| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,440,791 | C→T | intergenic (‑7/‑267) | ydbK ← / → ydbJ | putative pyruvate‑flavodoxin oxidoreductase/DUF333 domain‑containing protein YdbJ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,440,791 | 0 | C | T | 97.7% | 99.0 / NA | 45 | intergenic (‑7/‑267) | ydbK/ydbJ | putative pyruvate‑flavodoxin oxidoreductase/DUF333 domain‑containing protein YdbJ |
| Reads supporting (aligned to +/- strand): ref base C (1/0); major base T (17/25); minor base G (0/1); total (19/26) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CAGGCATCAGCCTGTTCTGCCATCGTGGAACTGGGGGTAATAGGGTAGATGGCGATAACTTCACTGGTGCGAAATGCGACCGAAGCAACCGCGCCATTACCGTCAATAGTAATCATATGACACCCTTACATTGCGCAAATGAGGGGCGCACGAAATTGCTGCGCGCCCAGTAGTAATCTTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATCAGCGTAATGAATGTTT > NC_000913/1440669‑1440918 | cAGGCATCAGCCTGTTCTGCCATCGTGGAACTGGGGGTAATAGGGTAGATGGCGATAACTTCACTGGTGCGAAATGCGACTGAAGCTACTGCGTTATTACCGTCAATAGTAATCATATGACATCCTTAc < 1:137384/129‑1 (MQ=255) ggCATCAGCCTGTTCTGCCATCGTGGAACTGGGGGTAATAGGGTAGATGGCGATAACTTCACTGGTGCGAAATGCGACCGAAGCAACCGCGCCATTACCGTCAATAGTAATCATATGACATCCTTGCAt > 2:458585/1‑129 (MQ=255) ggCATCAGCCTGTTCTGCCATCGTGGAACTGGGGGTAATAGGGTAGATGGCGATAACTTCACTGGTGCGAAATGCGACCGAAGCAACAGCGCCATTACCGTCAATAGTAATCATATGAACTCCTTACac > 2:586665/1‑128 (MQ=255) ggCATCAGCCTGTTCTGCCATCGTGGAACTGGGGGTAATAAAATAAATAACAAAAAATACACAGGTGCGAAATGCGACCGAAGCAACCGCGCCATTACCGTCAATAGTAATCATATGACATCCTTACAt > 1:82386/1‑129 (MQ=255) gCATCAGCCTGTTCTGCCATCGTGGAACTGGGGGTAATAGGGTAGATGGCGATAACTTCACTGGTGCGAAATGTGATCGAAGCAATCGTGTCATTACCGTCAATAGTAATCATATGACATCCTTACAtt < 1:519790/129‑1 (MQ=255) aTCAGCCTGTTCTGCCATCGTGGAACTGGGGGTAATAGAATAGATAGAGATAAATTCAATGGTGAGAAATGCGACCGAAGAAACCGCGCCATTACCGTCAATAGTAATCATATGACATCCTTACATTgc > 1:493440/1‑129 (MQ=255) ttCTACCATCGTGGAACTGGGGGTAATAGGGTAGATGGCGATAACTTCACTGGTGCGAAATGCGACCGAAGCAACCGCTTCATTACCTTTAATATTAATCATATGACATCATAACAAAGCGCAAATGAg < 1:362345/129‑1 (MQ=255) gCCATCGTGGAACTGGGGGTAATAGGGTAGATGGCGATAACTTCACTGGTGCGAAATGCGACCGAAGCAACCGTGCCTTTTTCTTTTATTGTTATTATATGACATCCTTACATTGCGCAAATGAGGGgc < 1:39727/129‑1 (MQ=255) ggAACTGGGGGTAATAGGGTAGATGGCGATAACTTCACTGGTGCGAAATGCGACCGAAGCAACCGCGCCATTACCGTCAATAGTAATAATATGACATCCTTACATTGCGCACATGACCGGCGCACGaaa > 2:21870/1‑129 (MQ=255) tGGGGGTAATAGGGTAGATGGCGATAACTTCACAGAAAAAAAATGCAACCGAAGCAACCGCGCCATTACCGTCAATAGTAATCATATGACATCCTTACATTGCGCAAATGAGGGGCGCACGAAATtgct > 1:482453/1‑129 (MQ=255) gtgaTAGGGTAGTGGGCGATAACTTCACTGGTGCGGAATGCGACCGAAGCTGTGGCGTCATTACCGTCAAGAGTAATCATATGACATCGTTACATTGCGCGAATGAGGTGCGCACGAAATTGTTgcgcg < 2:221954/126‑1 (MQ=255) gTAATAGGGTAGATGGCGATAACTTCACTGGTGCGAAATGCGACCGAAGCAACCGCGCCATTACCGTCAATAGTATTCATATGACTTTCTTATATTGCGCATATGAGGGGCGCACGAAATTGCTgcgcg < 1:470149/129‑1 (MQ=255) gTAGATGGCGATAACTTCACTGGTGCGAAATGCGACCGAAGCAACCGCGCCATTACCGTCAATAGTAATCATATGACATTTTTATATTGCGTAAATGAGGGGCGGACGAAATTGCGGCGCGCCCagtag < 1:8554/129‑1 (MQ=255) tAGATGGCGATAACTTCACTGGTGCGAAATACAAACAAAAAAACAAAACAATTACCGTAAATAGTAATCATATGACATCCTTACATTGCGCAAATGAGGGGCGCACGAAATTGCTGCGCGCCCagtagt > 1:191194/1‑129 (MQ=255) acaTGGCGATAACTTCACTGGTGCGAAATGCGAACGAAGCAACCGCGCCATTACCGTCAATAGTATTCTTTTTACATCTTTTTTTTTTTTAAATGAGGGGAGCACGAAAGTGCTGCGCGCCCAgtagta < 1:647472/127‑1 (MQ=255) gATAACTTCACTGGTGCGAAATGCGACCGAAGCAACCGCGCCATTACCGTCAATAGTAATCATATGACATCCTTACATTGCGCAAATGAGGGGCGCACGAAATTGATGCGCGCGCAGTAGTGAtctctc > 2:422418/1‑129 (MQ=255) aTAACTTCACTGGTGCGAAATGCGACCGAAGCAACCGCGCCATTACCGTCAATAGTAATCATATGACATCCTTACATTGCGCAAATGAGGGGCGCACGAAATTGCTGCGCGCCCAGTAGTAATCTTTCa > 1:388863/1‑129 (MQ=255) ctcTGGTGCGTAATGCGACCGGAGCAACCGCGCCATTACCGTCAATAGTAATCATATGTCATCCTTTCATTGCGCAAATGAGGGGCGCACGAAATTGCTGCGCGCCCAGTAGTAATCTTTCAATTTTAg < 2:482453/127‑1 (MQ=255) cACTGGTGCGAAATGCGACCGAAGCAACCGCGCCATTACCGTCAATAGTAATCATATGACATCCTTACATTGTGCAAATGTGTGGCGTACGAAATTGCGGCGCGCCCAGTAGTAATCTTTCAATTTTAg < 1:591752/129‑1 (MQ=255) aCTGGTGCGAAATGCGACCGAAGCAACCGCGCCATTACCGTCAATAGTAATCATATGACATCCTTACATTGCGCAAATGAGGGGCGCACGAAATTGCTGCGCGCCCAGTAGTAATCTTTCAAttttgac > 2:248351/1‑126 (MQ=255) cTGGTGCGAAATGCGACCGAAGCAACCGCGCCATTACCGTCAATAGTAATCATATGACATCCTTACATTGTGCAAATGTGTGGTGTATGAAATTGCTGCGCGCCCAGTAGTAATCGTGCAATTTTAGCa < 1:610654/129‑1 (MQ=255) aaaTGCGACCGAAGCAACCGCGCCATTACCGTCAATAGTAATCATATGACATCCTTACATTGCGCAAATGAGGGGTGTACGAAATTGTTTTGCGCCCAGTAGTAATCTTTCAATTTTAGCAAATGGCtt < 1:204967/129‑1 (MQ=255) aaaTGCGACCGAAGCAACCGCGCCATTACCGTCAATAGTAATCATATGACATCCTTACATTGCGCAAATGAGGGGCGCATGAAATTGCTGCGTGTCCAGTAGTAATCTTTCAATGTTAGCAAATGGCtt < 1:348843/129‑1 (MQ=255) aaaTGAGACCGAAGCAACCGCGCGATTACCGTCAATAGTAATCATATGACATCCTTACATTGCGCAAATGAGTGGCTTACTAAATTGCTGCGCGCCCAGTAGTAATCTTTCAATTTGAGCAAATGGCtt < 1:162897/129‑1 (MQ=255) aaTGCGACCGAAGCAACCGCGCCATTACCGTCAATAGTCCTCATTTGACTGCCGTACATTGCCAAACTTAGTTGCGCACGAAATTGCTGCGCGCCCAGTAGTAATCTTTCAATTTTAGCAAATGGCttt < 1:420863/129‑1 (MQ=255) aTGCGCCCGAAGCATCCTCTCCATTACCGTCAATAGTAATCATATGACATCCTTACATTGCGCAAATGAGGGCCGCACGAAATTGCTGCGCGCACAGTAGTAACCTTTCAGTTTTAGCAAATGGCTttc > 1:143872/1‑129 (MQ=255) gACCGAAGCAACCGCGCCATTACCGTCAATAGTAATCATATGACATCCTTACATTGCGCAAATGAGGGGCGCACGAAATTGCTGTGCTCCTAGTAGTAATCTTTCAATTTTAGCAAATGGCTTtcttct < 1:630944/129‑1 (MQ=255) ccGAAGCAACCGCGCCATTACCGTCAATAGTAATCATATGACATCCTTACTTTGCGGGACGCAGATGCGCACGAAATTTCTTCGCGCCCAGTAGTAATCTTTCAATTTTAGCAAATGGCTTTCTTCTGc < 1:655483/129‑1 (MQ=255) cGAAGCAACCGCGCCATTACCGTCAATAGTAATCATATGACACACTTACATTGCGCAAATGAGGGGCGCACGAAATCGCTGCGCGCCCAGTAGTAATCTCTCAATTTTCGCACATGGATTTCTTCCGCa > 2:601736/1‑129 (MQ=255) gAAGCAACCGCGCCATTACCGTCAATAGTAATCATATGACATCCTTACATTGCGCAAATGAGGGGCGCACGAAATTGCTGCGCGCCCAGTAGTAATCTTTCAATTTTAGCAAATGGCTTTCTTCTGCAt < 2:82386/129‑1 (MQ=255) gAAGCAACCGCGCCATTACCGTCAATAGTAAACATATAACAAAATAACATAGCACAAAAGAGGAGAGCACGAAATTGCTGCGCGCCCAGTAGTAATCTTTCAATTTTAGCAAATGGCTTTCTTCTGCAt > 1:518847/1‑129 (MQ=255) gCAACCGCGCCATTACCGTCAATAGTAATCATATGACATCCTTACATTGCGCAAATGAGGGGCGCACGAAATTGCTGCGCGCACAGTAGTAACCTTTCAATTGTAGCAAATGGCTTTCTTCTGCAtttt > 2:595018/1‑129 (MQ=255) gCAACCGCGCCATTACCGTCAATAGTAATCATATGACATCCTTACATTACGCAAATGAGGGGCGCACGAAATTGCTGCGCGCCCAGTAGTAATCTTTCAATTTTAGCAAATGCCCTTCTTCTGCAtctt > 1:624638/1‑129 (MQ=255) aCCGCGCCATTACCGTCAATAGTAATCATATGACATCCTTACATTGCGCAAATGAGGGGCGCACGAAATTGCTGCGCGCCCAGTAGTAATCTTTCAATTTTAGCAAATGGCTTtcttct < 2:638753/119‑1 (MQ=255) aCCGCGCCATTACCGTCAATAGTAATCATATGACATCCTTACATTACGCAAATGAGGGGCGCACGAAATTGCTGCGCGCCCAGTAGTAATCTTTCAATTTTAGCAAATGGCTTtcttct > 1:638753/1‑119 (MQ=255) cATTACCGTCAATAGTAATCATATGACATCCTTACATTGCGCAAATGAGGGGCGCACGAAATTGCTGCGCGCCCAGTAGTAATCTTTCAATTTTAGCAAATGGCTTtcttct > 1:489591/1‑112 (MQ=255) cATTACCGTCAATAGTAATCATATGACATCCTTACATTGCGCAAATGAGGGGCGCACGAAATTGCTGCGCGCCCAGTAGTAATCTTTCAATTTTAGCAAATGGCTTtcttct < 2:489591/112‑1 (MQ=255) aTTACCGTCAATAGTAATCATATGACATCCTTACATTGCACAAATGAAAAGCACACGAAATTGCTGCGCGCCCAGTAGTAATCTTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTgtgt > 1:620309/1‑129 (MQ=255) aCCGTCAATAGTAATCATATGACATCCTTACATTGCGCAAATGAGGGGCGCACGAAATTGCTGCGCGCCCAGTAGTAATCTTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTccc < 2:388863/129‑1 (MQ=255) ccGTCAATAGTAATCATATGACATCCTTACATTGCGCAAATGAGGGGCGCACGAAATTGCTGCGCGCCTAGTAGTAATCTTTCTATTTTTGCTAATGGTTTTCTTCTGCATTGTCGCTGTGGTGTcccc < 1:20899/129‑1 (MQ=255) cAATAGTAATCATATGACATCCTTACATTGCGCAAATGAGGGGCGCACGAAATTGCTGCGCGCCCAGTCGTAATCTTTCAATTTTAGCAAATCGCTTTCTTCTGCATTTTCTCTTTTGTGTCCCCccca > 2:120552/1‑129 (MQ=255) cAATAGTAATCATATGACATACGTACATTGCGCAAATGAGCGGCGCACGAAATTGCTGCGCGCCCAGTAGTAATCTTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCcaca < 2:209084/129‑1 (MQ=255) tAGTAATCATATGACATCCTTACATTGCGCAAATGAGGGGCGCACGAAATTGCTGCGCGCCCAGTAGTAATCTTTCAATTTTAGTATATTTTTTTTTTCTGCATTTTCGCTTTTGAGGCCCCCACATCa < 1:66300/129‑1 (MQ=255) aTCATATGACATCCTTACATTGCGCAAATGAGGGGCGCACGAAATTGCTGCGCGTCCAGTAGTAATCTTTCAATTTTAGTATTTTTTTTTTTTTTGTATTTTCGCTTTTGTGGCCCCCACATCAGCGTa < 1:82498/129‑1 (MQ=255) aTCATATGACATCCTTACATTGCGCAAATGAGGGGCGCACGAAATTGCTGCGCGCCCAGTAGTAATCTTTCAATTTTAGCAAATGGTTTTCTTTTGCATTTTCGCTTTTGTGTCCACCACATCAGCGTa < 1:21885/129‑1 (MQ=255) acCCTTACATTGCGCAAATGAGGGGCGCACGAAATTGCTTCGCGCCCAGTAGTTATCTTTCAATTTTAGCAAATGGCTTTCTTTTTCATTTTCGCTTTTGTGTCCCCCACATCAGCGTAATGAATGttt < 1:243625/129‑1 (MQ=255) | CAGGCATCAGCCTGTTCTGCCATCGTGGAACTGGGGGTAATAGGGTAGATGGCGATAACTTCACTGGTGCGAAATGCGACCGAAGCAACCGCGCCATTACCGTCAATAGTAATCATATGACACCCTTACATTGCGCAAATGAGGGGCGCACGAAATTGCTGCGCGCCCAGTAGTAATCTTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATCAGCGTAATGAATGTTT > NC_000913/1440669‑1440918 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |