New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 315651NA (NA)4 (0.070) 4/248 NT NA noncoding (423/1255 nt) IS3 repeat region
?NC_000913 = 315703 NA (NA)noncoding (475/1255 nt) IS3 repeat region

Only 100 of 260 total aligned reads displayed.

GTCTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/315505‑315651
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgtgctTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGACATACTTCATTTCAGGCGCTTCGCGAAGTATGTCG  <  NC_000913/315703‑315562
                                                                                                                                                                                                                                                                                                 
GTCTCACACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATCCTTCGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCG                                                                                                                                                    <  1:91752/143‑1
GTCTCAAACGCCGGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCG                                                                                                                                                    <  2:890419/143‑1
GTCTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCCGCATCACAGCAATGTTCCGCG                                                                                                                                                    >  1:334958/1‑143
GTCTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGCTCAACATCACAGCAATGTGACGCG                                                                                                                                                    >  1:975810/1‑143
GTCTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATAATACGCGAAGCGCCTGAAATGAAGTATGTCATTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAAGGTGCCGCG                                                                                                                                                    >  2:390359/1‑143
 aCTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGT                                                                                                                                                   <  1:93593/142‑1
 TCTCAAACGCCAGCTGGCGGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATCAAGTATGTCTTTATTGAAAAACATCAGGCCGAGCTCAGCATCAAAGCAACGTGCCGCGT                                                                                                                                                   >  2:556021/1‑143
 TCTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTGTCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGT                                                                                                                                                   >  1:21704/1‑143
 TCTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCACAAGGCCGCGACATACTTCGCGAAGCGCCTGCAATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGT                                                                                                                                                   >  2:21780/1‑143
 TCTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGT                                                                                                                                                   >  2:761816/1‑143
 TCTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGT                                                                                                                                                   >  1:833588/1‑143
 TCTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGT                                                                                                                                                   >  1:792115/1‑143
 TCTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGT                                                                                                                                                   >  1:755192/1‑143
 TCTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGT                                                                                                                                                   <  1:1102412/143‑1
 TCTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAAGGTGCCGCGT                                                                                                                                                   >  1:387918/1‑143
 TCTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGAAGTATGTCTTTATAGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGT                                                                                                                                                   >  1:17063/1‑143
 TCTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCCGAAATGAAGTAAGTCTTTATTGAAAAAAAACGGCGTGAGTTCAGCATCGAACCAATGTGCCGCGT                                                                                                                                                   >  2:496347/1‑143
 TCTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTACCCTCCAAAAGGCCGCGACATACTTAGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGAAACACATCAGGCTGAGTTCAGCACCAAAGCAATGTGCCGCGc                                                                                                                                                   >  2:994917/1‑142
 TCTCAAACGCCAGCTGGCAGAACGGGATGAACAGCTGGCTATCCTCCAAAGGGCCGCGTCCTACTTCGCTGAGCTCCCGGACTGAAGTATGTCTTTATTGAAAAAGTTCAGGCTGAGTTCAGCATCAAAGCCATGTCCCGCGT                                                                                                                                                   >  2:853560/1‑143
  CTCAAACGCCAGCTGGCAGGACGGGATGAGGAGCTGGCTATCCTCCGAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGATGCACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTG                                                                                                                                                  <  2:175606/143‑1
  CTCAAACGCCAGCTGGCAGAACGGGATGAATAGCTGGCTATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGAAAAACATCAGTCTGAGTTCAGCATCAAAGCAATGTGCCGCGTG                                                                                                                                                  <  1:182517/143‑1
  CTCAAACGCCAGCTGGCAGAACGGGATGAAGATCTGGCTATCTTCCAATAGGCCGCTACATACTTCTCGAAGCGACGGAAATGAGGGATGGCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTG                                                                                                                                                  <  1:517050/143‑1
  CTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATACTTCGCGCAGGGCCTGAAATGAAGTATGTCTTTATTGAAAACCATCGGGCTGACGTCCGCCTCAAAGCCATCTGCAGCGTG                                                                                                                                                  >  2:805406/1‑143
  CTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATACTTCGCGACGCGCCTGAAATGAAGTATGTCTTTATTGCAAAACATCAGGCTGAGTTCCGCATCAACGCAATGTGCCGCGTG                                                                                                                                                  >  1:407280/1‑143
  CTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTG                                                                                                                                                  <  2:434572/143‑1
  CTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTG                                                                                                                                                  >  1:274467/1‑143
  CTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTG                                                                                                                                                  <  1:903768/143‑1
  CTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGAAGAATGTCTTTATTGAAAAACATCAGGCAGAGTTCAGCATCAAAGCAATGAGGCGCGTa                                                                                                                                                  >  2:426224/1‑142
  CTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTACAAGAGGCCGCGACATACTTCGCGAAGCGGCTGAAATGAAGTATGTCTTTATTGAAAAACAACAGGCTGAGTTCAGCCTCACAGCAATGTGCCGCGTG                                                                                                                                                  >  2:908051/1‑143
   TCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGAAGTCTGTCTTTATTGAAAAACATCAGGCTGAGCTCAGCATCAAAGCAATGTGCCGCGTGC                                                                                                                                                 >  2:964682/1‑143
   TCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGAAAAACATCCGGCTGAGTTCAGCCTCACCGCCATGTGCCGCGTGC                                                                                                                                                 >  1:767023/1‑143
   TCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCACTGTGCCGCGTcc                                                                                                                                                 >  2:664603/1‑141
   TCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGC                                                                                                                                                 >  2:902635/1‑143
   TCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGC                                                                                                                                                 >  1:775023/1‑143
   TCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAACAATGTGCCGCGTGC                                                                                                                                                 >  2:273266/1‑143
   TCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATACTTCGCGAAGAGCCTGAAATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCCCGTGC                                                                                                                                                 >  2:369898/1‑143
    CAAACGCCAGCTGGCAGCACGGGATGAAGAGCTGGCTATCCTCCAAAACGCCGCGACATACTTCGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCT                                                                                                                                                <  1:1115768/143‑1
    CAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAACAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGCTCAGCATCAAAGCAATGTGCCGCGTGCT                                                                                                                                                >  2:937846/1‑143
    CAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCT                                                                                                                                                <  1:987339/143‑1
    CAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCT                                                                                                                                                >  1:244097/1‑143
    CAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGAAGTATGTCTCTATTGAAAAACATCAGGCTGAGTTCCGCATCAAAGCAAGGTGCCGCGTGCT                                                                                                                                                >  2:1081256/1‑143
     AAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGCAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTa                                                                                                                                               >  2:616880/1‑142
     AAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTACAAAAGGCCGCGACATACTTCGCGAAGCGCCTGCAATGAAGTATGTCTTTATTGAAAAACATCCGGCTGAGTTCAGCCGCCAAGCAATGTGCCGCGTGCac                                                                                                                                               >  2:705372/1‑141
        CGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAACGAAGTATGTCTTTCTTGAAAAACATCAGGCTGAGTTCAGCATCACAGCCATGTCCCGCGTGCcccgc                                                                                                                                            >  2:633655/1‑138
            AGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTTATCCTTG                                                                                                                                        >  1:304005/1‑143
                                                                 TTCGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGG                                                                                   <  2:304005/143‑1
                                                                                                                                       ctggCGCGTGCTTATCCTCGTCCGCGGCTGACACCGCGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGACATACTTCATTTCAGGCGCTACGC             <  2:779918/139‑1
                                                                                                                                          actgGTGCTTATTCTAGTCCGCCGCTGACACCCCGTATACCAGCCCCTGCGGGCCACCCGGAGCACGCGGCACATTTCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGACATATTTCATTTCAGGCGCTTCGCGAA          <  2:100660/139‑1
                                                                                                                                           gGCGTGCTTATCCTTGGCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGACATACTTCATTTCAGGCGCTTCGCGAAG         <  2:114096/142‑1
                                                                                                                                           CGCGTTCGTATCCTTGTCCGCCGCTGCAAGCACGTGTACCAGGCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGACATACTTCATTTCAGGCGCTTCGCGAAG         <  2:494626/143‑1
                                                                                                                                           CGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATCCCTGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGACATACTTCATTTCAGGCGCTTCGCGAAG         <  2:912912/143‑1
                                                                                                                                           CGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGACATACTTCATTTCAGGCGCTTCGCGAAG         <  1:1024366/143‑1
                                                                                                                                           CGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGACATACTTCATTTCAGGCGCTTCGCGAAG         <  2:1114977/143‑1
                                                                                                                                           CGCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGACATACTTCATTTCAGGCGCTTCGCGAAG         <  1:276341/143‑1
                                                                                                                                           CGCGTGCTTATCCTCGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGACATACTTCATTTCAGGCGCTTCGCGAAG         <  1:848357/143‑1
                                                                                                                                           CGCGTGCTTAGCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGACATACTTCATTTCAGGCGCTTCGCGAAG         <  1:124786/143‑1
                                                                                                                                           CGCGCGCTTATTCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGGCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGACATACTTCATTTCAGGCGCTTCGCGAAG         <  2:197942/143‑1
                                                                                                                                           CGCGCGCTGATCCTTGCGCGCCGCTGACCCCCCGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGACTGATGTTTTTCAATAAAGACATACTTCATTTCAGGCGCTTCGCGAAG         <  1:604165/143‑1
                                                                                                                                           CGCGCGCTGACCCTTGTCCGCCGCTGGCACCACGTATACCGGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGACATACTTCATTTCAGGCGCTTCGCGAAG         <  2:292341/143‑1
                                                                                                                                           CGCGCGCTCATCCCTGTCCGCCGCTGCCACCTCGTATACCACCCGTCGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCATCCTGATGTTTTTCAATAAAGACATACTTCATTTCAGGCGCTTCGCGAAG         <  2:248168/143‑1
                                                                                                                                            GCGTGCTTATCCTTGTCCGCCGCTGTCACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGACATACTTCATTTCAGGCGCTTCGCGAAGT        <  1:559076/143‑1
                                                                                                                                            GCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTTCTTTGCTGCTGAACTCGGCCTGGTGTTTTTCAAGAAAGACATAAATCATTTAAAGCGCTTAACGAAGT        >  1:386629/1‑143
                                                                                                                                            GCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGACATACTTCATTTCAGGCGCTTCGCGAAGT        <  2:594670/143‑1
                                                                                                                                            GCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTGTTTCAATAACCACATACTTCATTTCAGGCGCTTGGCGAAag        >  2:847438/1‑141
                                                                                                                                            GCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTGTGATGCTGAACTCAGCCTGATGTTGTTCAATAGAGACATACTTCATTTCAGGCGGTTCGCGAgga        >  2:892217/1‑140
                                                                                                                                            GCGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGACGCTGCGTGCCGCCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGCTGTTTTTCAATAAAGATATACTTCAATTCAAGAGCTTCGCGAAGT        >  1:887894/1‑143
                                                                                                                                            GCGTGCTTAGCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACAGTGCGTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGACATACTTCATTTCAGGCGCTTCGCGAAGT        <  1:501410/143‑1
                                                                                                                                            GCGTGCTCATCCCTGTCCGCCGCCGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGACATACTTCATTTCAGGCGCTTCGCGAAGT        <  1:1004828/143‑1
                                                                                                                                             CGTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGAGGTTTTTCAAGAAAGACATACTTCATTTCAGGCGCTGCGCGAAGTA       >  1:1070946/1‑143
                                                                                                                                              GTGCTTATCCTTTTCCGCCGCTGACACCGCGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGACATACTTCATTTCAGGCGCTTCGCGAAGTAT      <  2:466400/143‑1
                                                                                                                                              GTGCTTATCCTTGTCCGCCGCTGACTCCACGTATACCAGCCGCTGCGGGCTTCTTGGATCATGCGGTACGTTGCTGTGATGGTGAACTCAGCCTGATGTTTTTCAATAAAGACATACTTCATTTCAGGCGCTTCGCGAAGTAT      <  1:174141/143‑1
                                                                                                                                              GTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAACGACATACTTCATTTCCGGCGCTCCGCGcgctac      >  1:236618/1‑137
                                                                                                                                              GTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGACATACTTCATTTCAGGCGCTTCGCGAAGTAT      >  2:575949/1‑143
                                                                                                                                              GTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGACATACTTCATTTCAGGCGCTTCGCGAAGTAT      >  1:630056/1‑143
                                                                                                                                              GTGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTG                                                      >  1:401891/1‑95
                                                                                                                                              GTGCTGATCCTTGTCCGCCGCGGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGACATACTTCATTTCAGGCGCTTCGCGAAGTAT      <  2:259348/143‑1
                                                                                                                                               TGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGACATACTTCATTTCAGGCGCTTCGCGAAGTATa     >  1:674008/1‑142
                                                                                                                                               TGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGACATACTTCATTTCAGGCGCTTCGCGAAGTATG     >  2:597606/1‑143
                                                                                                                                               TGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGACATACTTCATTTCAGGCGCTTCGCGAAGTATG     >  1:1048390/1‑143
                                                                                                                                               TGCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTCTGATGCTGAACTCCGCCTGATGTCTTTCAATAAAGACATACTTCATTTCAGGCGCTTCGCGACGTAag     >  2:418714/1‑141
                                                                                                                                               TGCTTATCCTTGTCCGCCGCTGACACCACGTACACCAGCCGCTGCGGGCCATCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGACATAGTTCATTTCAGGCGCTTCGCGAAGTATG     >  2:590678/1‑143
                                                                                                                                                GCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGACATACTTCATTTCAGGCGCTTCGCGAAGTATGT    >  1:1037608/1‑143
                                                                                                                                                GCTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGACATACTTCATTTCAGGCGCTTCGCGAAGTATGT    <  1:958636/143‑1
                                                                                                                                                 CTTATCCTTGTTCGCCGCTGACACCACGCAAACCAGCCGCCGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGACATACTTCATTTCAGGCGCTTCGCGAAGTATGTC   <  1:290616/143‑1
                                                                                                                                                 CTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCCCATTGCTATGATGCTGAAGTCAGCCTGATGCTTCTCAATAAAGACATCCTTCATTTCAGGCGCTTCGCGAAGTATGT  >  2:1032198/1‑142
                                                                                                                                                 CTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGCTGCTGAACTCCGCCTCATGGTTTTCAATAAAGCCATGCTTCATTTCAGGCGGTGCGAGCAGGATGTC   >  2:327343/1‑143
                                                                                                                                                 CTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCAGATGTTTCCCAATAAAGACATACATCATCTCAGGCCCTTCGAGAAGTAggac   >  2:352322/1‑139
                                                                                                                                                 CTTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGCGCCACCCGGAGCACGCCGCACCTTGCTTTGATGCTGAACCCAGCCTGACGTTTTTCAATCAAAACATACTTCCTTTCAGGCGCTTCGCGAActccgta   >  2:758034/1‑136
                                                                                                                                                 CTTATCCTCGTCCTCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGGGGCACATTGCTTTGATGCTGACCTCAGCCTGATGTTTTTCAATAAAGACATACTTCATTTCAGGCGCTTCGCGAAGTATGTC   <  2:185041/143‑1
                                                                                                                                                  TTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGTGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTCTCAATACAGACATACCTCATTTCAGGCGCTTCGCGCAGTATctac  >  2:786127/1‑139
                                                                                                                                                  TTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGACATACTTCATTTCGGGCGTTTCGCGAAGTATGTCG  >  1:580226/1‑143
                                                                                                                                                  TTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGACATACTTCATTTCAGGCGCTTCGCGAAGTATGTCG  >  1:752608/1‑143
                                                                                                                                                  TTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGACATACTTCATTTCAGGCGCTTCGCGAAGTATGTCG  >  1:454318/1‑143
                                                                                                                                                  TTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGACATACTTCATTTCAGGCGCTTCGCGAAGTATGTCG  >  1:483605/1‑143
                                                                                                                                                  TTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAAACATAATTCATTTCAAGAGCTTCGCGAAGTATGTCG  >  1:602064/1‑143
                                                                                                                                                  TTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCAGGAGCATTTCAATAAAGCCATACCTCATTTCAGGCGCTTCGCGAAGCATGTCG  >  2:737074/1‑143
                                                                                                                                                  TTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACAGTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGACATACTTCATTTCAGGCGCTTCGCGAAGTATGTCG  >  1:711686/1‑143
                                                                                                                                                  TTATCCTGGTCCGCCGATGACACCACGGAGACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCGTTGATGCTGAACTCAGCCTGAGGTTTTTCAATAAAGACATACTTCATTTCAGGCGCTTCGCGAAGTATGTCG  <  1:141416/143‑1
                                                                                                                                                  TTATCCGTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGACATACTTCATTTCAGGCGCTTCGCGAAGTATGTCG  <  2:13744/143‑1
                                                                                                                                                  TTATCCCTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTGGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGACATACTTCATTTCAGGCGCTTCGCGAAGTATGTCG  <  2:397473/143‑1
                                                                                                                                                                                                                                                                                                 
GTCTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/315505‑315651
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgtgctTATCCTTGTCCGCCGCTGACACCACGTATACCAGCCGCTGCGGGCCACCCGGAGCACGCGGCACATTGCTTTGATGCTGAACTCAGCCTGATGTTTTTCAATAAAGACATACTTCATTTCAGGCGCTTCGCGAAGTATGTCG  <  NC_000913/315703‑315562

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.