| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| MC JC | NC_000913 | 3,815,859 | Δ82 bp | 100% | [rph] | [rph] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3815859 | 3815940 | 82 | 47 [0] | [1] 49 | [rph] | [rph] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3815858 | 0 (0.000) | 38 (0.720) | 30/244 | NT | 100% | intergenic (‑90/+5) | pyrE/rph | orotate phosphoribosyltransferase/truncated RNase PH |
| ? | NC_000913 | 3815941 = | 0 (0.000) | coding (609/687 nt) | rph | truncated RNase PH | |||||
CAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATC‑AGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3815708‑3815858‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCT > NC_000913/3815941‑3816082 CAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATC‑AGTCGCCTTAAAAATCAGTTTGCCAGCGCCG > 1:920278/1‑143 AAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAACAGGCGACTCATC‑AGTCGCCTTAAACATCAGTTTGCCAGCGCCGC > 2:923097/1‑143 ACACCTGCTTGCTAAGCGCATATGCAATAAACTGGCGCTGATATGGTTTCATGCCTGCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATC‑AGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCC < 2:891389/143‑1 ACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATC‑AGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGT < 2:354033/143‑1 CCTGCTTGCTAAGCGCAAATTCAATCACCTGTCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATC‑AGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTC < 2:66731/143‑1 gccTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATC‑AGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCC < 1:836636/140‑1 CTTGCTATTCGCAAATGCAAGAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATC‑AGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCT < 1:840357/143‑1 GCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATC‑AGTCGCCTTAAACATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCA > 1:207636/1‑143 GCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATC‑AGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAAT > 2:503400/1‑143 caaaacCAATAAACTGGCGCTGATATGGTTTCATGCCGTCGCATGTTATCTTACTTTTCAAAAGACAAAAAAAAGGCGACTCATC‑AGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATG < 2:937744/137‑1 TAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGACGACTCATC‑AGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCCCCCc > 2:603188/1‑142 GCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAACAAAGGCGACTCATC‑AGTCGCCTTAAAACTCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGACGCGCCCGTCTTCGG > 2:745225/1‑143 ATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATC‑AGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCCATGATGCGCCCGTCTTCGATCATCACT > 1:894057/1‑143 TTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATC‑AGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACCTCAATGATGCGCCCGCCTCCGGTCACCACTACGT > 2:310824/1‑143 TCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATC‑AGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCTATGATGCGCCCGTCTTCGGTCCTCACCACcgtc > 2:735839/1‑139 ATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATC‑AGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCAT < 1:392716/143‑1 TGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATC‑AGTCGCCTTAAAAATAAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCAGAACTTCAATGATGCGCCAGTCTTCGCTCATCACTCAGTTCATG > 2:100367/1‑143 TTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATC‑AGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGG > 1:1102760/1‑143 CTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATC‑AGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCACGTCTTCGGTCACAACAACGTGCATGTCGGTCTCTac > 1:816798/1‑141 CTTACTTTTCTACAGACAAAAAAAAGGCGACTCATC‑AGTCGCCTTAAAAATCAGTTTGCCAGCGCTGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCACGTCTTCGGTCATCACTCCGTTCACGTCGGTCTCTGCGGCgg > 2:769030/1‑141 CTTACTTTTCTACAGACAAAAAAAAGGCGACTCATC‑AGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAG > 2:895916/1‑143 CTTACTTTTCTACAGACAAAAAAAAGGCGACTCATC‑AGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCATGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTCCGTTCATGTCGGTCTCTGCGGCAG > 1:897966/1‑143 TTACTTTTCTACAGACAAAAAAGAGGCGAC‑CGTCGTGCCTTCTTTAAATTCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGA < 2:495485/143‑1 TTTTCTACAGACAAAAAAAAGGCGACTCATC‑AGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCCTCACTACGTTCATGCCGGTCTCTACGGCAGAGTCT > 1:169399/1‑143 TTTTCTACAGACAAAAAAAAGGCGACTCATC‑AGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGCGTCT > 1:310127/1‑143 TTTTCTACAGACAAAAAAAAGGCGACTCATC‑AGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCACCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGCCTCTGCGGGAGAGTCT > 1:748011/1‑143 TACAGACGAAAAAAAGCCGCCTCATC‑AGCCGCCTTAAACATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAAC < 2:993883/143‑1 acAAGGCGACTCATC‑AGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGAT < 1:69937/141‑1 AAAAGGCGACTCATC‑AGTCGCCTTAAAACTCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACAACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGAT < 2:398652/143‑1 AAAAGGCGACTCATC‑AGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGAT < 1:25840/143‑1 agAGGCGACTCATC‑AGTCGCCTTAAAAATCAGTGTGCCAGCGCCGCCTTCTGCCGTCGCCTCCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATC < 2:676540/141‑1 GGCGACTGATG‑AGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCACATGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTACGCGGCAGAGCCTTCAACGTATTCCAGATCGCA > 2:152998/1‑143 GGCGACTGATG‑AGTCGCCTTAAAAATCAGTTTGCCAGAGCAGCCCTCCGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCCGACGCTTCAACGCATTCCAGCTCGCA > 2:923604/1‑143 ATC‑AGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTT < 2:920278/143‑1 TC‑AGCCTCCTTAAAGAGCAGTGTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTC < 2:384418/143‑1 AGTCGCCTTAAAAATCAGTTTGACAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGAACACCACGACGCTCATGTCGGGCTCTGCCGCAGACTCTCCCACGCATTCCAGACCTCAAACCGCTTCGC > 2:612359/1‑143 CGCCCTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGT < 2:216087/143‑1 CCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTTCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTC < 1:19983/143‑1 CCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCAGCACTACGTTCAAGTCGGACCCGACGGCAGAGGCCTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTC > 1:618526/1‑143 AGTTTGCCCGCGCCGCCTTCTGCCGTCCCCTGCACTTCCATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGAC < 2:55779/143‑1 TTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAG > 2:879209/1‑143 TTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCAATTAGCAGTTCACAATTCCGACAG > 1:115484/1‑143 CAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAAGCGCTTCGCCGTTCACAATTCCGACAGAAACT > 1:935925/1‑143 CGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCGACGTAATCCAGATCGCAAACCGCTACGCCGTTCACAGACCCGACGGAAACGGCGGat > 2:336704/1‑141 GCCTTCTGCCGTGCCCTGGACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTA < 2:270221/143‑1 GCCTTCTGCCGTCCCCCGCACTTCAATGAGGCGCCCGTCTTCGGTCATCACGACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTA < 1:331381/143‑1 TTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCTTTCACAATTCCGACAGAAACTGCGGCTACCA > 2:560294/1‑143 CCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCCCACTTCCGACAGAAACTGCGACTACCATCCCT > 1:893978/1‑143 CCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCT < 2:14457/143‑1 CAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATC‑AGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3815708‑3815858‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCT > NC_000913/3815941‑3816082 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |