| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,376,867 | T→C | 5.4% | V242V (GTA→GTG) | menH ← | 2‑succinyl‑6‑hydroxy‑2, 4‑cyclohexadiene‑1‑carboxylate synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,376,867 | 0 | T | C | 5.4% | 209.2 / 2.4 | 75 | V242V (GTA→GTG) | menH | 2‑succinyl‑6‑hydroxy‑2, 4‑cyclohexadiene‑1‑carboxylate synthase |
| Reads supporting (aligned to +/- strand): ref base T (42/26); new base C (2/2); total (44/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.40e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.86e-01 | |||||||||||
TGGATTTTTCATAACGAATGTCCTCGAAACCTTCGGAGCAGTCGTGCCATTCAACCGGTGCGTAAAGCATTGCTTCATCAGGATAAATCATATTGTGTCCTTTAGTCAGAAACGCAAGATCTGCGCCAGACTTGCGATTACGCCAGCGGGATTTTCCCGATGCGCGTTATGTCCGGCGCGAGGAATGACATGGCAGTCGGCAGCCAGTTCCGCCGCCAGGGCGCGGAATTTGCTGTCACGTTCACCACATAAATAATAAAACGCAAATGTGCGGGCGCTAA > NC_000913/2376729‑2377009 | tGGATTTTTCATAACGAATGTCCTCGAAACCTTCGGAGCAGTCGTGCCATTCAACCGGTGCGTAAAGCATTGCTTCATCAGGATAAATCATATTGTGTCCTTTAGTCAGAAACGCAAGATCTGCGCCAGACTTGCGATTACGc > 1:1046560/1‑143 (MQ=255)tGGATTTTTCATAACGAATGTCCTCGAAACCTTCGGAGCAGTCGTGCCATTCAACCGGTGCGTAAAGCATTGCTTCATCAGGATAAATCATATTGTGTCCTTTAGTCAGAAACGCAAGATCTGCGCCAGACTTGCGATTACGc > 1:160122/1‑143 (MQ=255) gATTTTTCATAACGAATGTCCTCGAAACCTTCGGAGCAGTCGTGCCATTCAACCGGTGCGTAAAGCATTGCTTCATCAGGATAAATCATATTGTGTCCTTTAGTCAGAAACGCAAGATCTGCGCCAGACGTGCGATTACGCCa > 1:199/1‑143 (MQ=255) ttttCATAACGAATGTTCTCGAAACCTTTGGAGCAGTGGTGCCATTTAACCGGTGCGTAAAGCATTGCTTCATTGGGATAAATCATATTGTGTCCTTTAGTCAGACACGCAAAATCTGCGCAAGACTTGTGATTACGCAAGCg > 2:932080/1‑143 (MQ=255) ttttCATAACGAATGTCCTCGAAACCTTCGGAGCAGTCGTGCCATTCAACCGGTGCGTAAAGCATTGCTTCATCAGGATAAATCATATTGTGTCCTTTAGTCAGAAACGCAAGATCTGCGCCAGACTTGCGATTACGCCAGCg > 2:716874/1‑143 (MQ=255) cATAACGAATGTCCTCGAAACCTTCGGAGCAGTCGTGCCATTCAACCGGTGCGTAAAGCATTGCTTCATCAGGATAAATCATATTGTGTCCTTTAGTCAGAAACGCAAGATCTGCGCCAGACTTGCGATTACGCCAGCGGGAt > 2:49670/1‑143 (MQ=255) tAACGAATGTCCTCGAAACCTTCGGAGCAGTCGTGCCATTCAACCGGTGCGTAAAGCATTGCTTCATCAGGATAAATCATATTGTGTCCTTTAGTCAGAAACGCAAGATCTGCGCCAGACTTGCGATTACGCCAGCGGGAttt > 1:943451/1‑143 (MQ=255) aCGAATGTCCTCGAAACCTTCGGAGCAGTCGTGCCATTCAACCGGTGCGTAAAGCATTGCTTCATCAGGATAAATCATATTGTGTCCTTTAGTCAGAAACGCAAGATCTGCGCCAGACTTGCGATTCCGCCAGAGGGATTTTc > 1:138930/1‑143 (MQ=255) cGAATGTCCTCGAAACCTTCGGAGCAGTCGTGCCATTCAACCGGTGCGTAAAGCATTGCTTCATCAGGATAAATCATATTGTGTCCTTTAGTCAGAAACGCAAGATCTGCGCCAGACTTGCGATTACGCCAGCGGGATTTTcc < 1:794114/143‑1 (MQ=255) tGTCCTCGATACCTTCGTAGCAGTCGTGCCATTCAACCGGTGCGTAAAGCATTGCTTCATCAGGATAAATCATATTGTGTCCTTTAGTCAGAAACGCAAGATCTGCGCCAGACTTGCGATTACGCCAGCGGGATTTTCCCGAt < 2:548221/143‑1 (MQ=255) tGTCCTCGAAACCTTCGGCGCTTTCTTGCCATTCAACCAGTGCGTAAAGCATTGCTTCATCAGGATAAATCATATTGTGTCCTTTAGTCAGAAACGCAAGATCTGCGCCAGACTTGCGATTACGCCAGCGGGATTTTCCCGAt < 2:258229/143‑1 (MQ=255) tCGAAACCTTCGGAGCAGTCGTGCCATTCAACCGGTGCGTAAAGCATTGCTTCATCAGGATAAATCATATTGTGTCCTTTAGTCAGAAACGCAAGATCTGCGCCAGACTTGCGATTACGCCAGCGGGATTTTCCCGATGcgcg > 1:362900/1‑143 (MQ=255) aaaCCCTCGGAGCAGTCGTGCCATTCAACCGGTGCGTAAAGCATTGCTTCATCAGGATAAATCATATTGTGTCCTTTAGTCAGAAACGCAAGATCTGCGCCAGACTTGCGATTACGCCAGCGGGATTTTCCCGATGCGCGTTa < 1:407933/143‑1 (MQ=255) cTTCGGAGCAGTCGTGCCATTCAACCGGTGCGTAAAGCATTGCTTCATCAGGATAAATCATCTTGTGTCCTTTAGTCAGAAACGCAAGATCTGCGCCAGACTTGCGATTCCGCCAGCGGGATCTTCCCGATGCGCGTTATGTc > 2:134725/1‑143 (MQ=255) gAGCAGTCGTGCCATTCAACCGGTGCGTAAAGCATTGCTTCATCAGGATAAATCATATTGTGTCCTTTAGTCAGAAACGCAAGATCTGCGCCAGACTTGCGATTACGCCAGCGGGATTTTCCCGATGCGCGTTATGTCCGgcg < 1:231073/143‑1 (MQ=255) cAGTCGTGCCATTCAACCGGTGCGTAAAGCATTGCTTCATCAGGATAAATCATATTGTGTCCTTTAGTCAGAAACGCAAGATCTGCGCCAGACTTGCGATTACGCCAGCGGGATTTTCCCGATGCGCGTTATGTCCGGCGCGa < 1:318556/143‑1 (MQ=255) cAGGCGTGCCATTCAACCGGTGCGTAAAGCATTGCTTCATCAGGATAAGTCATATTGTGTCCTTTAGTCAGAAACGCAAGATCTGCGCCAGACTTGCGATTACGCCAGCGGGATTTTCCCGATGCGCGTTATGTCCGGCGCGa < 2:761724/143‑1 (MQ=255) cGTGCCATTCAACCGGTGCGTAAAGCATTGCTTCATCAGGATAAATCATATTGTGTCCTTTAGTCAGAAACGCAAGATCTGCGCCAGACTTGCGATTACGCCAGCGGGATTTTCCCGATGCGCGTTATGTCCGGCGCGAGGaa < 1:636429/143‑1 (MQ=255) gCCATTCAACCGGGGCGTAAAGCATTGCTTCATCAGGATAAATCATATTGTGTCCTTTAGTCAGAAACGCAAGATCTGCGCCAGACTTGCGATTACGCCAGCGGGATTTTCCCGATGCGCGTTATGTCCGGCGCGAGGAATGa < 2:315665/143‑1 (MQ=255) aTTCAACCGGTGCGTAAAGCATTGCTTCATCAGGATAAATCATATTGTGTCCTTTAGTCAGAAACGCAAGATCTGCGCCAGACTTGCGATTACGCCAGCGGGATTTTCCCGATGCGCGTTATGTCCGGCGCGAGGAATGGCAt > 2:97686/1‑143 (MQ=255) ttCAACCGGTGCGTAAAGCATTGCTTCATCAGGATAAATCATATTGTGTCCTTTAGTCAGAAACGCAAGATCTGCGCCAGACTTGCGATTACGCCAGCGGGATTTTCCCGATGCGCGTTATGTCCGGCGCGAGGCATGACAtc > 2:290592/1‑142 (MQ=255) ttCAACCAGTGCGTAAAGCATTGCTTCATCAGGATAAATCATATTGTGTCCTTTAGTCAGAAACGCAAGATCTGCGACAGACTTGCGATTACGCCAGCGGGATTTTCCCGATGCGCGCTATGTCCGGCGCGAGGAATGACATg > 2:209507/1‑143 (MQ=255) gtCAACCGGTGCGTAGAGGAGTGCTTCATCAGGATACATCATATTGTGTCCGTTAGTCGGAAACGCAAGATCTGCGCCAGACTTGCGGTTACGCGAGCGGGATTTTCCCGATGCGCGTCATGTCCGGCGCGAGGAATGACATg < 2:1059225/142‑1 (MQ=255) tCAACCGGTGCGTAAAGCATTGCTTCATCAGGATAAATCATATTGTGTCCTTTAGTCAGAAACGCAAGATCTGCGCCAGACTTGCGATTACGCCAGCGGGATTTTCCCGATGCGCGTTATGTCCGGCGCGAGGAATGACATgg < 2:379084/143‑1 (MQ=255) tCAACCGGTGCGTAAAGCAGTGCTTCATCAGGATAAATCATATTGTGTCCTTTAGTCAGAAACGCAAGATCTGCGCCAGACTTGCGATTACGCCAGCGGGATTTTCCCGATGCGCGTTATGTCCGGCGCGAGGAATGACATgg < 1:329704/143‑1 (MQ=255) aaCCGGTGCGTAAAGCATTGCTTCATCAGGATAAATCATATTGTGTCCTTTAGTCAGAAACGCAAGAACTGCGCCAGACTTGCGATTAGGCCAGCGGGATCTTCCCGATGCGCGGTATGTCCTCCCCGAGGAAGGACCTGGcg > 2:798772/1‑142 (MQ=255) gccgTGCGTAAAGCAGTGCTTCATCAGGACAAACCATATTGTGTCCTTTAGTCACCAACGCAAGATCTGCGCCAGACTTGCGATTACGCCAGCGGGATTTTCCCGCTGCGCGTTATGTCCGGCGCGAGGAATGACATGGCAGt < 1:321966/140‑1 (MQ=255) ggcgCGTAAAGCATTGCTTCTGCACGTTACATCTTGTGGTCTCCTTTGGTCTGTAACGTAAGTTCTGCGCCAGGCTGGCGATTACTCCAGCGTGATTTTCCCGATGCGCGTTATGTCCGGCGCGAGGAATGACATGGCAGTCg < 2:8215/140‑1 (MQ=255) gcgcAAAGCATTGCTTCATCAGGATAAATCATATTGTGTCCTTTAGTCAGAAACGCAAGATCTGCGCCAGACTTGCGATTACGCCAGCGGGATTTTCCCGATGCGCGTTATGTCCGGCGCGAGGAATGACATGGCAGTCGGCa < 2:364536/143‑1 (MQ=255) cGTAAAGCATTGCTTCATCAGGATAAATCATATTGTGTCCTTTAGTCAGAAACGCAAGATCTGCGCCAGACTTGCGATTACGCCAGCGGGATTTTCCCGATGCGCGTTATGTCCGGCGCGAGGAATGACATGGCAGTCGGccg > 2:140552/1‑141 (MQ=255) tAAAGCATTGCTTCATCAGGATAAATCATATTGTGTCCTTTAGTCAGAAACGCAAGATCTGCGCCAGACTTGCGATTACGCCAGCGGGATTTTCCCGATGCGCGTTATGTCCGGCGCGAGGAATGACATGGCAGTCGGCAGcc > 2:495280/1‑143 (MQ=255) tAAAGCATTGCTTCATCAGGATAAATCATATTGTGTCCTTTAGTCAGAAACGCAAGATCTGCGCCAGACTTGCGATTACGCCAGCGGGATTTTCCCGATGCGCGTTATGTCCGGCGCGAGGAATGACATGGCAGTCGGCAGcc > 1:929112/1‑143 (MQ=255) aacgCATGGCTTCATCAGGAGAAATCATATTGTGTCCTTTAGTCAGAAACGCAAGATCTGCGCCAGACTTGCGATTACGCCAGCCGGATTTTCCCGATGCGCGTTATGTCCGGCGCGAGGAATGACATGGCAGTCGGCAGCCa < 1:463421/140‑1 (MQ=255) gCATTGCTTCATCAGGATAAATCATATTGTGTCCTTTAGTCAGAAACGCAAGATCTGCGCCAGCCTTGCGATTACGCCAGCGGGATTTTCCCGATGCGCGTTATGTCCGGCGCGAGGAATGACATGGCAGTCGGCAGCCAGtc > 1:755603/1‑142 (MQ=255) gCATTGCTTCATCAGGATAAATCATATTGTGTCCTTTAGTCAGAAACGCAAGATCTGCGCCAGACTTGCGATTACGCCAGCGGGATTTTCCCGATGCGCGTTATGTCCGGCGCGAGGAATGACATGGCAGTCGGCAGCCAGtt < 2:794654/143‑1 (MQ=255) tGCTCCATCACGATAAACCATATTGTGTCCTGTAGCCGGAAACGCAACATCCGCGCCAGCCTTGCGAGTACGCCAGCGGGACTTTCCCGATGCGCGTTATGTCCGGCGCGAGGAATGACGTGGCAGTCGGCAGCCAGTTccgc < 2:582006/143‑1 (MQ=255) cTTCATCAGGATAAATCATATTGTGTCCTTTAGTCAGAAACGCAAGATCTGCGCCAGACTTGCGATTACGCCAGCGGGATTTTCCCGATGCGCGTTATGTCCGGCGCGAGGAATGACATGGCAGTCGGCAGCCAGTTccgccg > 1:135079/1‑143 (MQ=255) ttCATCAGGATAAATCATATTGTGTCCTTTAGTCAGAAACGCAAGATCTGCGCCAGACTTGCGATTACGCCAGCGGGATTTTCCCGATGCGCGTTATGTCCGGCGCGAGGAATGACATGGCAGTCGGCAGCCAGTTCcgccgc > 2:227143/1‑143 (MQ=255) atcaGGATAAATCATATTGTGTCCTTTAGTCAGAAACGCAAGATCTGCGCCAGACTTGCGATTACGCCAGCGGGATTTTCCCGATGCGCGTTATGTCCGGCGCGAGGAATGACATGGCAGTCGGCAGCCAGTTCCGCCGCCAg > 2:323774/1‑143 (MQ=255) aGGATAAATCATATTGTGTCCTTTAGTCAGAAACGCAAGATCTGCGCCAGACTTGCGATTACGCCAGCGGGATTTTCCCGATGCGCGTTATGTCCGGCGCGAGGAATGACATGGCAGTCGGCAGCCAGTTCCGCCGCCAGGgc > 1:347431/1‑143 (MQ=255) aGGATAAATCATATTGTGTCCTTTAGTCAGAAACGCAAGATCTGCGCCAGACTTGCGATCACGCCAGCGGGATTTTCCCGATGCGCGTTATGTCCGGCGCGAGGa < 2:192458/105‑1 (MQ=255) aGGATAAATCATATTGTGTCCTTTAGTCAGAAACGCAAGATCTGCGCCAGACTTGCGATCACGCCAGCGGGATTTTCCCGATGCGCGTTATGTCCGGCGCGAGGa < 2:718790/105‑1 (MQ=255) aGGATAAATCATATTGTGTCCTTTAGTCAGAAACGCAAGATCTGCGCCAGACTTGCGATCACGCCAGCGGGATTTTCCCGATGCGCGTTATGTCCGGCGCGAGGa > 1:192458/1‑105 (MQ=255) aGGATAAATCATATTGTGTCCTTTAGTCAGAAACGCAAGATCTGCGCCAGACTTGCGATCACGCCAGCGGGATTTTCCCGATGCGCGTTATGTCCGGCGCGAGGa > 1:718790/1‑105 (MQ=255) gATATATCATATTGTGTCCTTTAGTCAGAAACGCAAGATCTGAGTCAGACTTGCGATTACGCCAGCGGGATTTTCCCGATGCGCGTTATGTCTGGCGCGAGGATTGACATGGCAGTCGGCAGCCAGTTCCGCCGCCAGGgcgc < 2:409761/143‑1 (MQ=255) aTAAATCATATTGTGTCCTTTAGTCAGAAACGCAAGATCTGCGCCAGACTTGCGATTACGCCAGCGGGATTTTCCCGATGCGCGTTATGTCCGGCGCGAGGAATGACATGGCAGTCGGCAGCCAGTTCCGCCGCCAGAGcgcg > 1:1031774/1‑143 (MQ=255) tCATATTGTGTCCTTTAGTCAGAAACGCAAGATCTGCGCCAGACTTGCGATTACGCCAGCGGGATTTTCCCGATGCGCGTTATGTCCGGCGCGAGGAATGACATGGCAGTCGGCAGCCAGTTCCGCCGCCAGGGCGCGGAAtt > 1:143334/1‑143 (MQ=255) tCATATTGTGTCCTTTAGTCAGAAACGCAAGATCTGCGACAGACTTGCGATTACCCCAGCGGGATTTTCCCGCCGCGCGTTATGTCCGGCGCGAGGAATGACATGGCAGGCGGCGGCCAGTTCCGCCGCCCGGGCGCGGAAtg > 2:586000/1‑142 (MQ=255) tatTGTGTCCTTTAGTCAGAAACGCAAGATCTGCGCCAGACTTGCGATTACGCCAGCGGGATTTTCCCGATGCGCGTTATGTCCGGCGCGAGGAATGACCTGGCAGTCGGCAGCCAGTTCCGCCGCCAGGGCGCGGAGTTTGc > 1:612147/1‑143 (MQ=255) gtgtCCTTTAGTCAGAAACGCAAGATCTGCGCCAGACTTGCGATTACACCAGCGGGATTTTACCGATGCGCGTTATGTCCGGCGCGAGGAATGACATGGCAGACGGCAGCCAGTTCCGCCGCCAGAGCGCGGACTTTGCTGTc > 1:216422/1‑143 (MQ=255) tgtCCTTTAGTCAAAAAAGCAAGATCTGCGCCAGACTTGCGATTACGCCAGCGGGATTTTCCCGATGCGCGTTATGTCCGGCGCGAGGAAGGACATGGCAGTCGGCAGCCAGTTCCGACGCCAGGGCGCCGAATTTGCTGtac > 2:652828/1‑141 (MQ=255) cTTTGGTCAGAGACGCAAGTTCTGCGCCAGACTTGCGCTTACGCCAGCGGGATTTTCCCGGTGCGCGTTATGTCCGGCGCGAGGAATGACATGGCAGTCGGCAGCCAGTTCCGCCGCCAGGGCGCGGAATTTGCTGTCACGtt < 2:940217/143‑1 (MQ=255) cTTTAGTCAGAAACGCAAGATCTGCGCCAGACTTGCGATTACGCCAGCGGGATTTTCCCGATGCGCGTTATGTCCGGCGCGAGGaa < 2:816394/86‑1 (MQ=255) cTTTAGTCAGAAACGCAAGATCTGCGCCAGACTTGCGATTACGCCAGCGGGATTTTCCCGATGCGCGTTATGTCCGGCGCGAGGaa > 1:816394/1‑86 (MQ=255) tttAGTCAGAAACGCAAGATCTGCGCCAGACTTGCGATTACGCCAGCGGGATTTTCCCGATGCGCGTTATGTCCGGCGCGAGGAATGACATGGCAGTCGGCAGCCAGTTCCGCCGCCAGGGCGCGGACTTTGCTGTGACGTTc > 2:1002301/1‑143 (MQ=255) tttAGTCAGAAACGCAAGATCTGCGCCAGACTTGCGATTACGCCAGCGGGATTTTCCCGATGCGCGTTATGTCCGGCGCGAGGAATGACATGGCAGTCGGCAGCCAGTTCCGCCGCCAGGGCGCGGACTTTGCTGTCACGTTc > 2:472284/1‑143 (MQ=255) tttAGTCAGAAACGCAAGATCTGCGCCAGACTTGCGATTACGCCAGCGGGATTTTCCCGATGCGCGTTATGTCCGGCGCGAGGAATGACATGGCAGTCGGCAGCCAGTTCCGCCGCCAGGGCGCGGAATTTGCTGTCACGTTc > 1:1007676/1‑143 (MQ=255) tttAGTCAGAAACGCAAGATCTGCGCCAGACTTGCGATTACGCCAGCGGGATTTTCCCGATGCGCGTTATGTCCGGCGCGAGGAATGACATGGCAGTCGGCAGCCAGCTCCGCCGCCAGGACGCAGAATTGGCTGTCACCTTc > 2:694947/1‑143 (MQ=255) tttAGTCAGAAACGCAAGATCTGCGCCAGACTTGCGATTACGCCAGCGGGATTTTCCCGATGAGCGTTATGTCCGGCGCGAGGAATGACATGGCAGTCGGCAGCCAGTTCCGCCGCCAGGGCGCGGCATTCGCTGTCACGGTc > 2:655568/1‑143 (MQ=255) tCAGAAACGCAAGATCTGCGCCAGACTTGCGATTACGCCAGCGGGATTTTCCCGATGCGCGTTATGTCCGGCGCGAGGAATGACATGGCAGTCGGCAGCCAGTTCCGCCGCCAGGGCGCGGAACTTGCTGTCACGTTcagccc > 1:826419/1‑139 (MQ=255) cAGAAACGCAAGATCTGCGCCAGACTTGCGATTACGCCAGCGGGATTTTCCCGATGCGCGTTATGTCCGGCGCGAGGAATGACATGGCAGTCGGCAGCCAGTTCCGCCGCCAGGGCGCGGAATTTGCTGTCACGTTCACcaca > 2:81788/1‑143 (MQ=255) aGAAACGCAAGATCTGCGCCAGAGTTGCGATGACGCCAGCGGGATTTTCCCGATGCGCGTTATGTCCGGCGCGAGGAATGACATGGCAGTCGGCAGCCAGTTCCGCCGCCAGGGCGCGGAATTTGCTGTCACGTTCACCACat < 1:603550/143‑1 (MQ=255) aGAAACGCAAGATCTGCGCCAGACTTGCGATTACGCCAGCGGGATTTTCCCGATGCGCGTTATGTCCGGCGCGAGGAATGACATGGCAGTCGGCAGCCAGTTCCGCCGCCAGGGCGCGGAATTTGCTGTCACGTTGACCACat > 1:533854/1‑143 (MQ=255) aGAAACGCAAGATCTGCGCCAGACTTGCGATTACGCAAGCGGAATTTTCCCGATGCGCGTGATGTCCGGCGCGAGAAATGACATGGCAGTCGGCAGCCAGTTCCGCCGCCAGTGCGCGGAATTTGCTGTCCCGGTCGCcacag > 2:202361/1‑142 (MQ=255) cAAGATCTGCGCCAGACTTGCGATTACGCCAGCGGGATTTTCCCGATGCGCGTTATGTCCGGCGCGAGGAATGACATGGCAGTCGGCAGCCAGTTCCGCCGCCAGGGCGCGGAATTTGCTGTCACGTTCACCACATAaataat > 1:644951/1‑143 (MQ=255) cAAGATCTGCGCCAGACTTGCGATTACGCCAGCGGGATTTTCCCGATGCGCGTTATGTCCGGCGCGAGGAATGACATGGCAGTCGGCAGCCAGTTCCGCCGCCAGGGCGCGGAATTTGCTGTCACGTTCACCACATAaataat < 1:528876/143‑1 (MQ=255) aGATCTGCGCCAGACTTGCGATTACGCCAGCGGGATTTTCCCGATGCGCGTTATGTCCGGCGCGAGGAATGACATGGCAGTCGGCAGCCAGTTCCGCCGCCAGGGCGCGGAATTTGCTGTCACGTTCACCACATAAAtaataa > 2:122440/1‑143 (MQ=255) aTCTGCGCGAGACTTGCGATGACGCCAGCTGCATTTTCCCGATGCGCGTTCTCTCCGGCGCGAGGAATGACATGGCGGTCGGCAGCCAGTTCCGCCGCCAGGGCGCGGAATTTGCTGTCACGTTCACCACATAAATAATaaaa < 2:821219/143‑1 (MQ=255) aTCTGCGCCAGGCTTGCGATTACGCCAGCGGGATTTTCCCGATGCGCGTTATGTCCGGCGCGAGGAATGACATGGCAGTCGGCAGCCAGTTCCGCCGCCAGGGCGCGGAATTTGCTGTCACGTTCACCACATAAATAATaaaa < 1:181406/143‑1 (MQ=255) aTCTGCGCCAGACTTGCGATTACGCCCGGGGGATCTGTGGAGCGCTCGTTATGTCCGGCGCGGGGACGCATATGGCAGTCGTCAGCCAGGGCCGGCCCTAGGGCGCTGACATTTCTCTCTCCTGCACCACATAAATAATgaaa > 2:646770/1‑143 (MQ=255) aTCTGCGCCAGACTCGCGATTACGCCAGCGGGATTTTCCCGATGCGCGTTATGTCCGGCGCGAGGAATGACATGGCAGTCGGCAGCCAGTTCCGCCGCCAGGGCGCGGAATTTGCTGTCACGTTCACCACATAAATAATaaaa < 1:391053/143‑1 (MQ=255) tCTGCGCCAGACTTGCGAGTACGCCAGCGGGATTTTCCCGATGCGCGTTATGTCCGGCGCGAGGAATGACATGGCAGTCGGCAGCCAGTTCCGCCGCCAGGGCGCGGAATTTGCTGTCACGTTCACCACATAAATAATAAAAc < 2:351497/143‑1 (MQ=255) aGACTTGCGATTACGCCAGCGGGATTTTCCCGATGCGCGTTATGTCCGGCGCGAGGAATGACATGGCAGTCGGCAGCCAGTTCCGCCGCCAGGGCGCGGAATTTGCTGTCACGTTCACCACATAAATAATAAAACGCAAAtgt < 1:819067/143‑1 (MQ=255) gcTTGCGATGACGCCAGCGGGATTTTCCCGATGCGCGTTATGGCCGGCGCCAGGAATGACATGGCAGTCGGCAGCCAGTTCCGCCGCCAGGGCGCGGAATTTGCTGTCACGTTCACCACATAAATAATAAAACGCAAATGTGc < 2:785223/142‑1 (MQ=255) aCTTGCGATTACGCCAGCGGGATTTTCCCGATGCGCGTTATGTCCGGCGCGAGGAATGACATGGCAGTCGGCAGCCAGTTCCGCCGCCAGGACGCGGAATTTGCTGTCACGTTCACCACATAAATAATAAAAGGCAGAtgtcc > 2:615558/1‑141 (MQ=255) tACGCCAGCGGGATTTTCCCGATGCGCGTTATGTCCGGCGCGAGGAATGACATGGCAGTCGGCAGCCAGTTCCGCCGCCAGGGCGCGGAATTTGCTGTCACGTTCACCACATAAATAATAAAACGCAAATGTGCGGGCGCTaa > 1:721331/1‑143 (MQ=255) | TGGATTTTTCATAACGAATGTCCTCGAAACCTTCGGAGCAGTCGTGCCATTCAACCGGTGCGTAAAGCATTGCTTCATCAGGATAAATCATATTGTGTCCTTTAGTCAGAAACGCAAGATCTGCGCCAGACTTGCGATTACGCCAGCGGGATTTTCCCGATGCGCGTTATGTCCGGCGCGAGGAATGACATGGCAGTCGGCAGCCAGTTCCGCCGCCAGGGCGCGGAATTTGCTGTCACGTTCACCACATAAATAATAAAACGCAAATGTGCGGGCGCTAA > NC_000913/2376729‑2377009 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |