Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 2,866,488 G→C 5.4% intergenic (+23/+71) ygbN → / ← rpoS putative transporter YgbN/RNA polymerase, sigma S (sigma 38) factor

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,866,4880GC 5.4% 202.9 / 4.9 75intergenic (+23/+71)ygbN/rpoSputative transporter YgbN/RNA polymerase, sigma S (sigma 38) factor
Reads supporting (aligned to +/- strand):  ref base G (32/39);  new base C (2/2);  total (34/41)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.95e-01

TTGTGACCAAATATCTGGGGTTGTCGGTAGCAGACGGTCTGAAAACCTGGACAGTGTTAACGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGTAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTC  >  NC_000913/2866347‑2866630
                                                                                                                                             |                                                                                                                                              
ttGTGACCAAATATCTGGGGTTGTCGGTAGCAGACGGTCTGAAAACCTGGACAGTGTTAACGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGTGATTTGACCTTAATAAAAAGGTCCGATGGGc                                                                                                                                               >  1:1038854/1‑143 (MQ=255)
    gACCAAATATCTGGGGTTGTCGGTAGCAGACGGTCTGAAAACCTGGACAGTGTTAACGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGTAATTTGACCTTAATAAAAAGGTCCGATGGGCATCg                                                                                                                                           <  1:1004224/143‑1 (MQ=255)
      ccAAATATCTGGGGTTGTCGGTAGCAGACGGTCTGAAAACCTGGACAGTGTTAACGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGTAATTTGACCTTGATAAAAAGGTCCGATGGGCATCGGa                                                                                                                                         >  1:182555/1‑143 (MQ=255)
      ccAAATATCTGGGGTTGTCGGTAGCAGACGGTCTGAAAACCTGGACAGTGTTAACGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGTAATTTGACCTTAATAAAAAGGGCCGATGGGCAGCggt                                                                                                                                         >  2:1074272/1‑142 (MQ=255)
       cAAATATCTGGGGTTGTCGGTAGCAGACGGTCTGAAAACCTGGACAGTGTTAACGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGTAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGAc                                                                                                                                        >  1:750544/1‑143 (MQ=255)
       cAAATATCTGGGGTTGTCGGTAGCAGACGGTCTGAAAACCTGGACAGTGTTAACGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGTAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGAc                                                                                                                                        >  2:132197/1‑143 (MQ=255)
       cAAATATCTGGGGTTGTCGGTAGCAGACGGTCTGAAAACCTGGACAGTGTTAACGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGTAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGAc                                                                                                                                        <  1:312145/143‑1 (MQ=255)
        aaaTATCTGGGGTTGTCGGTAGCAGACGGTCTGAAAACCTGGACAGTGTTAACGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGTAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGAcc                                                                                                                                       >  1:1280/1‑143 (MQ=255)
           tgtCTGGGGTGTTCGGTAGCAGACGGTCTGAATACCTGGACAGTGTTAACGACCATTCTCGGTTTTACCGCATTCTTAATTACCTGGTGCGTATGGGCGGTAATTTGACCTTAATAAAAAGGTCCGATGCCCCTCGGACCttt                                                                                                                                    <  1:987545/141‑1 (MQ=255)
           tatCTGGGGTTGTCGGTAGCAGACGGTCTGAAAACCTGGACAGTGTTAACGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGTAATTTGACCTTAATAAAAAGGTCCGATGCCCATCGGACCttt                                                                                                                                    <  1:966509/143‑1 (MQ=255)
             tCTGGGGTTGTCGGTAGCAGACGGTCTGAAAACCTGGACAGTGTTAACGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGTAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCttttc                                                                                                                                  >  2:845779/1‑142 (MQ=255)
             tCTGGGGTTGGCGTTAGCAGACGGTCCGACAACCTGGACACTGTTAACGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGTAATTTGACCTTAATAAAAAGGTTCGATGGGCATCGGACCTTTTa                                                                                                                                  <  1:397333/143‑1 (MQ=255)
               cggggTTGTCGGGAGCAGACGGCCTGAAAAGCTGGACAGTGTTAACGACCATGTGAGGGTATACCGAATTCTTAATGACCTGGTGCGTATGGGCGGTAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTAtt                                                                                                                                <  1:520184/142‑1 (MQ=255)
                    ttGTCGGTAGCAGACGGTCTGAAAACCTGGACAGTGTTAACGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGTAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTTca                                                                                                                           <  2:293907/143‑1 (MQ=255)
                              cggACGGTCTGGAAACCTGGACAGGGTTAACGAGCAGTCTCGGGTTTACCGGATTCTTAATTACCTGGGGCTTATTGCCGGTAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGc                                                                                                                 <  2:682309/141‑1 (MQ=255)
                               aGACGGTCTGAAAACCTGGACAGTGTTAACGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGCCGGTCATTTGACCTTAATAAAAGGGTCCGATGGGCATCGCCCCTCTTCTTGTGCACGGAAGAGccc                                                                                                                >  2:369833/1‑143 (MQ=255)
                                gACGGTCTGAAAACCTGGACAGTGTTAACGACCATTCTCGGGTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGTAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCa                                                                                                               <  2:804843/143‑1 (MQ=255)
                                      cTGAAAACCTGGACAGTGTTAACGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGTAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCg                                                                                                         <  2:606779/143‑1 (MQ=255)
                                       tGAAAACCTGGACAGTGTTAACGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGTACTTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGc                                                                                                        >  2:107654/1‑143 (MQ=255)
                                         aaaaCCTGGACAGTGTTAACGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGTAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTGTATTGTGCACAGAAAAGGCCAGCCTCGcct                                                                                                      >  2:724809/1‑141 (MQ=255)
                                             ccTGGACAGTGTTAACGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGTAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTgaga                                                                                                  <  2:728970/143‑1 (MQ=255)
                                                 gACGGTGTTAACGGCCACTCTCGGTTGTACCGGATTCTTAGTTGCCTGGTGCGTATGGGCGGTAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTgg                                                                                              <  2:879419/143‑1 (MQ=255)
                                                  aCAGTGTTAACGACCATTCTCGGTTTTACAGGCTATATTTGAATCGAGTGCGTATGGGCGCTAATGCTACCTTAATAAAAATGACCGATCGGCAGCGGACCTTTTATTTGGCACAGAAAATGCCAGCCTCGCTCGAGACTgcc                                                                                             >  2:986656/1‑141 (MQ=255)
                                                      tgtTAACGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGTAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCttt                                                                                         >  1:1050710/1‑143 (MQ=255)
                                                      tgtTAACGACCAGTCTCGGTCTTACCCCATTCTTAATTACCTGGTGCGTATGGGCGGTAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCttt                                                                                         <  1:301746/143‑1 (MQ=255)
                                                        ttgaCGACCATTCTCGGGGTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGTAATTTGACCTTGATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCt                                                                                       <  2:189287/140‑1 (MQ=255)
                                                          aaCGACCAGTCTCGGATTTCCCCGATTCTTAATTACCTGGTGCGCATGGGCGGTAATTTGTCCATTATAACTTGGTCCGATGGGCATCGGACCTTTTATTGAGCTTTCGTTATGCCATCCTCCCTTGAGACTGGCCTTTCTGa                                                                                     <  2:552783/143‑1 (MQ=255)
                                                                gaTTCTCGGTTGTGCCGGGTTCGTAATTGCCTCGGGTGGATGGGCGGTAATTTGACCTTAATAAAGAGGTCCGATGGGCATCGGGCCTTTTATTGGGCTCAGAAAAGGCCGGCCTCGCTTGAGACTGGCCTTTCTGACAGATg                                                                               <  2:462522/142‑1 (MQ=255)
                                                                  ttCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGTAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGcc                                                                             >  1:940076/1‑142 (MQ=255)
                                                                     tcGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGTAATTTGACCTTAATAAAAATGTCCGATGCGCATCGGACCATTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTCCTCACAGATGcctac                                                                          >  2:285141/1‑143 (MQ=255)
                                                                        gtttgtccGTATTCTTAATTACCTGGTGCGTATGGGCGGTAATTTGACCTTAATAAAAAGTTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGcttactta                                                                       <  2:1087500/137‑1 (MQ=255)
                                                                             aCCGGATTCTTAATTACCTGGTGCGTATGGGCGGTAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTcgc                                                                  <  2:1078677/143‑1 (MQ=255)
                                                                              ccGGATTCTTAATTACCTGGTGCGTATGGGCGGTAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTcgcg                                                                 <  2:750544/143‑1 (MQ=255)
                                                                               cGGATTCTTAATTACCTGGTGCGTATGGGCGGTAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCgg                                                                <  1:676092/143‑1 (MQ=255)
                                                                               cGGATTCTTAATTACCTGGTGCGTATGGGCGGTAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTATTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACCTACTCGCgg                                                                >  2:581319/1‑143 (MQ=255)
                                                                                 gATTCTTAATTACCTGGTGCGTATGGGCGGTAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGaa                                                              >  2:31662/1‑143 (MQ=255)
                                                                                   ttCGTAATGACGTGGTGCGTAGGGGCGGTAATTTGACCTTAATAAAACGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACa                                                            <  1:2997/143‑1 (MQ=255)
                                                                                     cTTCATGACCGGGTGCGTATGGGCGGTAGTTTGACCTTAATAAGAACGTAACCAATGCTGCTGTTGTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAgc                                                          <  1:825051/143‑1 (MQ=255)
                                                                                     cTTAATTACCTGGTGCGTATGGGCGGTAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAgc                                                          >  1:706103/1‑143 (MQ=255)
                                                                                        aaTTACCTGGTGCTTAGGGGCGGTAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACCGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCt                                                       <  1:1056030/143‑1 (MQ=255)
                                                                                         aTTGCCTGGTGCGTATGGGCGGTAATTTGACCTTAATACAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCtt                                                      <  1:185703/143‑1 (MQ=255)
                                                                                          ttACCTGGTGCGTATGGGCGGTAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTc                                                     <  1:1038087/143‑1 (MQ=255)
                                                                                          ttACCTGGTGCGTATGGGCGGTAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTc                                                     >  2:1131641/1‑143 (MQ=255)
                                                                                                tgTGCGTATGGGCGGTAATTTGACCTTAAGAAAAAGGTCCGATGGGCATCGGACCTGTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGGTTCGATAtt                                               <  2:716879/142‑1 (MQ=255)
                                                                                                ggTGTGTATGGGCGGTAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAGCAGCGCTTCGATAtt                                               >  1:7470/1‑143 (MQ=255)
                                                                                                 gTGCGTATGGGCGGTAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTc                                              <  2:1050710/143‑1 (MQ=255)
                                                                                                  ggCGTATGGGCGGTAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCa                                             <  1:503221/142‑1 (MQ=255)
                                                                                                   gCGTATGGGCGGTAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATTCTTACTTACTCGCGGAACAGCGCTTCGATATTCAg                                            <  2:61649/143‑1 (MQ=255)
                                                                                                    cgtgggggTGGTAAGTGGACCTTAGTGAGAAGGTCCGATGGGCATCGGACCGTTTATTGGGCACAGAAAAGGCCAGCCTCGCTTGGGACTGGCCTGTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGc                                           <  2:1049761/138‑1 (MQ=255)
                                                                                                        tGGGCGGTAATTTGCCCTTCGTCAACAGGTCCTATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCCt                                       <  2:936171/143‑1 (MQ=255)
                                                                                                            tggTGATTTGATCTTAAGAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCATAGAAAAGGCCAGCCGCGCGTGAGACTGGCCTTTCGGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCCTGCGt                                   <  2:499368/142‑1 (MQ=255)
                                                                                                            cGGTAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATGTTCAGCCCCTGCGt                                   >  2:880028/1‑143 (MQ=255)
                                                                                                              gTAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCCTGCGttt                                 >  1:799664/1‑143 (MQ=255)
                                                                                                              gTAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTGTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGCCCGATGCTTACTTCCTCGCGGAACAGCGCTTCGTTCTTCAGCCCCTGCGttt                                 >  1:313976/1‑143 (MQ=255)
                                                                                                                 aTTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCCTGCGTTTGCa                              <  1:346969/143‑1 (MQ=255)
                                                                                                                 aTTTGACCTTAACAAAAAGGTCCGATGGGCATCGGCCCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCCTGCGTTTGCa                              <  1:343854/143‑1 (MQ=255)
                                                                                                                   ttGACCTTAATAAAAAGGTCCGATGGGCATCGTACCGTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACGGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCCTGCGTTTGCAgg                            >  2:687222/1‑143 (MQ=255)
                                                                                                                    tGACCTTAATAAAAAGGTCCGATGGGCATCTGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCCTGCGTTTGCAGGa                           <  1:668173/143‑1 (MQ=255)
                                                                                                                        cTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGCTATTCAGCCCCTGCGGTTGCAGGAttcc                       >  2:323955/1‑141 (MQ=255)
                                                                                                                        cTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGACATTCAGCCCCTGCGCCTGCAGGATTTc                       >  2:377021/1‑143 (MQ=255)
                                                                                                                         ttAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCCTGCGTTTGCAGGATTTcg                      >  2:317591/1‑143 (MQ=255)
                                                                                                                          taataaAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCCTGCGTTTGCAGGATCTcgc                     >  2:1077020/1‑143 (MQ=255)
                                                                                                                          acaataaaaGGTCCGATGCCCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCCTGCGTTTGCAGGATTTcgc                     >  1:751930/6‑143 (MQ=255)
                                                                                                                                aaaCGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCGTGAGACTTGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCCTGCGTTTGCAGGATTTCGCGCAAAc               <  2:193657/143‑1 (MQ=255)
                                                                                                                                     tCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACCGATGCGTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCCTGCGTTTGCAGGATTTCGCGCAAACGgcgc          >  1:839918/1‑143 (MQ=255)
                                                                                                                                     tCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGctta                                                                           >  1:203862/1‑78 (MQ=255)
                                                                                                                                     tCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGctta                                                                           <  2:203862/78‑1 (MQ=255)
                                                                                                                                     tCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCCTGCGTTTGCAGGATTTCGCGCAAACGgcgc          <  1:132197/143‑1 (MQ=255)
                                                                                                                                     tCCGATGCCCATCGGACCTTTTATTGTGCACAGAACAGGCCAGACTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCCTGCGTTTGCAGGATTTCGCGCAAACGgcgc          >  2:344585/1‑143 (MQ=255)
                                                                                                                                      ccGATGGGCGTCGGCCCTTGTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCa         <  1:1074272/143‑1 (MQ=255)
                                                                                                                                        gctGGGCAGCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAgg       <  2:408600/141‑1 (MQ=255)
                                                                                                                                        gATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCGGACCAGCCGTTTGTAGGATTTCGCGCAACCCGCGCAgg       >  1:876997/1‑143 (MQ=255)
                                                                                                                                         aTGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGc      >  1:228879/1‑143 (MQ=255)
                                                                                                                                         aTGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGc      >  2:925788/1‑143 (MQ=255)
                                                                                                                                         aTGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGc      <  1:725480/143‑1 (MQ=255)
                                                                                                                                            ggCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGTCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCCTGCGCTTGCAGGATTTCGCGCCAACGGCGCAGGccct   >  2:709184/1‑141 (MQ=255)
                                                                                                                                             gCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCCTGCGTGTGCAGGATCTCGCGCAAACTGCGCAGGCCttg  >  2:599092/1‑142 (MQ=255)
                                                                                                                                             |                                                                                                                                              
TTGTGACCAAATATCTGGGGTTGTCGGTAGCAGACGGTCTGAAAACCTGGACAGTGTTAACGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGTAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTC  >  NC_000913/2866347‑2866630

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: