Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 2,513,638 A→G 7.8% V199V (GTA→GTG nupC → nucleoside:H(+) symporter NupC

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,513,6380AG 7.8% 165.4 / 3.5 64V199V (GTA→GTGnupCnucleoside:H(+) symporter NupC
Reads supporting (aligned to +/- strand):  ref base A (28/29);  new base G (3/2);  total (33/31)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.38e-01

AAGATATCCTCGGCAAAATCTCCCGTAATCGTATGTACACCATGGCTGCCACGGCAATGTCCACCGTGTCGATGTCCATCGTTGGTGCATACATGACCATGCTGGAACCGAAATACGTCGTTGCTGCGCTGGTACTGAACATGTTCAGCACCTTTATCGTGCTGTCGCTGATCAATCCTTACCGTGTTGATGCCAGTGAAGAAAACATCCAGATGTCCAACCTGCACGAAGGTCAGAGCTTCTTCGAAATGCTGGGTGAATACATTCTGGCAGGTT  >  NC_000913/2513505‑2513780
                                                                                                                                     |                                                                                                                                              
tatatatTCTCGGCAAAATCTCCCGTAATCGTATGTACACCATGGCTGCCACGGCAATGTCCACCGTGTCGATGTCCATCGTTGGTGCATACATGACCATGCTGGAACCGAAATACGTCGTTGCTGCGCTGGTACTGAACATg                                                                                                                                       <  2:967616/140‑1 (MQ=255)
      tCCGCGGCAAAATCTCCGGTGATCGTATGTACACCATGGCTGCCACGGCAATGTCCACCGTGTCGATGTCCATCGTTGGTGCATACATGACCATGCTGGAACCGAAATACGTCGTTGCTGCGCTGGTACTGAACATGTTCAGc                                                                                                                                 <  2:296210/143‑1 (MQ=255)
         tCGGCAAAATCTCCCGTAATCGTATGTACACCATGGCTGCCACGGCAATGTCCACCGTGTCGATGTCCATCGTTGGTGCATACATGACCATGCTGGAACCGAAATACGTCGTTGCTGCGCTGGTACTGAACATGTTCAGCAcc                                                                                                                              >  1:4224/1‑143 (MQ=255)
              aaaaTCTCCCGTAATCGTATGTACACCATGGCTGCCACGGCAATGTCCACCGTGTCGATGTCCATCGTTGGTGCATACATGACCATGCTGGAACCGAAATACGTCGTTGCTGCGCTGGTGCTGAACATGTTCAGTAccagcgc                                                                                                                         <  1:398685/143‑6 (MQ=255)
                  tctcCCGTAATCGTATGTACACCATGGCTGCCACGGCAATGTCCACCGTGTCGATGTCCATCGTTGGTGCATACATGACCATGCTGGAACCGAAATACGTCGTTGCTGCGCTGGTACTGAACATGTTCAGCACCTTTATCGTg                                                                                                                     <  2:551610/143‑1 (MQ=255)
                  tctcCCGTAATCGTATGTACACCATGGCTGCCACGGCAATGTCCACCGTGTCGATGTCCATCGTTGGTGCATACATGACCATGCTGGAACCGAAATACGTCGTTGCTGCGCTGGTACTGAACATGTTCAGCACCTTTATCGTg                                                                                                                     <  1:724288/143‑1 (MQ=255)
                  tctcCCGTAATCGTATGTACACCATGGCTGCCACGGCAATGTCCACCGTGTCGATGTCCATCGTTGGTGCATACATGACCATGCTGGAACCGAAATACGTCGTTGCTGCGCTGGTACTGAACATGTTCAGCACCTTTATCGTg                                                                                                                     <  1:581169/143‑1 (MQ=255)
                     cccGTAATCGTATGTACACCATGGCTGCCACGGCAATGTCCACCGTGTCGATGTCCATCGTACGCGCACACATGACCCTGCCGGTACCGCAATACGTCGCTGCTGCGCTGGTCCCGTACATGTTCAGCACGTTCATCGTGCTg                                                                                                                  >  2:847170/1‑143 (MQ=255)
                      ccGTAATCCTATGTACTCCATGGCTGCCACCACCATGTCCTCCGCGTCCCTGTCCTACGCTGGTGCACACACGACCACGCTGCAACCCACATACGCCATCGCAAAAGAGAAGCTGAACATGTTCAGCACCTTTATCGTGCTGt                                                                                                                 <  2:400565/143‑1 (MQ=255)
                       cGTAATCGTATGTACACCATTGCTGCAACGGCAATGTCCACCGTATCGATATCCATCGATGGTGAATACATAACCATGCTGGAACCGAAATACGTCGTAGCTGCGCTGGTACTGAACACAGTCAGCACCTTAACAGTGCTGTc                                                                                                                >  2:871728/1‑143 (MQ=255)
                        gTAATCGTATGTACACCATGGCTGCCACGGCAATGTCCACCGTGTCGATGTCCATCGTTGGTGCATACATGACCATGCTGGAACCGAAATACGTCGTTGCTGCGCTGGTACTTAACATGTTCAGCCACTTTATCGTGCTGTCg                                                                                                               >  2:180244/1‑143 (MQ=255)
                         tactCGTGTGTACACCATGGCTGCCACGGCAATGTCCACCGTGTCGATGTCCATCGTTGGTGCATACATGACCATGCTGGAACCGAAATACGTCGTTGCTGCGCTGGTACTGAACATGTTCAGCACCTTTATCGTGCTGTCGc                                                                                                              <  1:498409/140‑1 (MQ=255)
                          aaTCGGATGTACACCATTGCTGCCACGGGAATGTGCACCGAGTCGATGGCCATCGTTGGTGCATACATGACCATGCTGGAACCGAAATACGTCGTTGCTGCGCTGGTACTGAACATGTTCAGCACCTTTATCGTGCTGTCGCt                                                                                                             <  1:488896/143‑1 (MQ=255)
                           aTCGTATGTACACCATGGCTGCCACGGCAATGTCCACCGTGTCGATGTCCATCGTTGGTGCATACATGGCCATGCTGGAACCGAAATACGCCGTTGCTGCGCGGGTACTGAACAAGATAAGCACCCTTGTCGTGCTGCGGCTg                                                                                                            >  2:26369/1‑143 (MQ=255)
                             ggTATGGACGCCATGGCTGCCACGGCAATGTCCACCGTGTCGATGTCCAGCGTTGGTGCATACATGACCATGCTGGAACCGAAATACGTCGTTGCTGCGCTGGTACTGAACATGTTCAGCACCTTTATCGTGCTGTCGCTGAt                                                                                                          <  2:57700/142‑1 (MQ=255)
                               tATGTACACCATGGCTGCCACGGCAATGTCCACCGTGTCGATGTCCATCGTTGGTGCATACATGACCATGCTGGAACCGAAATACGTCGTTCGTACGCGGTGACTTACCATGTTCAGCACCTTCATCGTGATGTCGCTGACCa                                                                                                        >  1:473740/1‑143 (MQ=255)
                                ttgtcacccAGGGCCGCCACCGCAATGGCCACCGTGTCGATGTCCCTCGTTGGTGCATACATTACCAGGCTGGAACCGAAATATGTCGTTGCTGCGCTGGTACTGAACATGTTCAGCACCTTTATCGTGCTGTCGCTGATCaa                                                                                                       <  2:17464/136‑1 (MQ=255)
                                     cacCATGGCTGCCACGGCAATGTCCACCGTGTCGATGTCCATCGTTGGTGCATACATGACCATGCTGGAACCGAAATACGTCGTTGCTGCGCTGGTCCTGAACATGTTCAGCACCTTTATCGTGCTGTCGCTGATCACTCCtt                                                                                                  >  1:421149/1‑143 (MQ=255)
                                       ctaTGGCTTCCACGGCAATGTCGCCCGTGTCGATGTCCATCGTTGGTGCATACATGACCATGCTGGAACCGAAATACGTCTTTGCTGCGCTGGTACTGAACATGTTCAGCACCTTTATCGTGTTGTCGCTGATCAATCCTTAc                                                                                                <  2:931958/141‑1 (MQ=255)
                                        cATGGCTGCCACGGCAATGTCCACCGTGTCGATGTCCATCGTTGGTGCATACATGACCATGCTGGAACCGAAATACGTCGTTGCTGCGCTGGTACTGAACATGTTCAGCACCTTTATCGTGCGGTCGCCGATCAAGCCTTAcc                                                                                               >  2:772436/1‑143 (MQ=255)
                                            gCTGCCACGGCAATGTCCACCGTGTCGATGTCCATCGTTGGTGCATACATGACCATGCTGGAACCGAAATACGTCGTTGCTGCGCTGGTACTGAACATGTTCAGCACCTTTATCGTGCTGTCGCTGATCAATCCTTACCgcgt                                                                                           >  2:148003/1‑143 (MQ=255)
                                               ggcACGGCAATGTCCACCGTGACGATGTCCATCGTTGGTGCATACATGACCATGCTGGAACCGAAATACGTCGTTGCTGCGCTGGTACTGAACATGTTCAGCACCTTTCTCGTGTTGTCGCTGATCAATCCTTACCGTGTTGa                                                                                        <  1:529099/141‑1 (MQ=255)
                                               gCCACGGCAATGTCCACCGTGTCGATGTCCATCGTTGGTGCATACATGACCATGCTGGAACCGAAATACATCGTTGCTGCGCTGGTACTGAACATGTTCAGCACCTTTGTAGGGCTGTCGCTGATCAATCGTTACCGTGTTgc                                                                                        >  2:540963/1‑142 (MQ=255)
                                                  aCGGCAATGTCCACCGTGTCGATGTCCATCGTTGGTGCATACATGACCATGCTGGAACCGAACTCCGTCGTTGCTGCGCTGGTACTGAACATCTTCAGCACCTTTATCGTGCTGTCGCTGATCAATCCTTACCGTGTTGATGc                                                                                     >  1:255675/1‑143 (MQ=255)
                                                  aCGGCAATGTCCACCGTGTCGATGTCCATCGTTGGTGCATACATGACCATGCTGGAACCGAAATACGGCGTTGCTGCGCTGGTACTGAACATGTTCAGCACCTTTATCGTGCTGTCGCTGATCAATCCTTACCGTGTTGATGc                                                                                     >  1:318626/1‑143 (MQ=255)
                                                   cGGCAATGTCCACCGTGTCGATGTCCATCGTTGGTGCATACATGACCATGCTGGAACCGAAATACGTCGTTGCTGCGCTGGTACTGAAAATGCTCAGCACCGTTATCGTGCTGTCGCTGCTCAATCCTTACCGTGTTGTTGcc                                                                                    >  1:256544/1‑143 (MQ=255)
                                                    ggCAATGTCCACCGTGTCGATGTCCATCGTTGGTGCATACATGACCATGCTGGAACCGAAATACGTCGTTGCTGCGCTGGTACTGAACATGTTCAGCACCTTTATCGTGCTGTCGCTGATCAATCCTTACCGTGTTGATGCCa                                                                                   >  2:713968/1‑143 (MQ=255)
                                                      ccacgTCCACCGTGTCGATGTCCATCGTTGGTGCACACATGACCATGCTGCAACCGAAATACGTCGTTGCTGCGCTGGTACTGAACATGTTCAGCACCTTTATCGTGCTGTCGCTGATCAATCCTTACCGTGTTGATGCCAGt                                                                                 <  2:813944/139‑1 (MQ=255)
                                                      cAATGTCCACCGTGTCGATGTCCATCGTTGGTGCATACATGACCATGCTGGAACCGAAATACGTCGTTGCTGCGCTGGTACTGAACATGTTCAGCACCTTTATCGTGCTGTCGCTGATCAATCCTTACCGTGTTGATGCCAGt                                                                                 <  1:1090611/143‑1 (MQ=255)
                                                       gaTGTCCACCGCGTCGATGGCCATCGTTGGTGCATACATGACCATGCTGGAACCGAAATACGTCGTTGCTGCGCTGGTACTGAACATGTTCAGCACCTTTATCGTGCTGTCGCTGATCAATCCTTACCGTGTTGATGCCAGTg                                                                                <  2:904630/142‑1 (MQ=255)
                                                         tGTCCACCGTGTCGATGTCCATCGTTGGTGCATACATGACCATGCTGGAACCGAAATACGTCGTTGCTGCGCTGGTACTGAACATGTTCAGCACCTTTATCGTGCTGTCGCTGATCAATCCTTACCGTGTTGATGCCAGTgaa                                                                              <  2:660252/143‑1 (MQ=255)
                                                              aCCGTGTCGATGTCCATCGTTGGTGCATAGATGAACAGGCTGGAACCGAAATACGTCGTTGCTGCGCTGGTACTGAACATGTTCAGCACCTTTATCGTGCTGTCGCTGATCAATCCTTACCGTGTTGATGCCAGTGAAGaaaa                                                                         <  1:601101/143‑1 (MQ=255)
                                                              aCCGTGCCGATGTCCATCGTTGGTTCATACATGACCATGCTGGAACCGAAATACGTCGTTGCTGCGCTGGTACTGAACATGTTCAGCCCCTTTATCGTGCTGTCGCTGATCAATCCTTACCGTGTTGATGCCAGTGAAGaaaa                                                                         <  1:156297/143‑1 (MQ=255)
                                                                       aTGTCCATCGTTGGTGCATACATGACCATGCTGGAACCGAGATACGTCGTTGCTGCGCTGGTACTGAACATGTTCAGCACCTTTATCGTGCTGTCGCTGATCAATCCTTACCGTGTTGATGCCAGTGAAGAAAACAt                                                                      >  2:16454/1‑137 (MQ=255)
                                                                       aTGTCCATCGTTGGTGCATACATGACCATGCTGGAACCGAGATACGTCGTTGCTGCGCTGGTACTGAACATGTTCAGCACCTTTATCGTGCTGTCGCTGATCAATCCTTACCGTGTTGATGCCAGTGAAGAAAACAt                                                                      <  1:16454/137‑1 (MQ=255)
                                                                       aTGTCCATCGTTGGTGCATACATGACCATGCTGGAACCGAAATACGTCGTTGCTGCGCTGGTACTGAACATGTTCAGCACCTTTATCGTGCTGTCGCTGATCAATCCTTACCGTGTTGATGCCGGTGAAGAAAACATCCAGAt                                                                >  2:704819/1‑143 (MQ=255)
                                                                            cATCGTTGGTGCATACATGACCATGCTGGAACCGAAATACGTCGTCGAAGCGCTGGTACTGAACATGTTCAGCACCTTTATCGTGCTGTCGCTGATCAATCCTTACCGTGTTGATGCCAGTGAAGAAAACATCCAGATGTCCa                                                           <  1:98551/143‑1 (MQ=255)
                                                                              tCGTTGGTGCATACATGACCATGCTGGAACCGAAATACGTCGTTGCTGCGCTGGTACTGAACATGTTCAGCACCTTTATCGTGCTGTCACTGATCAATCCTTACCGTGTTGATGCCAGTGAAGAAAACATCCAGATGTCCAAc                                                         <  2:478765/143‑1 (MQ=255)
                                                                                gTTGGTGCATACATGACCATGCTGGAACCGAAATACGTCGTTGCTGCGCTGGTACTGAACATGTTCAGCACCTTTATCGTGCTGTCGCTGATCAATCCTTACCGTGTTGATGCCACAGAAAAAAACATCCAGATCTCCAAccc                                                       >  2:185638/1‑142 (MQ=255)
                                                                                   ggTGCATACATGACCATGCTGGAACCGAAATACGTCGTTGCTGCGCTGGTACTGAACATGTTCAGCACCTTTATCGTGCTGTCGCTGATCAATCCTTACCGTGTTGATGCCAGTGAAGAAAACATCCAGATGTCCAACCTGCa                                                    >  2:410663/1‑143 (MQ=255)
                                                                                       cATACATGACCATGCTGGAACCGAAATACGTCGTTGCTGCGCTGGTACTGAACATGTTCAGCACCTTTATCGTGCTGTCGCTGATCAATCCTTACCGTGTTGATGCCAGTGAAGAAAACATCCAGATGTCCAACCTGCACGac                                                >  2:465457/1‑142 (MQ=255)
                                                                                          aCATGACCATGCTGGAACCGAAATACGTCGTTGCTGCGCTGGTACTGAACATGTTCAGCACCTTTATCGTGCTGTCGCTGATCAATCCTTACCGTGTTGATGCCAGTGAAGAAAACATCCAGATGTCCAACCTGCACGAAGGt                                             >  1:942068/1‑143 (MQ=255)
                                                                                          aCATGACCATGCTGGAACCGAAATACGTCGTTGCTGCGCTGGTACTGAACATGTTCAGCACCTTTATCGTGCTGACGGTGTTTAATCCTAACCGTGTTGGTGGTGGTGAAGAAAACATCCAGATGTCCAACCTGCACGAAGGt                                             >  1:42332/1‑143 (MQ=255)
                                                                                                 cATGCTGGAACCGAAATACGTCGTTGCTGCGCTGGTACTGAACATGTTCAGCACCTTTATCGTGCTGTCGCTGATCAATCCTTACCGTGTTGATGCCAGTGAAGAAAACATCCAGAGGTCCAACCTGCACGACGGTCAGCGct                                      >  1:393725/1‑143 (MQ=255)
                                                                                                  aTGCTGGAACCGAGATACGTCGTTGCTGCGCTGGTACTGAACATGTTCAGCACCTTTATCGTGCTGTCGCTGATCAATCCTTACCGTGTTGATGCCAGTGAAGAAAACATCCAGATGTCCAACCTGCACGAAGGTCAGAGctt                                     <  2:414340/143‑1 (MQ=255)
                                                                                                   tGCTGGAACCGAAATACGTCGTTGCTGCGCTGGTACTGAACATGTTCAGCACCTTTATCGTGCTGTCGCTGATCAATCCTTACCGTGTTGATGCCAGTGAAGAAAACATCCAGATGTCCAACCTGCCCGACGGGCAGAGctcc                                    >  2:428154/1‑141 (MQ=255)
                                                                                                      tGGATCCGAAATACGTCGTTGCTGCGCTGGTACTGAACATGTTCAGCACCTTTATCGTGCTGTCGCTGATCAATCCTTACCGTGTTGATGCCAGTGAAGAAAACATCCAGATGTCCAACCTGCACGAAGGTCAGAGCttcttc                                 <  1:773232/143‑1 (MQ=255)
                                                                                                         aaCCGACATACGTCGTTGCTGCGCTGGTACTGAACATGTCCAGCACCTTTATCGTGCTGTCGCTGATCAATCCTTACCGTGTTGATGCCAGTGAAGAAAACATCCAGATGTCCAACCTGCACGAAGGTCAGAGCTTCTTCGaa                              <  1:530464/143‑1 (MQ=255)
                                                                                                               agtACGTCGTTGCTGCGCTGGTACTCAACATGCTCAGCATGTTTATCGTGCTGTCGCTGATCAATCCTGACCGTGTTGATGCCAGTGAAGAAAACATCCAGATGTCCAACCTGCACGAAGGTCAGAGCTTCTTCGAAATGCTg                        <  2:707590/141‑1 (MQ=255)
                                                                                                               agtACGTCGTGGCTGCGCTGGTACTGAACATGTGCAGCACCTTTATCGTGCTGTCGCTGATCAATCCGTACCGTGTTGATGCCAGTGAAGAAAACATCCAGATGGCCAACCTGCACGAAGGTCAGAGCTTCTTCGAAATGCTg                        <  1:1087665/141‑1 (MQ=255)
                                                                                                                aTACGTCGTTGCTGCGGTGGTACTGAACATTTTCGGCACCTTTATCGAGCTGTCGCTGATCAATCCTTACCGTGTTGATGCCAGTGAAGAAAACATCCAGATGTCCAACCTGCACGAAGGTCAGAGCTTCTTCGAAATGCTgg                       <  2:975477/143‑1 (MQ=255)
                                                                                                                    gtcgtTGCTGCGCTGGTACTGAACATGTTCAGCACCTTTATCGTGCTGTCGCTGATCAATCCTTACCGTGTTGATGCCAGTGAAGAAAACATCCAGATGTCCAACCTGCACGAAGGTCAGAGCTTCTTCGAAATGCTGGGTGa                   <  1:273080/143‑1 (MQ=255)
                                                                                                                     tcgtTGCTGCGCTGGTACTGAACATGTTCAGCACCTTTATCGTGCTGTCGCTGATCAATCCTTACCGTGTTGATGCCAGTGAAGAAAACATCCAGATGTCCAACCTGCACGAAGGTCAGAGCTTCTTCGAAATGCTGGGTGaa                  >  2:133545/1‑143 (MQ=255)
                                                                                                                         tgctgcGCTGGTACTGAACATGTTCAGCACCTTTATCGTGCTGTCGCTGATCAATCCTTACCGTGTTGATGCCAGTGAAGAAAACATCCAGATGTCCAACCTGCACGAGGGTCCGAGCTTCTTCGGAATGCTGGGTGAATACa              >  1:233367/1‑143 (MQ=255)
                                                                                                                            tgcGCTGGTACTGAACATGTTCAGCACCTTTATCGTGCTGTCGCTGATCAATCCTTACCGTGTTGATGCCAGTGAAGAAAACATCCAGATGTCCAACCTGCACGAAGGTCAGAGCTTCTTCGAAATGCTGGGTGAATACATTc           >  1:495508/1‑143 (MQ=255)
                                                                                                                             gcgcTGGTACTGAACATGTTCAGCACCTTTATCGTGCTGTCGCTGATCAATCCTTACCGGGTTGATGCCAGTGAAGAAAACATCCAGATGTCCAACCTGCACGAAGGTCCGGGCTTCTTCGAAAGGCTGGGTGAATACATTCt          >  1:289654/1‑143 (MQ=255)
                                                                                                                             gcgcTGGTACTGAACATGTTCAGCACCTTTATCGTGCTGTCGCTCATCAATCCTTACCGTGTTGATGCCAGTGAAGAAAACATCCAGATGTCCAACCTGCACGAAGGTCAGAGCTTCTTCGAAATGCTGGGTGAATACATTCt          <  2:729882/143‑1 (MQ=255)
                                                                                                                                 tGGTACTGAACATGTTCAGCACCTTTATCGTGCTGTCGCTGATCAATCGTTACCGTGTAGATGCTAGTGCTGAAAACAGCCAGATGTCCAACCTGCACGAAGGTCAGAGCTTCTTCGAAATGCTGGGTGAATACATTCTGGCa      >  1:829647/1‑143 (MQ=255)
                                                                                                                                 tGGTACTGAACATGTTCAGCACCTTTATCGTGCTGTCGCTGATCAATCCTTACCGTGTTGATGCCAGTGAAGAAAACATCCAGATGTCCAACCTGCACGAAGGTCAGAGCTTCTTCGAAATGCTGGGTGAATCCATTCTAGCa      >  1:440519/1‑143 (MQ=255)
                                                                                                                                 tGGTACTGAACATGTTCAGCACCTTTATCGTGCTGTCGCTGATCAATCCTTACCGTGTTGATGCCAGTGAAGAAAACATCCAGATGTCCAACCTGCACGAAGGTCAGAGCTTCTTCGAAATGCTGGGTGAATACATTCTGGct      >  2:315804/1‑142 (MQ=255)
                                                                                                                                  ggTGCTGAACATGTTCAGTACCTTTATCGTGCTGTCGCTGATCAATCCTTACCGTGTTGATGCCAGTGAAGAAAACATCCAGATGTCCAACCTGCACGAAGGTCAGAGCTTATTCGAAATGCTGGGTGAATACAGTCTGGcgg     >  1:180994/1‑141 (MQ=255)
                                                                                                                                  ggTGCTGAACATGTTCAGTACCTTTATCGTGCTGTCGCTGATCAATCCTTACCGTGTTGATGCCAGTGAAGAAAACATACAGATGTCCAACCAGCACTAAGGTCAGAGCTTCTTCGAAATGCTGGGTGAATACATTCTGGCAg     >  2:978554/1‑143 (MQ=255)
                                                                                                                                  ggTGCTGAACATGTTCAGTACCTTTATCGTGCTGTCGCTGATCAATCCTTACCGTGTTGATGCCAATGAAGAAAACATCCAGATGTCCAACCTGCACGACGGTCAGAGCTTCTTCGAAATGCTGGGTGAATACGTGCTGGCAg     >  1:1127993/1‑143 (MQ=255)
                                                                                                                                  ggTACTGACCATGTTCAGCACCTTTATCGTGCTGTCGCTGATCAATCCTTACCGTGTTGATGCCAGTGAAGAAAACATCCAGATGTCCAACCTGCACGAAGGTCAGAGCTTCTTCGAAATGCTGGGTGAATACATTCTGGCAg     <  2:816663/143‑1 (MQ=255)
                                                                                                                                     aCTGAACATGTTCAGCACCTTTAGCGTGCTGTCGCTGATCAAGCCTTACCGTGTTGATGCCAGTGAAGAAAACATCCAGATGTCCAACCTGCACGAAGGTCAGAGCTTCTTCGAAATGCTGGGTGAATACATTCTGGCAGGtt  <  2:1050335/143‑1 (MQ=255)
                                                                                                                                     |                                                                                                                                              
AAGATATCCTCGGCAAAATCTCCCGTAATCGTATGTACACCATGGCTGCCACGGCAATGTCCACCGTGTCGATGTCCATCGTTGGTGCATACATGACCATGCTGGAACCGAAATACGTCGTTGCTGCGCTGGTACTGAACATGTTCAGCACCTTTATCGTGCTGTCGCTGATCAATCCTTACCGTGTTGATGCCAGTGAAGAAAACATCCAGATGTCCAACCTGCACGAAGGTCAGAGCTTCTTCGAAATGCTGGGTGAATACATTCTGGCAGGTT  >  NC_000913/2513505‑2513780

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: