| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 1,293,032 | IS1 (–) +8 bp | intergenic (‑110/‑488) | hns ← / → tdk | DNA‑binding transcriptional dual regulator H‑NS/thymidine/deoxyuridine kinase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1050545 | NA (NA) | 37 (1.140) | 32/254 | 0.1 | 100% | noncoding (768/768 nt) | IS1 | repeat region |
| ? | NC_000913 | = 1293039 | 0 (0.000) | intergenic (‑117/‑488) | hns/tdk | DNA‑binding transcriptional dual regulator H‑NS/thymidine/deoxyuridine kinase | |||||
| * | ? | NC_000913 | 1293032 = | 0 (0.000) | 27 (0.830) | 25/254 | 0.3 | 100% | intergenic (‑110/‑495) | hns/tdk | DNA‑binding transcriptional dual regulator H‑NS/thymidine/deoxyuridine kinase |
| ? | NC_000913 | = 1979270 | NA (NA) | noncoding (1/768 nt) | IS1 | repeat region | |||||
ATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1050418‑1050545‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCGAA < NC_000913/1293039‑1292914 ATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATTTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCC < 1:206059/129‑1 CTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGTTGTCGTTCTCAAAATCGTTGGAGCTGCATGACAAAGTCATTGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGG < 1:661475/129‑1 CAGCACCTGGCACGGCTGGGACGGAAGTCGCTCTCGTTCTCAAAATAGGTGGACCTGCATGCCAAAGTCATCGGGCATTATCTGAACATAAAACCCTATCAATAAGATGCAGTCATTCCCCAGCACAAc > 2:144262/1‑128 GCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTAGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGGCATTACCCGGAACAAAAT > 2:489061/1‑129 TGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGCCATTACCCGGCACAAAATAAAGA > 2:267519/1‑129 TGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGATGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAGGTTGGAGTCATTACCCGGCACAAAATAAAGA > 1:617306/1‑129 TGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAAACGAAGGAACTACATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGGCACAAAATAAAGA > 1:301029/1‑129 gCGGCTGGGACGGAAGGCGCTGTCGTTCTCAAAATCGGTTGAGCTGCATGACAAAGTTATCGGGTATTATCTGAATATAATTCACTATAAATAAGTTGGAGTCATTACCCGGCACAAAATAAAGAACAA < 1:402930/128‑1 GGCTGGGCCGGCAGTCGCTGTCGTTCTCAAAATCAATGGAACTGCAAGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGGCACAACATAAAGAACAATT > 1:477002/1‑129 TGGGACGGAAGTCGCTGTCGTTCTCAAAATCAAAAAAACTACATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGGCACAAAATAAAGAACAATGTTG > 1:685/1‑129 TCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGGCACAAAATAAAGAACAATTTTGAATTCCTTACA < 2:153112/129‑1 CTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGAGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACACGGCACAAAATAAATAACAATATTGAATTACTTACATTC > 2:279964/1‑129 TGTTGTTCTCAAAATCGGTGGAGCTGCATGACAATGTCATCGGGCATTATCTGAACATTAAACACTATCAATAAGTTGGAGTCATTACCCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCC < 2:144898/129‑1 TCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTAATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGGCACAAAATAAAGAACAATTTTGAATTACTTACATTCCTG > 2:122829/1‑129 TCTCAAAATCGGTGGAGCTGCATGACAAAATCATCGGACATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGCTA > 1:528452/1‑129 CTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCCTTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGCCACAACATCAAGACACATTTTGAATTCCTTACATGCCTGGCGAT > 2:450169/1‑129 ATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGCTATTGCACA < 2:73591/129‑1 CGGTGGGGCTGCATGACAAAGTCATCGGGCATTATCTGTACATAAAACACTATCAATCAGTTGGAGTCATTACCCGGCACAATATAAAGAACAATGTTGAATTCCTTACATTCCTGGCTATTGCACAAC < 2:525189/129‑1 TGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGA > 2:91706/1‑129 AGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATc > 1:260094/1‑128 CTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGTCACTATATAAAGATCAATTTTGAATTACTTACAGGGCTGGCTATTGCACAACTGAATTTA < 1:608299/129‑1 CTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGGCACAAAATAAATATCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTA < 1:455741/129‑1 TGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACGCTATCAATAAGTTGGAGTCATTACCCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAAataaa > 2:655130/1‑124 TGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAA > 2:291319/1‑129 accAAGTCATCGGGCATTATCCGAACATAAAACACTATCAATAAGTTGGAGTCATTTCCCGGCACAAAATAATGAACAATTTTGAATTCCTTACATTCCGGGCTATTGCACAACTGAATTTAAGGCTCT < 1:112256/126‑1 ATCGGGCATTATCTGAAGATAAAACACAATCAATAAGTGTGAGTCATTACCCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTAGCTATTACACAACTGAGTTTAAGGCTCTATTACTAC > 2:117323/1‑129 CGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGGCACAAAATAAAGAACAATTTTGAATTCCTTAAATTACTGGCTATTGCACAACTGAATTTAAGGCTCTATTATTACCT > 1:54632/1‑129 TTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTAAACAACACAAAAAAAACAACAATGAGGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAA > 1:460958/1‑129 TATCTGCACATATAACCCTATCAATAAATTGGAGTCATTACCCGGCACAAAATAAAGAACAATTTTGAATTCCTTACAGTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAA < 2:37803/129‑1 CATAAAACACTATCAATAGGTTGGAGTCATTACCCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCA < 2:617306/129‑1 TAAAACACTATCAATAAGTTGGAGTCATTACCCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTTGTTATTGTACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAAT < 1:48954/129‑1 ACACTATCAATAAGTTGGAGTCATTACCCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAA < 2:301029/129‑1 TCAATAAGTTGGAGTCATTTCCCGGCACAAAATCAAGAACAATTTTTAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGA < 2:54180/129‑1 AGTTGGAGTCATTACCCGGCACAAAATAAAGACCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTAC < 2:685/129‑1 GGAGTCATTACCCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCATCAATCTATTGCAATATAAGTTTGAGATTACTACA < 1:20092/129‑1 GTCATTACCCGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCACACTAACAGTTTGAGATGACTACAATG > 2:82839/1‑129 ACCCGGCACAAAAGAAAGAACAATTGTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCGAA < 2:654128/129‑1 ATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1050418‑1050545‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGGCACAAAATAAAGAACAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCGAA < NC_000913/1293039‑1292914 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |