| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 459,834 | C→A | 100% | A316E (GCG→GAG) | lon → | Lon protease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 459,834 | 0 | C | A | 99.3% | 201.2 / ‑6.5 | 70 | A316E (GCG→GAG) | lon | Lon protease |
| Reads supporting (aligned to +/- strand): ref base C (0/1); new base A (36/33); total (36/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.86e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.42e-01 | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
AAAGCGGAAGCAGAGTTGCAGAAGCTGAAAATGATGTCTCCGATGTCGGCAGAAGCGACCGTAGTGCGTGGTTATATCGACTGGATGGTACAGGTGCCGTGGAATGCGCGTAGCAAGGTCAAAAAAGACCTGCGTCAGGCGCAGGAAATCCTTGATACCGACCATTATGGTCTGGAGCGCGTGAAAGATCGAATCCTTGAGTATCTTGCGGTTCAAAGCCGTGTCAACAAAATCAAGGGACCGATCCTCTGCCTGGTAGGGCCGCCGGGGGTAGG > NC_000913/459695‑459969 | aaaGCGGAAGCAGAGGTGCAGAAGCTGAAAATGATGTCTCCGATGTCGGCAGAAGCGACCGTAGTGCGTGGTTATATCGACTGGATGGTACAGGTGCCGTGGAATGCGCGTAGCAAGGTCAAAAAAGACCTGCGTCAGGAGCa < 1:674811/143‑1 (MQ=255) cGGAAGCAGAGTTGCAGAAGCTGAAAATGATGTCTCCGATGTCGGCAGAAGCGACCGTAGTGCGTGGTTATATCGACTGGATGGTACAGGTGCCGTGGAATGCGCGTAGCAAGGGCAGAAAAGACCGGCGTCAGGAGCAAGac > 1:692998/1‑142 (MQ=255) cGGAAGCAGAGTTGCAGAAGCTGAAAATGATGTCTCCGATGTCGGCAGAAGCGACCGTAGTGCGTGGGTATAACGACGGGATGGTAGAGGTGACGAGGAATGCGCGTAGCAACGACAAAAAAGACACGCGTCAGGAGCAGGac > 1:407054/1‑142 (MQ=255) cGGAAGCAAAGTTGCAGAAGCTGAAAAGGAGGGCTCCGATGTCGGCAGAAGCGACCGTAGTGCGTGGTTATATCGACTGGATGGTACAGGTGCCGTGGAATGCGCGTAGCAAGGTCAAAAAAGACCTGCGTCAGGAGCAGGaa < 2:229779/143‑1 (MQ=255) aaGCAGAGTTGCAGAAGCTGAAAATGATGTCTCCGATGTCGGCAGAAGCGACCGTAGTGCGTGGTTATATCGACTGGATGGTACAGGTGCCGTGGAATGCGCGTAGCAAGGTCAAAAAAGACCTGCGTCCGGAGCAGGACATc > 1:1055175/1‑143 (MQ=255) aGCAGAGTTGCATAAGCTGAAAATGGTGGCTCCGGTGGCGGCAGAAGCGGCCGGAGTGGGTGGTTATATCGACTTGATTGTACAGGTGCCGTGGAATGCGCGTAGCAAGGTCAAAAAAGACCTGCTCCTGACGCAggtctttt < 2:887230/143‑7 (MQ=255) gagagTTGCAGAAGCTGAAAATGATGTCTCCGATGTCGGCAGAAGATACCGTAGTGCGTGGTTATATCGACTGGATGGTACAGGTGCCGTGGAATGCGCGTAGCAAGGTCAAAAAAGACCTGCGTCAGGAGCAGGAAATCCtt < 1:976912/142‑1 (MQ=255) ttGCAGAAGCTGAAAATGATGTCTCCGATGTCGGCAGAAGCGACCGTAGTGCGTGGTTATATCGACTGGATGGTACAGGTGCCGTGGAATGCGCGTAGCAAGGTCAAAAAAGACCTGCGTCAGGAGCAGGAAATCCTTGATAc > 2:477131/1‑143 (MQ=255) aGAAGCTGAAAATGATGTCTCCGATGTCGGCAGAAGCGACCGTAGTGCGTGGTTATATCGACTGGATGGTACAGGTGCCGTGGAATGCGCGTAGCAAGGTCAAAAAAGACCTGCGTCAGGAGCAGGAAATCCt > 2:677642/1‑133 (MQ=255) aGAAGCTGAAAATGATGTCTCCGATGTCGGCAGAAGCGACCGTAGTGCGTGGTTATATCGACTGGATGGTACAGGTGCCGTGGAATGCGCGTAGCAAGGTCAAAAAAGACCTGCGTCAGGAGCAGGAAATCCt < 1:677642/133‑1 (MQ=255) gAAGATGATGTCCTCGATGTCGGCAGAAGCGCCCGTAGTGCGTGGTTATATCGACTGGATGGTACAGGTGCCGTGGAATGCGCGTAGCAAGGTCAAAAAAGACCTGCGTCAGGAGCAGGAAATCCTTGATACCGACCATTATg < 1:839916/143‑1 (MQ=255) gAAAATGATGTCTCCGATGTCGGCAGAAGCGACCGTAGTGCGTGGTTATATCGACTGGATGGTACAGGTGCCGTGGAATGCGCGTAGCAAGGTCAAAAAAGACCTGCGTCAGGAGCAGGAAATCCTTGATACCGACCATTATg < 1:578810/143‑1 (MQ=255) aaaaTGATGTCTCCGATGTCGGCAGAAGCGACCGTAGTGCGTGGTTATATCGACTGGATGGTACAGGTGCCGTGGAATGCGCGTAGCAAGGTCAAAAAAGACCTGCGTCAGGAGCAGGAAATCCTTGATACCGACCATTATgg > 2:416431/1‑143 (MQ=255) tgatgTCTCCGATGTCGGCAGAAGCGACCGTAGTGCGTGGTTATATCGACTGGATGGTACAGGTGCCGTGGAATGCGCGTAGCAAGGTCAAAAAAGACCTGCGTCAGGAGCAGGAAATCCTTGGTACCGACCATTATGGTCTg > 1:701316/1‑143 (MQ=255) tgatgTCTCCGATGTCGGCAGAAGCGACCGTAGTGCGTGGTTATATCGACTGGATGGTACAGGTGCCGTGGAATGCGCGTAGCAAGGTCAAAAAAGACCTGCGTCAGGAGCAGGAAATCCTTGATACCGACCATTATGGTCTg < 1:595792/143‑1 (MQ=255) tgTCTCCGATGTCGGCAGAAGCGACCGTAGTGCGTGGTTATATCGACTGGATGGTACAGGTGCCGTGGAATGCGCGTAGCAAGGTCAAAAAAGACCTGCGTCAGGAGCAGGAAATCCTTGATACCGACCATTATGGTCTGGAg < 2:395572/143‑1 (MQ=255) tcCGATGTCGGCAGAAGCGACCGTAGTGCGTGGTTATATCGACTGGATGGTACAGGTGCCGTGGAATGCGCGTAGCAAGGTCAAAAAAGACCTGCGTCAGGAGCAGGAAATCCTTGATACCGACCATTATGGTCTGGAGcgcg > 1:281221/1‑143 (MQ=255) tCGGCAGAAGCGACCGTAGTGCGTGGTTATATCGACTGGATGGTACAGGTGCCGTGGAATGCGCGTAGCAAGGTCAAAAAAGACCTGCGTCAGGAGCAGGAAATCCTTGATACCGACCATTATGGTCTGGAGCGCGTGAAGGa > 1:281622/1‑143 (MQ=255) tCGGCAGAAGCGACCGTAGTGCGTGGTTATATCGACAGGATGGTACAGGTGCCGTGGAATGCGCGTAGCAAGGTCAAAAAAGACCTGCGTCAGGAGCAGGAAATCCTTGATACCGACCATTATGGTCTGGAGCGCGTGAAAGa > 1:728036/1‑143 (MQ=255) tCGGCAGAAGCGACCGTAGTGCGGGGTTATATCGACTGGATGGTACAGGTGCCGTGGAATGCGCGTAGCAAGGTCAAAAAAGACCTGCGTCAGGAGCAGGAAATCCTTGCTACCGCCCATTGTGGTCCGGAGCGCGTGAAAGa > 1:233729/1‑143 (MQ=255) ggCCGAAGCGACCTGAGTGCGTTGTTGTATCGGCTGGATGGTACAGGTGCCGTGGAATGCGCGTAGCAAGGTCAAAAAAGACCTGCGTCAGGAGCAGGAAATCCTTGATACCGACCATTATGGTCTGGAGCGCGTGAAAGATc < 2:937539/143‑1 (MQ=255) ggCAGAAGCGACCGTAGTGCGTGGTTATATCGACTGGATGGTACAGGTGCCGTGGAATGCGCGTAGCAAGGTCAAAAAAGACCTGCGTCAGGAGCAGGAAATCCTTGATACCGACCATTATGGTCTGGAGCGCGTGAAAGATc < 1:1045516/143‑1 (MQ=255) aaGCGACCGTAGTGCGTGGTTATAGCGACTGGATGGTACAGGTGCCGTGGAATGCGCGTAGCAAGGTCAAAAAAGACCTGCGTCAGGAGCAGGAAATCCTTGATACCGACCATTATGGTCTGGAGCGCGTGAAAGATCGAATc < 1:843664/143‑1 (MQ=255) aGCGACCGTAGTGCGTGGTTATATCGACTGGATGGTACAGGTGCCGTGGAATGCGCGTAGCAAGGTCAAAAAAGACCTGCGTCAGGAGCAGGAAATCCTTGATACCGACCATTATGGTCTGGAGCGCGTGAAAGATCGAATcc < 2:896732/143‑1 (MQ=255) aGCGACCGTAGTGCGTGGTTATATCGACTGGATGGTACAGGTGCCGTGGAATGCGCGTAGCAAGGTCAAAAAAGACCTGCGTCAGGAGCAGGAAATCCTTGATACCGACCATTATGGTCTGGAGCGCGTGAAAGATCGAATcc > 1:388292/1‑143 (MQ=255) gccGTAGTGCGGTGTTATAGCGAATGGACGGTACAGGTGCCGTGGAATGCGCGTAGCAAGGTCAAAAAAGACCTGCGTCAGGAGCAGGAAATCCTTGATACCGACCATTATGGTCTGGAGCGCGTGAAAGATCGAATCCTTGa < 2:868140/142‑1 (MQ=255) attGCGTGGTTATATCGACTGGATGGTACAGGTGCCGTGGAATGCGCGTAGCAAGGTCAAAAAAGACCTGCGTCAGGAGCAGGAAATCCTTGATACCGACCATTATGGTCTGGAGCGCGTGAAAGATCGAATCCTTGAGTATc < 1:1133533/141‑1 (MQ=255) tGCGTGGTTATATCGACTGGATGGTACAGGTGCCGTGGAATGCGCGTAGCAAGGTCAAAAAAGACCTGCGTCAGGAGCAGGAAATCCTTGATACCGACCATTATGGTCTGGAGCGCGTGAAAGATCGAATCCTTGAGTATCtt > 1:540204/1‑143 (MQ=255) gCGTGGTTATATCGACTGGATGGTACAGGTGCCGTGGAATGCGCGTAGCAAGGTCAAAAAAGACCTGCGTCAGGAGCAGGAAATCCTTGATACCGACCATTACGGTCTGGAGCGCGCGAACGAGCGCATCCTTGAgcctactg > 2:371851/1‑136 (MQ=255) cGTGGTTATATCGACTGGATGGTACAGGTGCCGTGGAATGCGCGTAGCAAGGTCAAAAAAGACCTGCGTCAGGAGCAGGAAATCCTTGATACCGACCATTATGGTCTGGAGCGCGTGAAAGATCGAATCCTTGAGTATCTTGc > 1:604005/1‑143 (MQ=255) cGTGGTTATATCGACTGGATGGTACAGGTGCCGTGGAATGCGCGTAGCAAGGTCAAAAAAGACCTGCGTCAGGAGCAGGAAATCCTTGATACCGACCATTATGGTCTGGAGCGCGGGAAAGCTCGCATCCTCGAGTATCTTGc > 1:831853/1‑143 (MQ=255) gTGGTTATATCGACTGGATGGTACAGGTGCCGTGGAATGCGCGTAGCAAGGTCAAAAAAGACCTGCGTCAGGAGCAGGAAATCCTTGATACCGACCATTATGGTCTGGAGCGCGTGAAAGATCGAATCCTTGAGTATCTTGCg < 1:532653/143‑1 (MQ=255) tGGTTATATCGACTGGATGGTACAGGTGCCGTGGAATGCGCGTAGCAAGGTCAAAAAAGACCTGCGTCAGGAGCAGGAAATCCTTGATACCGACCATTATGGTCTGGAGCGCGTGAAAGATCGAATCCTTGAGTATCTTGCgg < 1:477131/143‑1 (MQ=255) ttATATGGACTGGATGGTACAGGTGCCGTGGAATGCGCGTAGCAAGGTCAAAAAAGACCTGCGTCAGGAGCAGGAAATCCTTGATACCGACCCTTATGGTCTGGAGCGCGTGAAAGATCGAATCCTTGAGTATCTTGCGGTTc < 1:390868/143‑1 (MQ=255) gatCGACTGTAGTGTACAGGGGCCGTGAAATGGGCTTACCAAGGTCAAAAAAGACCTGCGTTAGGAGCAGGAATGCCTTGATACCGACTATTATGGTCTGGAGCGCGTGAAAGATCGAATCCTTGAGTATCTTGCGGTTCaaa < 2:434144/142‑1 (MQ=255) tCGACTGGATGGTACAGGTGCCGTGGAATGCGCGTAGCAAGGTCAAAAAAGACCTGCGTCAGGAGCAGGAAATCCTTGATACCGACCATTATGGTCTGGCGCGCGTGAAAGATCGAATCCTTGAGTATCTTGCGGATAAAAGc > 1:804119/1‑143 (MQ=255) aCTGGATGGTACAGGTGCCGTGGAATGCGCGTAGCAAGGTCAAAAAAGACCTGCGTCAGGAGCAGGAAATCCTTGATACCGACCATTATGGTCTGGAGCGCGTGAAAGATCGAATCCTTGAGTATCTTGCGGTTCAAAGCCgt > 1:1113149/1‑143 (MQ=255) ggATGGTACGGGTGGGGGGGAAGGCGCGGAGCGAGGTCAAAAAAGACCTGCGTCAGGAGCAGGAGATCCTGGATACCGACCATTATGGTCTGGAGCGCGTGAAAGATCGAAGCCTTGAGTATCTTGCGGTTCAAAGCCGTGTc < 2:260464/143‑1 (MQ=255) gATGGTACAGGTGCCGTGGAATGCGCGTAGCAAGGTCAAAAAAGACCTGCGTCAGGAGCAGGAAATCCTTGATACCGACCATTATGGTCTGGAGCGCGTGAAAGATCGAATCCTTGAGTATCTTGCGGTTCAAAGCCGTGTca < 1:999190/143‑1 (MQ=255) gTACAGGTGCCGGGGAATGCGCGTAGCAAGGTCAAAAAAGACCTGCGTCAGGAGCAGGAAATCCTTGATACCGACCATTATGGTCTGGAGCGCGTGAAAGATCGAATCCTTGAGTATCTTGCGGTTCAAAGCCGTGTcaacaa < 2:426917/143‑1 (MQ=255) tACAGGTGCCGTGGAATGCGCGTAGCAAGGTCAAAAAAGACCTGCGTCAGGAGCAGGAAATCCTTGATACCGACCATTATGGTCTGGAGCGCGTGAAAGATCGAATCCTTGAGTATCTTGCGGTTCAAAGCCGTGTCAACaaa > 1:716747/1‑143 (MQ=255) tACAGGTGCCGTGGAATGCGCGTAGCAAGGTCAAAAAAGACCTGCGTCAGGAGCAGGAAATCCTTGATACCGACCATTATGGTCTGGAGCGCGTGAAAGATCGAATCCTTGAGTATCTTGCGGTTCAAAGCCGTGTCAACaaa < 1:416431/143‑1 (MQ=255) cAGGTGCCGTGGAATGCGCGTAGCAAGGTCAAAAAAGACCTGCGTCAGGAGCAGGAAATCCTTGCTACCGACCATTATGGTCTGGAGCGCGTGAAAGATCGAATCCGTGAGTATCTTGCGGTTCAAAGCCGTGTCAACAAAAt > 1:61945/1‑143 (MQ=255) ggCCGTGGAATGCGCGTAGCAAGGTCAAAAAAGACCTGCGTCAGGAGCAGGAAATCCTTGATACCGACCATTATGGTCTGGAGCGCGTGAAAGATCGAATCCTTGAGTATCTTGCGGTTCAAAGCCGTGTCAACAAAATCAAg < 2:944424/142‑1 (MQ=255) gTGGAATGCGCGTAGCAAGGTCAAAAAAGACCAGCGTCAGGAGCAGGAAATCCTTGATACCGGCCATTATGGTCTGGAGCGCGTGAAAGATCGAATCCTTGAGTCTCTTGCGGTTCCCAGCCGTGTCAACCAAATCAAAGGAc > 1:889589/1‑143 (MQ=255) aTGCGCGTAGCAAGGTCAAAAAAGACCTGCGTCAGGAGCAGGAAATCCTTGATACCGACCATTATGGTCTGGAGCGCGAGAAAGATCGAATCCTTGAGTATCTTGCGGTTCAACGCCGTGTCAACAAAATCAAGGGACCGATc > 2:410020/1‑143 (MQ=255) cgcgTAGCAAGGTCAAAAAAGACCTGCGTCAGGAGCAGGAAATCCTTGATACCGACCATTATGGTCTGGAGAGCGTGAAAGATCGAATCCTTGAGTATCTTGCGGTTCAAAGCCGTGTCAACAAAATCAAGGGACCGATCctc > 2:727409/1‑143 (MQ=255) ttaccAAGGTTAAAATATACCTGCGTTAGGAACAGTAAATCCTTTTTACCTATTATTATTGTCTAGAGCGCGGGAAAGAACGAAACCGTGAGTATCTTGCGGTTCAAAGCCGTGTCAACAAAATCAAGGGACCGATCCTCTGc < 1:657808/139‑1 (MQ=255) aGCAAGGTGAAGAAAGACCTGCGTCAGGAGCAGGAAATCCTTGATACCGACCATTATGGTCTGGAGCGCGTGAAAGATCGAATCCTTGAGTATCTTGCGGTTCAAAGCCGTGTCAACAAAATCAAGGGACCGATCCTCTGCCt < 1:921402/143‑1 (MQ=255) gCAAGGTCAAAAAAGGCCTGCGTCAGGAGCAGGAAATCCTTGATACCGACCATTATGGTCTGGAGCGCGTGAAAGATCGAATCCTTGAGTATCTTGCGGTTCAAAGCCGTGTCAACAAAATCAAGGGACCGATCCTCTGCCTg < 1:1081043/143‑1 (MQ=255) gCAAGGTCAAAAAAGACCTGCGTCAGGAGCAGGAAATCCTTGGTACCGACCATTATGGTCTGGAGCGCGTGAAAGATCGAATCCTTGAGTATCTTGCGGTTCAAAGCCGTGTCAACAAAATCAAGGGACCGATCCTCTGCCTg < 2:701316/143‑1 (MQ=255) cAAGGTCAAAAAAGACCTGCGTCAGGAGCAGGAAATCCTTGATACCGACCATTATGGTCTGGAGCGCGTGAAAGATCGAATCCTTGAGTATCTTGCGGTTCAAAGCCGTGTCAACCAAATCAAGGGACCGACCCCATGCCCgg > 2:910747/1‑143 (MQ=255) cAAGGTCAAAAAAGACCTGCGTCAGGAGCAGGAAATCCTTGATACCGACCATTATGGTCTGGAGCGCGTGAAAGATCGAATCCTTGAGTATCTTGCGGTTCAAAGCCGTGTCAACAAAATCAAGGGACCGATCCTCTGCCTgg > 1:92148/1‑143 (MQ=255) cAAGGTCAAAAAAGACCTGCGTCAGGAGCAGGAAATCCTTGATACCGACCATTATGGTCTGGAGCGCGTGAAAGATCGAATCCTTGAGTATCTTGCGGTTCAAAGCCGTGTCAACAAAATCAAGGGACCGATCCTCTGCCTgg > 1:241793/1‑143 (MQ=255) atCAAAAAAGACCTGCGTCAGGAGCAGGAAATCCTTGATACCGACCATTATGGTCTGGAGCGCGTGAAAGATCGAATCCTTGAGTATCTTGCGGTTCAAAGCCGTGTCAACAAAATCAAGGGACCGATCCTCTGCCTGGTAgg < 1:870215/142‑1 (MQ=255) tCAAAAAAGACCTGCGTCAGGAGCAGGAAATCCGTGATACCGACCATTATGGTCTGGAGCGCGTGAAAGATCGAATCCTTGAGTATCTTGCGGTTCAAAGCCGTGTCAACAAAATCAAGGGACCGATCCTCTGCCTGGTAggg < 2:585411/143‑1 (MQ=255) cAAAAAAGACCTGCGTCAGGAGCAGGAAATCCTTGATACCGACCATTATGGTCTGGAGCGCGTGAAAGATCGCATCCTTGAGTATCTTGCGGTTCAAAGCCGTGTCAACAAAATCAAGGGACCGATCCTCTGCCTGGTAGGgc > 1:378808/1‑143 (MQ=255) aaaaaaGACCTGCGTCAGGAGCAGGAAATCCTTGATACCGACCATTCTGGTCTGGAGCGCGTGAAAGATCGAATCCTTGAGTATCTTGCGGTTCAGAGCCGGGTCAAGAAAATCACGGAACCGATACTCTGCATGGGTGGgcg > 2:1014113/1‑142 (MQ=255) aaaaaGACCTGCGTCAGGAGCAGGAAATCCTTGATACCGACCATTATGGTCTGGAGCGCGTGAAAGATCGAATCCTTGAGTATCTTGCGGTTCAAAGCCGTGTCAACAAAATCAAGGGACCGATCCTCTGCCTGGTAGGgccg > 2:814534/1‑143 (MQ=255) aaaaaGACCTGCGTCAGGAGCAGGAAATCCTTGATACCGACCATTATGGTCTGGAGCGCGTGAAAGATCGAATCCTTGAGTATCTTGCGGTTCAAAGCCGTGTCAACAAAATCAACGGACCGATCCTCTGCCTGGTAGGgccg > 2:545029/1‑143 (MQ=255) aaaGACCTGCGTCAGGAGCAGGAAATCCTTGATACCGACCATTATGGTCTGGAGCGCGTGAAAGATCGAATCCTTGAGTATCTTGCGGTTCAAAGCCGTGTCAACAAAATCAAGGGACCGATCCTCTGCCTGGTAGGgccgcc > 2:440415/1‑143 (MQ=255) aaaGACCTGCGTCAGGAGCAGGAAATCCGTGATACCGACCATTATGGTCTGGAGCGCGTGAAAGATCGAATCCTTGAGTATCTTGCGGTTCAAAGCCGTGTCAACAACATCAAGGGACAGATCCGCTGCCTGGTACGgccgcc > 2:688341/1‑143 (MQ=255) aGACCTGCGCCAGGAGCAGGAACTCCTTGATACCGACCATTATGGTCTGGAGCGCGTGAAAGATCGAATCCTTGAGTATCTTGCGGTTCAAAGCCGTGTCAACAAAATCAAGGGACCGATCCTCTGCCTGGTAGGGCCGCCgg < 1:630024/143‑1 (MQ=255) gccTGCGACAGGAGCAGGTGTTGGTTGATCGCGACCATTATGGTCTGGAGCGCGTGAAAGATCGAATCCTTGAGTAGCGTGCGGTTCAAAGCCGTGTCAACAAAATCAAGGGACCGATCCTCTGCCTGGTAGGGCCGCCgggg < 1:414299/142‑1 (MQ=255) aCCTGCGTCAGGAGCAGGAAATCCTTGATACCGACCATTATGGTCTGGAGCGCGTGAAAGATCGAATCCTTGAGTATCTTGCGGTTCAAAGCCGTGTCAACAAAAGCAAGGGACCGATCCTCTGCCTGGTAGGGCCGCCgggg > 1:767108/1‑143 (MQ=255) ccTGCGTCAGGAGCAGGAAATCCTTGATACCGACCATTATGGTCTGGAGCGCGTGAAAGATCGAATCCTTGAGTATCTTGCGGTTCAAAGCCGTGTCAACAAAATCAAGGGACCGATCCTCTGCCTGGTAGGGCCGCCggggg > 1:930050/1‑143 (MQ=255) tGCGTCAGGAGCAGGAAATCCTTGATACCGACCATTATGGTCTGGAGCGCGTGAAAGATCGAATCCTTGAGTATCTTGCGGTTCAAAGCCGTGTCAACAAAATCAAGGGACCGATCCTCTGCCTGGTAGGGCCGCCGGGggta > 1:992080/1‑143 (MQ=255) tGCGTCAGCAGCAGGCAATCCTGGCTACGGACCATTATGGTCTGGAGCGCGTGAAAGATCGAATCCTTGAGTATCTTGCGGTTCAAAGCCGTGTCAACAAAATCAAGGGACCGATCCTCTGCCTGGTAGGGCCGCCGGGggta < 1:724190/143‑1 (MQ=255) gCGTCAGGAGCTGGAAATCGTTGATGCCGACCATGTTGGTCTGGAGGGCGTGAAAGATCGAGTCCTTGAGTAGCTTGGGGTTCAAAGCCGTGTCAACAAAATCAAGGGACCAATCCTCTGCCTGGTAGGGCCGCCGGGggtag < 2:971631/143‑1 (MQ=255) cGTCAGGAGCAGGAAATCCTTGATACCGACCATTATGGTCTGGAGCGCGTGAAAGATCGAATCCTTGAGTATCTTGCGGTTCAAAGCCGTGTCAACAAAATCAAGGGACCGATCCTCTGCCTGGTAGGGCCGCCGGGggtagg > 1:17059/1‑143 (MQ=255) | AAAGCGGAAGCAGAGTTGCAGAAGCTGAAAATGATGTCTCCGATGTCGGCAGAAGCGACCGTAGTGCGTGGTTATATCGACTGGATGGTACAGGTGCCGTGGAATGCGCGTAGCAAGGTCAAAAAAGACCTGCGTCAGGCGCAGGAAATCCTTGATACCGACCATTATGGTCTGGAGCGCGTGAAAGATCGAATCCTTGAGTATCTTGCGGTTCAAAGCCGTGTCAACAAAATCAAGGGACCGATCCTCTGCCTGGTAGGGCCGCCGGGGGTAGG > NC_000913/459695‑459969 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |