| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,877,558 | G→C | 5.1% | intergenic (‑93/+147) | yidB ← / ← gyrB | conserved protein YidB/DNA gyrase subunit B |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,877,558 | 0 | G | C | 5.1% | 231.4 / 5.2 | 79 | intergenic (‑93/+147) | yidB/gyrB | conserved protein YidB/DNA gyrase subunit B |
| Reads supporting (aligned to +/- strand): ref base G (36/39); new base C (2/2); total (38/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.15e-01 | |||||||||||
CATCGCCTTTCAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTAAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGC > NC_000913/3877420‑3877700 | cATCGCCTTTCAGAAAGGCACCGACAACTTCGTCAAAAAGCCCCATGATAATCACCTGTAAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATCAtct < 1:977289/143‑1 (MQ=255) aTCGCCTTTCAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTAAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGAtctc > 2:836079/1‑143 (MQ=255) aTCGCCTTTCAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTAAAGCGTTACGTGTTGACCCAAAAAGTATAGATTAGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGAtctc > 2:272308/1‑143 (MQ=255) tttCAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTAAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCt > 1:613153/1‑143 (MQ=255) tttCAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTAAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCt > 2:505350/1‑143 (MQ=255) tttCAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTAAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGAGCTCCGCCCt > 1:312131/1‑143 (MQ=255) cAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTAAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCtttt > 1:407456/1‑143 (MQ=255) cAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTAAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATCATCTCCGCCCtttt < 1:563775/143‑1 (MQ=255) aGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTAAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTc > 2:785131/1‑143 (MQ=255) aaGGCACCGACAACTGCATCAAAAAGCCCCATGATAATCACCTGTAAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTta < 1:435613/143‑1 (MQ=255) tgCACCGACAACTTCATCAAAAAGCCCCATGAGAATCGCCTGTAAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTtata < 2:644550/142‑1 (MQ=255) cacgggcAACTTCATCAACAAGCCCCATGATAATCACCTGTAAAGCGTTACGTGTTGAGCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGc < 1:689403/137‑1 (MQ=255) cACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTAAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGc < 1:609067/143‑1 (MQ=255) cACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTAAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGc < 1:827450/143‑1 (MQ=255) aCCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTAAAGCGGTACGTGTTGACCCAACAAGTATAGATTTGCGGGATGATAATTGCGGATGGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTCTTCTTATAGct > 2:179921/1‑143 (MQ=255) aaCTTCATCAAAAAGCCCCATGATAATCACCTGTAAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGc > 2:631160/1‑143 (MQ=255) aCTTTATCAAAAAGGCGCAGGAGAAGCACCGGGAAGGCGGTAGGTGTTGACCCAAAAAGTATAGAGTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGcc < 1:15882/143‑1 (MQ=255) aCTTCATCAAAAAGCCCCATGATAATCACCTGTAAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGcc < 2:440266/143‑1 (MQ=255) cTTCATCAAAAAGCCCCATGATAATCAGTTGTAAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCg < 2:521292/143‑1 (MQ=255) ttCATCAAAAAGCCCCATGATAATCACCTGTAAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCgg > 2:579746/1‑143 (MQ=255) agaaatgcccATGATAAGCACCTGTACAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATgcgg < 2:384072/136‑1 (MQ=255) aaaaaGCCCCATGATAATCACCTGTAAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATCGCTTCTTGCCGGATgcgg > 1:62842/1‑143 (MQ=255) cggCCCCATGATAGTCACCTGTACAGCCTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGACTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGt < 2:337608/141‑1 (MQ=255) ccccTGTTAATCACCTGTAAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAAc < 2:554933/143‑1 (MQ=255) ccATGATAATCACCTGTAAAGCGTTACGAGTTGTCCCAAAAAATATAGATTTGAGGGATGATAATTGCGGATTGCACAAATAAAAAGCGCGCAGAAGATCTCCGCCCTCTGCTTATAGCATCCTGCCGGATGAGGCGTGAACg > 2:523698/1‑143 (MQ=255) caaTGATAAGCACCTGTAAAGAGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACg < 1:254853/141‑1 (MQ=255) cATTATAATCACCTGTAAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGc < 1:502537/143‑1 (MQ=255) aTGATAATCACCTGTAAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCATTTTGTTATAGCTTCTTGCCGGATGCGGCGTGAGCggc > 1:259241/1‑141 (MQ=255) tGATAATCACCTGTAAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGTCGGATGCGGCGTGAACGCCt > 2:116160/1‑143 (MQ=255) aTAATCACCTGTAAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTTCTGTATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTa < 1:758787/143‑1 (MQ=255) aaTCACCTGTAAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATc < 1:137011/143‑1 (MQ=255) aCCTGTAATGCGTTAGGTGTTGACCCCAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGc < 1:276720/143‑1 (MQ=255) aCCTGTAAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGc > 2:775523/1‑143 (MQ=255) aCCTGTAAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGAGGCGGCGTGGACGCCTTATCCgac > 2:841206/1‑141 (MQ=255) ccTGTAAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATAAGGCGTTCACGCCGCATCCGGca < 2:407456/143‑2 (MQ=255) cTGTGAGGCGTTACGTGTTGACCCAAGAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCt < 2:248032/143‑1 (MQ=255) tGTAAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGCTCTCCGCCCTTTTCTTATAGCTAATTGCCGGATGCAGGGTGAACGCCTTATCAGGCCTa > 1:209680/1‑143 (MQ=255) gTAAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGCTTGCAGAAATAAAAATGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTAc > 1:153304/1‑143 (MQ=255) tAAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATACAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACa > 1:46791/1‑143 (MQ=255) tAAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCACTCTCCGGCCTACa > 2:605815/1‑143 (MQ=255) gCGTTACGTGTTGACCCAAAAAGTATAGATTTGTGGGGTGGTAATTGTGGATTGCAGAAATAAAAAGAGCGGAGATGATCTCCGCCCTTTTCTTATAGCGTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAt > 2:585435/1‑143 (MQ=38) cGTTACGTGTCCACCCCAAAAGTATAGATTTGCGGGATGATAATCGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATc < 1:125385/143‑1 (MQ=255) ttACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCAt < 1:505350/143‑1 (MQ=255) tgaCGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGAGGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCAt < 1:220457/141‑1 (MQ=255) aCGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAAGTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATCGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGa < 1:551220/143‑1 (MQ=255) gtTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCCGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAAt < 1:452689/143‑1 (MQ=255) ctGACCCAAAAAGTATAGATGTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAAtt < 1:687428/142‑1 (MQ=255) gACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCa > 2:930553/1‑143 (MQ=255) ccAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATa > 1:971736/1‑143 (MQ=255) aaaaGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACAt > 2:609081/1‑143 (MQ=255) aaaGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACAtt < 1:701455/143‑1 (MQ=255) ataGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAACTTCAATACCTTGCAAg > 2:191923/1‑143 (MQ=255) tggagttGCGGGATGAGAATGGCGGATTGCAGGGAGAGAAAGGGCGGAGATGATCTCCGCCCTGTTCTGATAGCTTCTTGCCGGATGCGGCGTGAACGCCGGATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGa < 1:115784/138‑1 (MQ=25) taGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATc < 1:1009850/119‑1 (MQ=255) taGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATc > 2:1009850/1‑119 (MQ=255) gATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGAtt < 1:631160/143‑1 (MQ=255) aTTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGAtgt > 1:61724/1‑141 (MQ=255) ttGCGGGAGGAGAGTTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTc < 2:851915/143‑1 (MQ=255) gCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATGATGAAAATACAATACCCTGCAAGATATTTGt > 1:660745/1‑143 (MQ=38) gtggaggaTAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGTATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTa < 1:523698/141‑1 (MQ=255) cGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTGTTCTTATAGCATCTTGCCGGATGCGGCAGGAACGCCTTATCCGGCCTACAAACACACGAACATTCCATACATTGCAAGAtattagaa > 2:933477/1‑139 (MQ=37) cGGGATGACGATTGCGGATTGGGTAGATAACGAGTGCGGAGATGATCTGCGCCCGTTTCGTATAGCTTCTTGCCGGATGCGTTGTGAACGCCTTATCCGGCGTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTa < 2:68700/143‑1 (MQ=255) atgatAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGcc < 1:687373/143‑1 (MQ=255) tgatAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGCTGCGGCGTGAACGCGTTATCTGTGCTACGAAGTCATGAAAATTCAATACATTGCAAGATTTGCGTAGGCCt > 1:199086/1‑143 (MQ=255) tgatAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCCAGATTTTCGTAGGCCt > 2:149185/1‑143 (MQ=255) tgatAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCt < 1:1053575/143‑1 (MQ=255) tgatAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCt < 2:355008/143‑1 (MQ=255) aTTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAgc < 2:711025/143‑1 (MQ=255) tGCAGAAATCAAAAGGGCGGAGTTGCTCTGCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAGATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAgcgc < 2:397224/143‑1 (MQ=25) cAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGGTAAGCGTAGCGCAt > 1:957781/1‑143 (MQ=255) cAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCAt > 1:688835/1‑143 (MQ=255) tataagaaaaGGGCGGAGATCATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATCGCAAGATTTTCGTAGGCCTGCTAAGCGTAGCGCATcc > 1:743230/7‑142 (MQ=25) aaTAAAGAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAgg < 2:1068943/143‑1 (MQ=255) tAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAAGCCTGATAAGCGTAGCGCATCCGGCa > 2:828134/1‑143 (MQ=255) aaGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAgg > 2:33448/1‑137 (MQ=255) aaGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAgg < 1:33448/137‑1 (MQ=255) ggCGGAGATCATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGAGAAGCGAAGCGCATCAGGCACGCTAGc > 2:165859/1‑143 (MQ=255) gCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCa < 1:472234/143‑1 (MQ=255) cGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAGAATCATGAAAATTCAATACATAGCAAGAATTTCGTGGGCCTGATACGCGCGGCGCATCAGGCACACCCGCAt > 1:440130/1‑143 (MQ=21) tgatCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGCTAAGCGTAGCGCATCAGGCACGCTCGCAGGATTAg > 1:370422/1‑143 (MQ=255) tgatCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAg > 1:915963/1‑143 (MQ=255) gatCTCCGCCCTTTTCTTATAGCTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATGTTCGTAGGCCTGATAAGGGCTGAACAGCACGCACGCCCCCATCGTTAgc > 2:748515/1‑143 (MQ=18) | CATCGCCTTTCAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTAAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGC > NC_000913/3877420‑3877700 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |