATACCGGCACGTCACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACG    <  1:39160/142‑1
                                                                                                                                              ACGCCGCCACGGGGCCCTCTCCAAGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGGCGACATTGACCAGCCAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACG    <  2:692461/143‑1
                                                                                                                                              ACGCCGCCACGGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGGCGACATTGACCAGCCAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACG    <  1:1028517/143‑1
                                                                                                                                              ACGCCGCCACCGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGGCGACATTGACCAGCCAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACG    <  2:337379/143‑1
                                                                                                                                              ACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCCGTTGCGCCGTCATGCGTGGCGACATTGACCAGCCAATAACGGCACGTGACCACAGGTCCATGACCACTGCCAGCTAGAGACAGCCTTCATCCGTACGAACGTACG    >  2:682263/1‑143
                                                                                                                                              ACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGGCGACATTGACCAGCCACTAACGGCACGTGACCACCGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTCCGTAAGTACG    >  2:965913/1‑143
                                                                                                                                              ACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGGCGACATTGACCAGCCAATAACGGCACGTGACGAAAGAGCAATGACCACTGCCAGACACAGCCAGCCTTCATCTGTACGCAAGTACG    >  2:171796/1‑143
                                                                                                                                              ACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGGCGACATTGACCAGCCAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATCCAGCCAGCCTCCATCTGTACGTcacgacg    >  1:645692/1‑136
                                                                                                                                              ACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGGCGACATTGACCAGCCAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACG    >  2:518078/1‑143
                                                                                                                                              ACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGGCGACATTGACCAGCCAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACG    >  1:1001711/1‑143
                                                                                                                                              ACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGGCGACATTGACCAGCCAATAACGGCACGTGACCACAGGTCAATGACCACTGCACGCTACATCCAGCCTTCATCTGTACGTAAGTACG    >  1:724333/1‑143
                                                                                                                                               CGCCGCCGCGGCGCCATCTGCTGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGGCGACATTGACCAGCCAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGT   <  2:82993/143‑1
                                                                                                                                               CGCCGCCCCAGGGCCCTCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGGCGACATTGACCAGCTAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGT   <  2:586862/143‑1
                                                                                                                                               CGCCGCCAGCGCGGCATCGGCAGGGCATCGGAGGCCAGTTGCGGCGTCATGCGTGGCGGCATTGACCAGCCAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGT   <  2:610596/143‑1
                                                                                                                                               CGCCGCCACGGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGGCGACATTGACCAGCCAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGT   <  2:576323/143‑1
                                                                                                                                               CGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGGCGACATTGACCAGCCAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGT   <  1:858920/143‑1
                                                                                                                                               CGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGGCGACATTGACCAGCCAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGT   <  1:205329/143‑1
                                                                                                                                               CGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGGCGACATTGACCAGCCAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGT   <  1:179029/143‑1
                                                                                                                                               CGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGGCGACATTGACCAGCCAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGT   <  2:944116/143‑1
                                                                                                                                               CGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGGCGACATTGACCAGCCAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGT   <  1:1007282/143‑1
                                                                                                                                               CGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGGCGACATTGACCAGCCAAT                                                                        >  1:998059/1‑74
                                                                                                                                               CGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCAGGCGTGGCGACATTGACCGGCCAATAACGGCCCGTGACTTTAGGTTAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGT   <  2:933746/143‑1
                                                                                                                                               CGCCGCCACAGCGCCATCTGCAAGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGGCGACATTGACCAGCCAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGT   <  1:143266/143‑1
                                                                                                                                               CGCCGCCACAGCGCCATCGGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGGCGACATTGACCAGCCAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGT   <  2:782504/143‑1
                                                                                                                                               CGCCGCCACAGCGCCATCCGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGGCGACATTGACCAGCCAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGT   <  1:971633/143‑1
                                                                                                                                                GCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCCGTTGCGCCGTCATACGTGGCGACATAAAACAGCAAATAACAACAAGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTG  >  1:117578/1‑143
                                                                                                                                                GCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGGCGACATTGAGCATCCAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATCCAGCCAGCCTTCACCTGTACGCACGGACGTG  >  2:991030/1‑143
                                                                                                                                                GCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGGCGACATTGACCGGCCAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTG  >  1:874603/1‑143
                                                                                                                                                GCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGGCGACATTGACCAGCCAATAACGGCACGTGACCACAGGTCAATGACCACTTCCAGGTACCGCCAGCCTTCATCTGTACGTAAGTACGTG  >  1:666638/1‑143
                                                                                                                                                GCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGGCGACATTGACCAGCCAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACTGCCAGCCTTCATCTGTACGCACGTACGTG  >  2:1059010/1‑143
                                                                                                                                                GCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGGCGACATTGACCAGCCAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTG  >  2:620784/1‑143
                                                                                                                                                GCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGGCGACATTGACCAGCCAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTG  >  1:474022/1‑143
                                                                                                                                                GCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGGCGACATTGACCAGCCAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTG  <  1:881662/143‑1
                                                                                                                                                GCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGGCGACATTGACCAGCCAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTG  >  1:284197/1‑143
                                                                                                                                                GCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGGCGACATTGACCAGCCAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTG  <  1:174841/143‑1
                                                                                                                                                GCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGGCGACATTGACCAGCCAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTG  >  1:119079/1‑143
                                                                                                                                                GCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGGCGACATTGACCAGCCAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCATCATCTGTACGTAAGTACGTG  >  1:941381/1‑143
                                                                                                                                                GCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGGCGACATGGACCAGCCAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTG  <  2:11966/143‑1
                                                                                                                                                                                                                                                                                               
GGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/315949‑316093
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acgCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGGCGACATTGACCAGCCAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAGCCAGCCTTCATCTGTACGTAAGTACGTG  <  NC_000913/316135‑315994

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.