New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 315413NA (NA)3 (0.060) 3/238 NT NA noncoding (185/1255 nt) IS3 repeat region
?NC_000913 = 315613 NA (NA)noncoding (385/1255 nt) IS3 repeat region

Only 100 of 562 total aligned reads displayed.

AGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/315259‑315413
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgaactcagcctgATGTTTTTCAATAAAGACATACTTCATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATAGCCAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTGAGACGTGCAATCTCGGTAGACATCTCCAGTTCACGTT  <  NC_000913/315613‑315472
                                                                                                                                                                                                                                                                                                         
aggGAGTAAAACGTCAGCCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGT                                                                                                                                                            <  2:841607/140‑1
AGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGT                                                                                                                                                            <  1:1022894/143‑1
AGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGT                                                                                                                                                            <  1:588242/143‑1
AGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGATGAACGCATCGGTGTTACTGCCGCAGCCCGT                                                                                                                                                            >  1:763995/1‑143
AGTGAGTAAACACTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGT                                                                                                                                                            <  2:1003271/143‑1
 agGAGCAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTG                                                                                                                                                           <  1:701039/141‑1
 GTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGACGCTTGCTGAACGCAGCGGTGCTCCTGCCGCCCCCCGTG                                                                                                                                                           >  1:1132021/1‑143
 GTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTG                                                                                                                                                           <  1:905869/143‑1
 GTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTG                                                                                                                                                           <  1:1097128/143‑1
  gGAGTAAACTCTCAATCAAAGGTCACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGA                                                                                                                                                          <  2:130138/142‑1
  TGAGTAAACTCTCAGTCAGAGGTGACTCAGATGGCCGCCCCATGAGCAACCAGAAAAAGTCCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGA                                                                                                                                                          <  2:1097552/143‑1
  TGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCGGCAGCCCGTGA                                                                                                                                                          >  1:815669/1‑143
  TGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCGGTGA                                                                                                                                                          >  2:1052500/1‑143
  TGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGA                                                                                                                                                          >  1:878357/1‑143
  TGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGA                                                                                                                                                          >  1:605189/1‑143
  TGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGA                                                                                                                                                          <  1:948704/143‑1
   gaggagACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTAGCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAA                                                                                                                                                         <  2:936498/137‑1
   GAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAA                                                                                                                                                         <  2:799191/143‑1
   GAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAA                                                                                                                                                         <  1:155102/143‑1
   GAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTACCGCAGCCCGTGAA                                                                                                                                                         >  1:724828/1‑143
   GAGTAAACTCTCAGCCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAA                                                                                                                                                         <  2:418839/143‑1
   GAGTAAACTCTCAATCAGAAGTGACTCACATGACAAAAACAGGATCAAGGAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAA                                                                                                                                                         <  2:672013/143‑1
   GAGTAAACGCTCAGGCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAA                                                                                                                                                         <  2:1125966/143‑1
   GAGTAAACCAGCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAA                                                                                                                                                         <  2:955333/143‑1
    AGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAACCAGCACTCGCCTGAAATTCGCACTGAAGCCCTGAACCTTGCGGAACGCCTCGGTGTTACTGCCGCAGGCCGTGAAC                                                                                                                                                        >  2:262571/1‑143
    AGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAAC                                                                                                                                                        >  1:682713/1‑143
    AGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAAC                                                                                                                                                        <  1:228306/143‑1
    AGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAAC                                                                                                                                                        >  2:613680/1‑143
     GTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACTAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACT                                                                                                                                                       >  1:1082609/1‑143
     GTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACT                                                                                                                                                       >  1:251191/1‑143
     GTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGACGCAGCCCGTGAACT                                                                                                                                                       >  1:655529/1‑143
     GTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATGCTCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACT                                                                                                                                                       >  1:344545/1‑143
     GTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGGAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACT                                                                                                                                                       <  1:568253/143‑1
      TAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACCGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTC                                                                                                                                                      >  1:987138/1‑143
      TAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCGTTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGGATTACTGCCGCAGCACGGGTACTC                                                                                                                                                      >  2:326615/1‑143
      TAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTC                                                                                                                                                      >  2:921678/1‑143
      TAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCACGTAAACAGCATGCGCCTGAATTTCGCAGTGAAGCCCTGAAACATGCTGAACGCATCGCGGTTACAGACCCAGCCCGTGACCTC                                                                                                                                                      >  2:209689/1‑143
       aaacgaTCAGTCAAAGGTGAGGCACATGACAAAAACAGTATCAACCAGTAAAAAGCCCCGTAAACAGCATCCCCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAAAGCATCGGTGCTACTGCCGCAGCCCGTGAACTCA                                                                                                                                                     <  1:617819/137‑1
       AAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAACAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGACGCCTGCTGAACGCAACGAAGGTACTCACGCAGCCCGGCAACTCA                                                                                                                                                     >  2:822717/1‑143
       AAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCACTGAAGCCACCGACCGTGCTGAACGCAACGGAGCGACTGCCGCAGCACGAGAACTCA                                                                                                                                                     >  2:182181/1‑143
       AAACTCGCAGTCAGAGGACACTAACACAACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCGGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCA                                                                                                                                                     <  2:696636/143‑1
        AACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAG                                                                                                                                                    <  1:894910/143‑1
         ACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGCAGCCCTGATGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGC                                                                                                                                                   <  1:648565/143‑1
         ACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGC                                                                                                                                                   <  1:437715/143‑1
         ACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGC                                                                                                                                                   <  1:1047003/143‑1
         ACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACGCAGC                                                                                                                                                   >  1:45411/1‑143
           TCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCCACCAGTAAAAAACCCAGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGCAGCGTGCTGAACCAATCGGTGTTACTGCAGCAGCCAGTGCACTCGGCCT                                                                                                                                                 >  1:421637/1‑143
           TCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCACCAAGTCAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGACGCCCTGCAGCTTGCTGACCCCTCCGGTGTTACTGCCGCACCCCCTGACCTCAtgct                                                                                                                                                 >  1:214387/1‑139
           TCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAGCTCAGCCT                                                                                                                                                 >  1:128618/1‑143
           TCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGCCg                                                                                                                                                 >  2:647076/1‑142
           TCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGCCg                                                                                                                                                 >  1:4921/1‑142
           TCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGCCT                                                                                                                                                 >  1:401662/1‑143
           TCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGCCT                                                                                                                                                 >  1:962042/1‑143
           TCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGCCT                                                                                                                                                 >  1:1042961/1‑143
           TCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGCCT                                                                                                                                                 >  2:876583/1‑143
           TCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTACCGCAGCCCGTGAACTCAGCCT                                                                                                                                                 >  2:1035065/1‑143
           TCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGCGTTACTGCCGCAGCCCGTGAACTCAGCCT                                                                                                                                                 >  2:1116555/1‑143
           TCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCCGAACGCACCGGTGTTACTGCCGCAGCCCGTGAACTCAGCCa                                                                                                                                                 >  2:391944/1‑142
           TCTCAGTCAGAGGTGACTCACATAACCAAAACAGTATCAGCCAGGAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGCCT                                                                                                                                                 >  1:479597/1‑143
            CTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTGCTGCCGCGGCCCGGGAACTCAGCCgg                                                                                                                                                >  1:32271/1‑141
            CTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGCCTG                                                                                                                                                <  1:625949/143‑1
            CTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGCCTG                                                                                                                                                >  1:183276/1‑143
            CTCAGTCAGAGGTGACTCACATCACAAAAACAGTATCAACCAGTAAAAACCCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGCCTG                                                                                                                                                <  2:807943/143‑1
               AGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTGAGCCggggt                                                                                                                                             >  1:364763/1‑138
                                                                                                                                          accctgcACTCAGCCTGATGTTTTTCAATAAAGCCAGACTTCATTTCAGGCGCTCCGCGAAGTATGCCGCGGCCTTTTGGAGGATAGCCAGCTCTTCATCCGGTTCGCCCAGCTGGCGTTTGAGACGTGCAATCTCGGTAGAC                  <  2:982749/136‑1
                                                                                                                                              TGACCTCAGCCTGATGTTTTTTGATAAAGACAGACTTCCTTTCTGTCGCTTCGCCAAGTATGTCGCGGCGTTTTGGGGGATAGCCAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTGAGACGTGCAATCTCGGTAGACATCT              <  2:345758/143‑1
                                                                                                                                              TGAACTCAGCCTGATGTTTTTCAATAAAGACATACTTCATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATAGCCAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTGAGACGTGCCATCTCGGTAGACCTCT              >  2:603995/1‑143
                                                                                                                                              TGAACTCAGCCTGATGTTTTTCAATAAAGACATACTTCATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATAGCCAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTGAGACGTGCAATCTCCGTAGACATCT              >  1:873130/1‑143
                                                                                                                                              TGAACTCAGCCTGATGTTTTTCAATAAAGACATACTTCATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATAGCCAGCTCATCATCACATTCTGCCAGCTGGCGTTTGAGACGTGCAATCTCGGTTGACATCT              >  1:1000262/1‑143
                                                                                                                                               gacttccGCCGGATGTTTTGCAGTAAAGACAGACTTCATTGCAGGCGCGTCGCGAAGTATGTCGCGGACTCTTGGAGGATAGCCAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTGAGACGTGCAATCTCGGTAGACATCTC             <  1:286653/136‑1
                                                                                                                                               GAACTCAGCCTGATGTTTTTCAATAAAGACATACTTCATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATCGCCAGCTCTTCATCCCGTTCTGCCCGCTGGCGTTTGAGACGTGCAATCTCGGTAGCCATCTC             >  2:733290/1‑143
                                                                                                                                               GAACTCAGCCTGATGTTTTTCAATAAAGACATACTTCATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATAGCCAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTGAGACGTGCAATCTCCGTAGACATCTC             >  2:296585/1‑143
                                                                                                                                               GAACGCGGCCTGTTGTTTTTCGATAAAGACCTGCTTCATTTCGGGCGCTTCGCGAAGTATGTCGCGGCGTTTGGGGGGATAGCCAGCTCCTCATCCCGTTCGGCCAGCTGGCGTTTGAGACGTGCAATCTCGGTAGACATCTC             <  2:1073836/143‑1
                                                                                                                                                AACTCAGCCTGATGTTTTTCAATAAAGACATACTTCATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATAGCCAGCTCTTCATCCCCTTCTGCCAGCGGGCGTTTGAGACGTGGAATATCGGTCGACAcatac            >  2:54506/1‑138
                                                                                                                                                AACTCAGCCTGATGTTTTTAAATAAAGACATACTACATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCGTTTGGAGGATATCCAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTGAGACGTGCAATCTCGGTAGACATCTCC            >  1:528268/1‑143
                                                                                                                                                 gCTCAGGCTGATGTTTTTCGATAAAGACATACTTCATTTCTGGCGCTTCGCGAAGTATGTCGCTGCCTTGTGGAGGATAGCCAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTGAGACGTGCAATCTCGGTAGACATCTCCA           <  2:526085/142‑1
                                                                                                                                                 ACTCAGCCTGATGTTTTTCAATAAAGGCATACTTCATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATAGCCAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTGAGACGTGCAATCTCGGTAGACATCTCCA           <  1:97365/143‑1
                                                                                                                                                 ACTCAGCCTGATGTTTTTCAATAAAGACATACTTCATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATAGCCAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTGAGACGTGCAATCTCGGTAGACATCTCCc           >  1:782922/1‑142
                                                                                                                                                  CTCCGCCTGATGTTGTTCAGTACAGGCATACTTCATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCCTTTGGAGGATAGCCAGCTCTTCATCCCGTTCGGCCAGCTGGCGTTTGAGACGTGCAATCTCGGTAGACATCTCCAG          <  2:775594/143‑1
                                                                                                                                                  CTCAGCCTGATGTTTTTCAATGAAGACATACTTCATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATAGCCAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTGAGACGTGCAATCTCGGTAGACATCTCCAG          <  1:542550/143‑1
                                                                                                                                                   TCAGCCTGATGTTTTTCAATAAAGACATACTTCCTTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGCGGATAGCCAGCTCTTCATCCCGTTCTGCCCGCCGGCGTTTGCGACGTGCAATCTAGGTAGACATCTCCAGT         >  1:845641/1‑143
                                                                                                                                                   TCAGCCTGATGTTTTTCAATAAAGACATACTTCATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATAGCCAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTGAGACGTGCAATCCCGGTCGACATCTACAGT         >  1:93058/1‑143
                                                                                                                                                   TCAGCCTGATGTTTTTCAATAAAGACATACTTCATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTATTGGAGGATAGCCAGCTCTTCATCCCGTTCTGCCAGCCGGCGTTTGAGACGTGCAATCTCGGTACACCTCTCCAGT         >  2:751373/1‑143
                                                                                                                                                   TCAGCCTGATGTTTTTCAATAAAGACATACTTCATTTCAGGCGCTTCGCGAAGTATGTCGAGGCCTTTTGGAGGATAGCCAGCCCTTCATCCCGTTCTGCCAGCGGGCGTTTGAGACATGCAATCTCGGTAGACACCTCCAGg         >  2:244397/1‑142
                                                                                                                                                    ccaccgGATGTTTTTCAAGAGGGACATACTCCATTTCTGGCTCTTCGCGAAGTACGTCGCGTCTTTTGGGAGGATAGCCAGCTCTGCATCCCGTTCTGCCAGCTGGCGTTTGAGACGTGCAATCTCGGTAGACATCTCCAGTT        <  2:16344/137‑1
                                                                                                                                                    CAGCTTTATGTTTTTCAATATATACATACTTCTGTTCAGGCGGTGCGCGAAGTATGGCGCGGCCTGTGGGAGGATAGCCAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTGAGACGTGCAATCTCGGTAGACATCTCCAGTT        <  1:316979/143‑1
                                                                                                                                                    CAGCCTGATGTTTTTCAATAAAGACATACTTCATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATAGCCAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTGAGACGTGCAATCTCGGTAGACATCTCCAGTT        >  2:685351/1‑143
                                                                                                                                                    CAGCCTGATGTTTTTCAATAAAGACATACTTCATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATAGCCAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTGAGACGTGCAATCTCGGTAGACATCTCCAGTT        <  1:50859/143‑1
                                                                                                                                                     AGCCTGATGTTTTTCAATAAAGACATACTTCATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATAGCCAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTGAGACGTGCAATCTCGGTAGACATCTCCAGTTC       >  1:575012/1‑143
                                                                                                                                                     AGCCTGATGTTTTTCAATAAAGACATACTTCATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATAGCCAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTGAGACGTGCAATCTCGGTAGACATCTCCAGTTC       >  1:802694/1‑143
                                                                                                                                                     AGCCTGATGTTTTTCAATAAAGACATACTTCATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCGTTTGGAGGATAGCCAGCTCTTCATCCCGTTCTGCCAGGTGGCGTTTGAGACGTGCAATCTCGGTAGACATCTCCAGTTC       >  1:748123/1‑143
                                                                                                                                                       CCTGATGTTTTTCAATAAAGACATACTTCATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATAGCCAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTGCGACGTGCAATCTCGGTAGCCATCTCCAGTTCAC     >  1:17091/1‑143
                                                                                                                                                       CCTGATGTTTTTCAATAAAGACATACTTCATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATAGCCAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTGAGACGTGCAATCTCGGTAGACATCTCCAGTTCAC     >  1:19170/1‑143
                                                                                                                                                       CCTGATGTTTTTCAATAAAGACATACTTCATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATACCCAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTGAGACGTGCAATCTCGGTAGACCTCTCCAGTTCAC     >  2:461629/1‑143
                                                                                                                                                         TGATGTTTTTCAATAAAGACCTACTTCATTTCAGGCGCTTCGCGACGTATGTCGCGGCCTTTTGGAGGATAGCCAGCTCTTCATCCCGTTCTGCCAGGTGGCGTTTGAGACGTGCAATCTCAGTAGACATCTCCAGTTtccgt   >  1:238660/1‑138
                                                                                                                                                         TGATGTTTTTCAATAAAGACATACTTCATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATAGCCAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTGAGACGTGCAATCTCGGTAGACATCTCCAGTTCACGT   >  1:737328/1‑143
                                                                                                                                                         TGATGTTTTTCAATAAAGACATACTTCATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATAGCCAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTGAGACGTGCAATCTCGGTACGCATCGCCCATTCACG  >  1:82900/1‑142
                                                                                                                                                          GATGTTTTTCAATAAAGACATACTTCATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATAGCCAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTGAGACGTGCAATCTCGGTAGCCATCTCCGGTTCACGTT  >  1:264081/1‑143
                                                                                                                                                          GATGTTTTTCAATAAAGACATACTTCATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATAGCCAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTGAGACGTGCAATCTCGGTAGACATCTCCAGTTCCCGTT  >  2:569319/1‑143
                                                                                                                                                          GATGTTTTTCAATAAAGACATACTTCATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATAGCCAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTGAGACGTGCAATCTCGGTAGACATCTCCAGTTCACGTT  <  1:959252/143‑1
                                                                                                                                                                                                                                                                                                         
AGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/315259‑315413
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgaactcagcctgATGTTTTTCAATAAAGACATACTTCATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATAGCCAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTGAGACGTGCAATCTCGGTAGACATCTCCAGTTCACGTT  <  NC_000913/315613‑315472

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.