New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 316201NA (NA)4 (0.080) 4/246 NT NA noncoding (973/1255 nt) IS3 repeat region
?NC_000913 = 316220 NA (NA)noncoding (992/1255 nt) IS3 repeat region

Only 100 of 251 total aligned reads displayed.

GTCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCAGATTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/316051‑316201
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagattatGCCGCTTCAGTTGCGCCTGATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGGCGA  <  NC_000913/316220‑316079
                                                                                                                                                                                                                                                                                                     
cgCACGGGCCCTGATTGGCTGGTCAATGTCGCCGCGCAGGACGGCGCGTCTGGCCCGCCATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAG                                                                                                                                                        <  2:884698/141‑1
GTCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGGTGGCGCTGTGGCGGCGTATGAGGCCCCGGGGCGTTATCGTTCTCACGGTCTGTGGAGGCCAGTACTATTCAG                                                                                                                                                        >  1:3209/1‑143
GTCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTACGCCGCCCCGGAACAATAACGCAAACACGGACCGTGGAGACCAGTACTGTTCAG                                                                                                                                                        >  1:717197/1‑143
GTCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTACGAGGCCCCGGCACGCCCTCGTGCGCACGGCCCGTCGAGGCCAGTACTGTTCAG                                                                                                                                                        >  1:829982/1‑143
GTCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAG                                                                                                                                                        >  1:415330/1‑143
GTCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAG                                                                                                                                                        <  1:134664/143‑1
GTCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAG                                                                                                                                                        <  1:840497/143‑1
GTCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGCGGAGGCCAGTACTGTTCAG                                                                                                                                                        >  1:542109/1‑143
GTCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCAAGGAGGCCAGTAATGTTCAG                                                                                                                                                        >  2:692984/1‑143
GTCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGGAAGAGGCCCCGGAACGGTATGGTTCACACGGACCGTGGAGGCCAGTACTGCTCAG                                                                                                                                                        >  2:347267/1‑143
GTCACGTGCCGTTATTGGCTGGTCAAGGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAG                                                                                                                                                        <  1:993089/143‑1
 TCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCTGATGGCGCTGTGCTGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGC                                                                                                                                                       >  1:493568/1‑143
 TCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGC                                                                                                                                                       >  1:583678/1‑143
 TCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGC                                                                                                                                                       >  1:27597/1‑143
 TCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGC                                                                                                                                                       >  1:435998/1‑143
 TCACGTGCCGTTATTGGCTGGTCAATGCCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGGACGTTATCGTTCAAACGGACCGTGGAGGCCAGTACTGTTCAGC                                                                                                                                                       >  2:564972/1‑143
  ggcgcGCCGTCACTGGCTGGTCCGTGGCGCCACGCATGACGTCGCGACCGGCCTGCGATGCCCTGCTGAGGGCGCTGCGGCGGCGTAAGAGGCCCCGGAACGTCATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCA                                                                                                                                                      <  2:910722/138‑1
  cgCGTGCCGTTATTGGCTGGTCACTGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGGTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCA                                                                                                                                                      <  1:56610/141‑1
  ccCGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACCGGCCTGCGATGCCATGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGGCCGTGGAGGCCAGTACTGTTCAGCA                                                                                                                                                      <  1:535473/141‑1
  CACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCCTGACGGCGCAACTGCCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCA                                                                                                                                                      <  1:704133/143‑1
  CACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCA                                                                                                                                                      <  1:609394/143‑1
  CACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCA                                                                                                                                                      <  1:756838/143‑1
  CACGTGCCGTGATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGCCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCGGCA                                                                                                                                                      <  1:324794/143‑1
  CACGTGCCGTGAGTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGGACGTGATCGTTCACACGGACCGTGTAGGCCAGTACTGTTCAGCA                                                                                                                                                      <  1:1071283/143‑1
  CACCTGCCGTGCTTGGCCGGTGCATGTCGCCCCGCAGGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCA                                                                                                                                                      <  2:1022770/143‑1
   ACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGTGGCCACGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCAG                                                                                                                                                     <  1:452290/143‑1
   ACGAGCCGTTAGTGGCTGGTCAATGGCGCCACGCATGACGGCGAAACGGGCGTGCGATGCCCTGCAGACGGCGAGGTGGCGGCGTAAGAGGCCCCGGAACGTTAGCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCAG                                                                                                                                                     <  1:401179/143‑1
    ctgGCCGCTCTTCGCTGGTCTATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCGGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCAGA                                                                                                                                                    <  2:56250/140‑1
    cgcGCCGTGATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGAGGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCAGA                                                                                                                                                    <  1:186402/140‑1
    ccTGCCGTTATTGGCTGGTCAATGTCGCCACGCAGGACGGCGCAACAGGCCTGCGATGCCCTGCAGAGGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCAGA                                                                                                                                                    <  1:668935/141‑1
    CGTGCCTGTATTGGCTGGTCAAGGCGGCCACGCAGGACGGCGCACCTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCAGA                                                                                                                                                    <  2:901619/143‑1
    CGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGGCCAACGGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCAGA                                                                                                                                                    <  1:89108/143‑1
    CGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCAGA                                                                                                                                                    >  2:832820/1‑143
    CGTGCCGTCATTGGGTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCAGA                                                                                                                                                    <  1:883699/143‑1
    CGTGCCGGTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCAGA                                                                                                                                                    <  1:600631/143‑1
     ggGCCGTTCTTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCAGAT                                                                                                                                                   <  1:106190/141‑1
     GTGCTGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCAGAT                                                                                                                                                   <  1:982229/143‑1
     GTGCGGTTAGTGGGTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCAGAT                                                                                                                                                   <  2:483399/143‑1
     GTGCCGTTCTTGCCTCGTCCATGTCGCCACGCATGACGGCGCAACCGGCCTGCGATGCCCTGCGGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCAGAT                                                                                                                                                   <  2:150116/143‑1
     GTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCAGAT                                                                                                                                                   >  1:929346/1‑143
     GTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCAGAT                                                                                                                                                   <  1:310572/143‑1
     GTGCCGGTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGGCTGCGATGCCCTGCAGATGGCGCGGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCAGAT                                                                                                                                                   <  2:364980/143‑1
      TGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGGAAGAGGCCCCGGAACGTTATCGTTCACACCGGCCGTGGAGGCCAGTACTGTCCAGCAGATT                                                                                                                                                  >  2:515372/1‑143
       GCCGTTCTGGGCTGGTCAATGTCGCCACGCATGACGGCGCAACGGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCAGATTA                                                                                                                                                 <  1:1039268/143‑1
       GCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGAACGTGGCGGCCAGTACCGTTGAGCAGATTg                                                                                                                                                 >  2:609482/1‑142
       GCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCCGTGGCGGCGCACGAGGCCCCGGAACGTTATCGCTCACACGGACCGTGGAGGCCAGCACTGTCCAGCAGATga                                                                                                                                                 >  2:396888/1‑141
       GCCGTTATTGGCGGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCAGATTA                                                                                                                                                 <  1:232373/143‑1
        ctgtgcgTGGCTGGTCAATGTCGCCCAGCATGACGGGGCAACTCGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCAGATTAT                                                                                                                                                <  2:238747/136‑1
        CCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTGTCGTTCACACGGACCGTGGAGGCCCGTACTGGTCAGCAGATTAT                                                                                                                                                >  1:177513/1‑143
        CCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCAGATTAT                                                                                                                                                <  1:222446/143‑1
        CCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCAGATTAT                                                                                                                                                >  1:964553/1‑143
        CCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGGTATCGTTCACACGGACCGTGGAGGCCAGTACGGTTCCGCAGATTAg                                                                                                                                                >  1:675060/1‑142
        CCGGTATTGGCTGGGCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGGTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCAGATTAc                                                                                                                                                <  1:796326/143‑2
         CGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGGGGCCAGTACTGTCCGGCAGAgcaac                                                                                                                                               >  2:264829/1‑138
         CGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTGCTCTTCAGCAGATTAca                                                                                                                                               >  2:687210/1‑141
         CGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGAAGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCAGATTctc                                                                                                                                               >  2:931104/1‑140
          GTTATTGGCTGGTCAATGTCGCCACGCATGAAGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGACCCGGAAAGTAATAGCTCACACGGACCGTGGATGTCAGTACTGATCAGCAGAATATaa                                                                                                                                              >  2:755167/1‑141
              TTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCAGATTAgcgggcg                                                                                                                                          >  1:504085/1‑136
                               CCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCA                                                                                                                                                      >  1:1003677/1‑114
                                    CATGACGGCGCAACTGGCCTGCGCTGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGACCCGCAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCGGATTATGCCGCTTCAGTTGCGCCTGATAATCTGC                                                                                                                    <  2:641765/143‑1
                                        ACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCAGATTATGCCGCTTCAGTTGCGCCTGATAATCTGCTGAA                                                                                                                <  1:819267/143‑1
                                                                                                                                            acaCAGATTATGCCGCTTCAGTTGCGCCTGATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGCCCAGTGGCGCCGccg            >  1:1008798/4‑140
                                                                                                                                              GCAGATTATGCCGCTTCAGTTGCGCCTGATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCCGTTGCGCCGTCATG          >  1:115895/1‑143
                                                                                                                                              GCAGATTATGCCGCTTCAGTTGCGCCTGATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATG          >  2:106445/1‑143
                                                                                                                                              GCAGATTATGCCGCTTCAGTTGCGCCTGATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATG          <  1:804770/143‑1
                                                                                                                                              GCAGATTATGCCGCTTCAGTTGCGCCTGATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAAAGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCAga          >  2:720836/1‑141
                                                                                                                                               CAGATTATGCCGCTTCAGTTTCGCCTGATAATCTGCTGAACAGTACTAGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGC         <  1:374938/143‑1
                                                                                                                                               CAGATTATGCCGCTTCAGTTGCGCCTGATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGC         <  1:642835/143‑1
                                                                                                                                               CAGATTATGCCGCTTCAGTTGCGCCTGATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTGCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGC         <  1:760284/143‑1
                                                                                                                                               CAGATTATGCCCCTTCAGTTGCGCCTGATATTCTTCTGATTTTTTTTGTCCTCCACGTTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGC         <  1:163572/143‑1
                                                                                                                                                 GATTATGCCGCTTCAGTTGCGCCTGATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGT       <  1:388261/143‑1
                                                                                                                                                 GATTATGCCGCTGAAGTTGCGCCTGATGATCCGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGT       <  2:187682/143‑1
                                                                                                                                                  agTATGCCGCTTCAGATGAGCCTGATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTG      <  1:344517/141‑1
                                                                                                                                                  ATTATGCCGCTTCAGTTGCGCCTGCTACTCTGCTGAACAGTACTGGGCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTG      <  2:783634/143‑1
                                                                                                                                                  ATTATGCCGCTTCAGTTGCGCCTGATACTCTGCTGAACATGACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGTGCCTCTTACGCCGCCACTGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTG      <  2:432062/143‑1
                                                                                                                                                  ATTATGCCGCTTCAGTTGCGCCTGATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTG      <  1:618923/143‑1
                                                                                                                                                   TTATGCCGCTTCAGTTGCGCCTGATAGGCTGCTGAACAGTACTGGCCTCCTCGGTCCGTGTCAACGATAACGTCCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGG     <  2:1031948/143‑1
                                                                                                                                                   TTATGCCGCTTCAGTTGCGCCTGATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGG     >  2:877632/1‑143
                                                                                                                                                   TTATGCCGCTTCAGTTGCGCCTGATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGG     <  1:939850/143‑1
                                                                                                                                                   TTATGCCGCTTCAGTTGCGCCTGATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGG     <  2:785204/143‑1
                                                                                                                                                   TTATGCCGCTTCAGTTGCGCCTGATAATCTGCGGAACAGTACTGGCCCCCACGGTGCGTGTGAACGATAACGTTCCGGGGCCTCTTCCGCCGCCACAGCGCCCCCTCCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGG     <  1:1034029/143‑1
                                                                                                                                                    ttTGCCGCTTCAGTGGCTCCTGCTAGTCGGCTGAGCAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCCGCGCCTCTTACGCCGCCACAGCGCCATCTGCATGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGGC    <  2:279147/141‑1
                                                                                                                                                    TATTCCGCTTCAGTTGCGTCTGATAATCTGCTGAACAGGACTGGCCGCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGGC    <  1:15513/143‑1
                                                                                                                                                    TATGGCGCGACAGTTGCGCCTGATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGGC    <  1:90672/143‑1
                                                                                                                                                    TATGCCGCTTCAGTTGCGCCTGATAGTCTGCTGACCAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGGC    <  2:860702/143‑1
                                                                                                                                                    TATGCCGCTTCAGTTGCGCCTGATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATCACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCCGTTGCGCCGTCATGCGTGGa    >  2:623171/1‑142
                                                                                                                                                    TATGCCGCTTCAGTTGCGCCTGATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGGC    <  1:78937/143‑1
                                                                                                                                                    TATGCCGCTTCAGTTGCGCCTGATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGGC    <  2:164889/143‑1
                                                                                                                                                    TATGCCGCTTCAGTTGCGCCTGATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGGC    <  1:204928/143‑1
                                                                                                                                                    TATGCCGCTTCAGTTGCGCCTGATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGGC    <  2:1074958/143‑1
                                                                                                                                                    TATGCCGCTTCAGTTGCGCCTGATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGGC    <  1:813112/143‑1
                                                                                                                                                    TATGCCGCTTCAGTTGCGCCTGATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGGC    >  2:404716/1‑143
                                                                                                                                                    TATGCCGCTTCAGTTGCGCCTGATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGGC    >  1:665172/1‑143
                                                                                                                                                    TATGCCGCTTCAGTTGCGCCTGAGAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCATCATGCGTGGC    <  2:599537/143‑1
                                                                                                                                                     ATGCCGCTTCAGTTGCGCCTGATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCCCAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGGCG   >  1:937151/1‑143
                                                                                                                                                     ATGCCGCTTCAGTTGCGCCTGATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGGCG   >  1:20295/1‑143
                                                                                                                                                     ATGCCGCTTCAGTTGCGCCTGATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGGCG   >  1:655218/1‑143
                                                                                                                                                      TGCCGCTTCAGTTGCGCCTGATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGGCGA  <  1:409944/143‑1
                                                                                                                                                      TGCCGCTTCAGTTGCGCCTGATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGGCGA  <  1:999293/143‑1
                                                                                                                                                      TGCCGCTTCAGTTGCGCCTGATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCAGCCACAGCGACATCTGCAGGGCATCGCAGGCCAGTCGCGCCGTCCTGCGTCGCGc  >  2:493922/1‑142
                                                                                                                                                                                                                                                                                                     
GTCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCAGATTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/316051‑316201
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagattatGCCGCTTCAGTTGCGCCTGATAATCTGCTGAACAGTACTGGCCTCCACGGTCCGTGTGAACGATAACGTTCCGGGGCCTCTTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGTTGCGCCGTCATGCGTGGCGA  <  NC_000913/316220‑316079

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.