New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 501495 =NA (NA)4 (0.070) 4/256 NT NA noncoding (3/36 nt) other REP46b
?NC_000913 501521 = NA (NA)noncoding (29/36 nt) other REP46b

ACCAGCATTCACCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGC  >  NC_000913/501353‑501635
                                                                                                                                               |                                                                                                                                            
aCCGGCATTCACCTCGTCTCAGGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGGGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCt                                                                                                                                              <  2:4545/143‑1 (MQ=39)
aCCGGCATTCACCGCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCt                                                                                                                                              <  2:166076/143‑1 (MQ=255)
aCCAGCATTCCCCCAATCTACCGACCGCCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTGACGTTCTCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCt                                                                                                                                              <  1:219268/143‑1 (MQ=37)
  cAGCATTCACCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGa                                                                                                                                            <  2:194361/143‑1 (MQ=255)
  acgtggtgcgaatcaggtattgattggcgatcgtgaaatcgcccgtaccatgctggaactggtggaaacgccaccggcgggtgaggtggtgacggggtaaacggtggttgccggatgtaaaatatgaaaaatatgtaggcatg                                                                                                                                             >  1:287027‑M1/142‑143 (MQ=255)
   ccgtgcgcgcatcaggtagtgctgggcggtcgtcaaatcgcccgtaccatgctggaactgctggaaacgccaccggcgggtgaggtggtgacggggtaaacggtggttgccggatgtaaaatatgaaaaatatgtaggcatga                                                                                                                                            >  2:1119211‑M1/141‑143 (MQ=255)
    tgggtgcgcagcaggtagtgatgggcgggcgggaaaccgcccgtagcatgctggaactgctggaaacgccaccggcgggtgaggtggtgacggggtaaacggtggttgccggatgtaaaatatgaaaaatatgtaggcatgat                                                                                                                                           >  2:532720‑M1/140‑143 (MQ=255)
    gCATTCACGTCGTGTAACGCGCGGCGTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATg                                                                                                                                          <  1:607060/143‑1 (MQ=255)
          aCCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGCTAAAGCGGGGCGAGCGGAGCTGGAATTTGTCTCTCGATGCCTGATGCGACGc                                                                                                                                    >  1:253436/1‑143 (MQ=255)
          aCCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGc                                                                                                                                    >  2:764399/1‑143 (MQ=255)
             tCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTgg                                                                                                                                 >  1:775696/1‑143 (MQ=255)
             tCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCGCGATGGCTGAGGCGACGCTgg                                                                                                                                 >  2:272195/1‑143 (MQ=255)
                  tAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGGGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGt                                                                                                                            <  2:149705/143‑1 (MQ=255)
                     gcgaggggcgggcgtgaaatcgcccgcaccatgctggaactgcgggaaccgccacgggcgggtgaggtggggacggggtagacggtggttgccggatgtaaaatatgaaaaatatgtaggcaTGATAAGACGCTGGCGCGTCt                                                                                                                          >  1:20517‑M1/123‑143 (MQ=255)
                          ggtgtGCCGCAGCCTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCTACGCTGGCGCGTCTTATCAt                                                                                                                    <  1:962586/139‑1 (MQ=255)
                          ggCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCAt                                                                                                                    <  1:304107/143‑1 (MQ=255)
                           ggcgagcgtgaaatcgcccgtaccatgctggaactgctggaaacgccaccggcgggtgaggtggtgacggggtaaacggtggttgccggatgtaaaatatgaaaaatatgtaggcaTGATGCGACGCTGGCGCGTCTTATCAt                                                                                                                    >  1:84239‑M1/117‑143 (MQ=255)
                             ttGTCGCAGCGTTAAAACAGCCTCGAAGAGTCTTACTGGGATCGTTAAGTCATCGTCGTTTCGTAGGCCAGCTAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGcc                                                                                                                 <  2:100918/143‑1 (MQ=37)
                               gCCGGAGCGTGAAGAAAGCCTGGGAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTa                                                                                                               <  1:699857/143‑1 (MQ=255)
                                       gTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATCtttt                                                                                                       >  2:792406/1‑143 (MQ=255)
                                       gTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATACTGCCTACATAtttc                                                                                                       >  1:1095292/1‑142 (MQ=255)
                                       gTGAAGACAGCCTGAAAGAGTCTTACTGCGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATAtttt                                                                                                       <  2:825815/143‑1 (MQ=255)
                                       atagcccgtaccaggcgggaacggctggaaacgccaccggcgggtgaggtggtgacggggtaaacggtggttgccggatgtaaaatatgaaaaatatgtaggcaTGATGCGACGCTGGCGCGTCTTATCATGCCTACATAttt                                                                                                        >  1:13648‑M1/105‑143 (MQ=255)
                                        tcgcccgtaccatgctggaactgctggaaacgccaccggcgggtgaggtggtgacggggtaaacggtggttgccggatgtaaaatatgaaaaatatgtaggcaTGATGCGACGCTGGCGCGTCTTATCATGCCTACATAtttt                                                                                                       >  1:453317‑M1/104‑143 (MQ=255)
                                          aaGACAGCCTGCAACAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCa                                                                                                    <  1:289305/143‑1 (MQ=255)
                                            gACAGCCTGGAAGAGTCGTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCata                                                                                                  <  1:1091032/143‑1 (MQ=255)
                                                     gAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGGCTACATATTTTTCATATTTTACATc                                                                                         >  1:13836/1‑143 (MQ=255)
                                                      aaGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGACCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATCACTGATGCTTCGCTGGCACGTCGTAGCATGCCTACATGTTTTTAATATTTTACATcc                                                                                        >  2:73584/1‑143 (MQ=37)
                                                        gagTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCgg                                                                                      >  1:455885/1‑143 (MQ=255)
                                                        gactgttACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCgg                                                                                      <  1:756799/138‑1 (MQ=255)
                                                           tcgtACTGGGATGGTTATGTTATCGGGGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCaa                                                                                   <  2:421411/140‑1 (MQ=37)
                                                             ttACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGCTGCGACGCTGGCGCGTCTTCTCCTGGCAACGTGTTTTTCATATTTTACATCCGGCAacc                                                                                 >  1:468450/1‑143 (MQ=38)
                                                             ttACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATGTTTCATTTTCTACCTCGGGCAaca                                                                                 >  2:327609/1‑142 (MQ=37)
                                                              tACTGTGATCGTTAAGTTATCGTCGGTTCTTAGGCCAGATAAGGCATTAGCACGGTAGCTTGCATGTGCCTCGCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAacca                                                                                <  1:822789/143‑1 (MQ=25)
                                                                    gATCGTGAAGTTATCGGCGGTTCGGAGGCCAGGTAAGGCGTTCAGCCCCGCGCGGGCAGTTGGCATTCGATATTTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGttt                                                                          <  2:500442/143‑1 (MQ=25)
                                                                      tCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACAACCGTTTAc                                                                        <  2:1056669/143‑1 (MQ=255)
                                                                        gTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCCCTCGGCTCTCGGTGCCTGATGCGACGCTGTCGCGTCTTATCATAACAACATATTGTTCATATTTTACATCCGGCAGCCACCGTTTAccc                                                                      >  1:291153/1‑143 (MQ=37)
                                                                         ttAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGTATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACTTCTTTTTCATATTTTACATCCGGCAACCACCGTTTAcccc                                                                     <  2:683415/143‑1 (MQ=255)
                                                                         ttAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCCCCAtttcgccc                                                                     >  2:327253/1‑138 (MQ=255)
                                                                         ttAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTAcccc                                                                     <  1:626943/143‑1 (MQ=255)
                                                                                 tcgtcgGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTcaccac                                                             <  1:939564/143‑1 (MQ=255)
                                                                                   gtcgGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCACGCAACCACCGTCTACCCAGTcgcccact                                                           >  2:292703/1‑139 (MQ=25)
                                                                                     cgGTTCGTAGGCCACATAAGTCGTTCACGCCGCATCTGTTATTTGGCTCTCGATTCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCTCa                                                         <  1:925281/143‑1 (MQ=38)
                                                                                      ggTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGCCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCTCAc                                                        >  2:615694/1‑143 (MQ=255)
                                                                                            tAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCCACCACCGTTTACCCCGTCACCACCTCACccgccg                                                  >  1:602654/1‑143 (MQ=255)
                                                                                            tAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCTCACccgccg                                                  >  1:197952/1‑143 (MQ=255)
                                                                                            tAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTAGCACTAGGTACATTATGCGACGCTGGCGCGTCTTATCATGGTGACATAGTAATCATATATTACCTCCGGCTACCACCGTTTACCCCGTCACCACCTCACccgccg                                                  >  1:1008594/1‑143 (MQ=25)
                                                                                               gCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTCTCCTGCCTACTTATTTTTCATATTTTACATCCGGAAACAACCGTATACCCCGTCACCACCTCACCCGCCGGTg                                               >  1:642433/1‑143 (MQ=38)
                                                                                               gCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACCTCCGGCAACCACCGTTTACCCCGTCACCACCTCACCCGCCGGTg                                               >  1:516012/1‑143 (MQ=255)
                                                                                                ccAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCTCACCCGCCGGTgg                                              <  2:962935/143‑1 (MQ=255)
                                                                                                 cAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCTCACCCGCCGGTGGc                                             >  1:954500/1‑143 (MQ=255)
                                                                                                   gATAAGGCGTTCACGCCGCATCTCGCGTTCGCGGCACGAGGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCTCACCCGCCGGTGGCGt                                           <  1:764399/143‑1 (MQ=37)
                                                                                                         gCGTTCCCGTCGAATCTGGCATTTGGCGCTCGATGCCTGAGGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCAGAGTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCcag                                     <  2:519289/143‑1 (MQ=38)
                                                                                                         gCGTTCAGGCTGCGTCTGGTATTTGGCTCTCGATGCCTGATGCTCCGCTGGCTCGTCTTATCATGCCTACATATTTTTCATATTTTACATCTGGCAACCACCGTTTACCCCGTCACCACCTCACCCGCCGGTTGCGTTTCcag                                     <  2:1042038/143‑1 (MQ=255)
                                                                                                         gCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCAGCGTGTACCCCGTCACCACCTCACCCGCCGGTGGCGTCTCcag                                     >  1:702539/1‑143 (MQ=255)
                                                                                                         gCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCcag                                     >  1:905411/1‑143 (MQ=255)
                                                                                                           gTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCTCACCCGCCCGTGGCGttacaaaca                                   >  2:358744/1‑136 (MQ=255)
                                                                                                            ttCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCcagcag                                  >  1:231412/1‑143 (MQ=255)
                                                                                                               aCGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCCACCACCGTTTACCCCGTCACCACCTCACCCGCCGGCGGCGCTTCCAGCAATTc                               >  2:294833/1‑143 (MQ=255)
                                                                                                                 cgccgcATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTGTCATGCCTACATATTTTTCATATTTGACATCCGGCAACCACCGTTTACCCCGTCACCACCTCACCCGCCTGTGGCGTATCGAGGAGTTca                              >  1:619017/1‑142 (MQ=38)
                                                                                                                 cgccgcATCTGGCATTTGGCTCGTGATGCCTGATGCGACTCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCTCACCCGCTGGTGGCGTTTCCAGCAGTTcc                              <  2:139916/143‑1 (MQ=255)
                                                                                                                  gccgcATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCa                             >  2:733677/1‑143 (MQ=255)
                                                                                                                    cgcATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCACGTCACTACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGc                           <  1:749065/143‑1 (MQ=255)
                                                                                                                    cgcATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTCCATATTTTACATCCGGCAACCACCGTTTCCCCCGTCACCACCTCACCCGCCGCCGGCGCTTCCAGCCGCCCCAGc                           >  2:798189/1‑143 (MQ=38)
                                                                                                                         cTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCATCTCAGCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGt                      >  1:95230/1‑143 (MQ=255)
                                                                                                                         cTGGCATCGGGCTCTCGATGCCTGATGCGGCGCTGGCGCGTCTTATCATGCCTACATATTTTTCCTATTGTACATCCGGCAACCACCGTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGt                      <  2:1031975/143‑1 (MQ=39)
                                                                                                                          tGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCCCCACCTCACCCGCCGGTGGCGTGTCCAGCAGTTCCAGCCTGGTa                     >  1:536164/1‑143 (MQ=255)
                                                                                                                          tGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCTCACCCGCCGGTGGCGCTTCCAGCAGTTCCAGCATGGTa                     >  1:151279/1‑143 (MQ=255)
                                                                                                                           ggCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTAc                    >  2:402543/1‑143 (MQ=255)
                                                                                                                           ggCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCTCACCCGCCGGGGGCGTCTCCAGCGCTTCCAGCacgcaac                    >  2:909122/1‑137 (MQ=38)
                                                                                                                            gCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTCCCACCAGTTCCAGCATGGTCCg                   >  2:964694/1‑143 (MQ=255)
                                                                                                                              aTTTGTCTCTCTATGCCGGATGCGACGCTTGCGCGTCTTATCATGCCTACATATTGTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACggg                 <  2:965903/143‑1 (MQ=39)
                                                                                                                                       tcGATACCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCCGCCTCGTACGGGCGATTTCAc        >  1:269205/1‑143 (MQ=255)
                                                                                                                                         gATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTCTCCAGCAGTTCCAGCATGGTACGGGCGATACCACGc      >  2:1023578/1‑143 (MQ=255)
                                                                                                                                          aTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGCCGCTTTCACGCt     >  1:840741/1‑143 (MQ=255)
                                                                                                                                            gCCTGATGCGCCGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCg   <  1:572772/143‑1 (MQ=255)
                                                                                                                                             cgTGATGTGATGCTGGCGCGTCTTATCATGTCTTCATTTTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCTCACCCGCCGGTGGCGGTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGc  >  1:310546‑M1/3‑143 (MQ=255)
                                                                                                                                             ccTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCCGCAGTTCCAGCATGGTACCGGCGATGTCACGCTCGc  <  2:455885/143‑1 (MQ=255)
                                                                                                                                               |                                                                                                                                            
ACCAGCATTCACCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCTCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGC  >  NC_000913/501353‑501635

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.