New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	566777 =	NA (NA)	2989 (37.120)	272/280	0.0	97.4%	noncoding (1/1258 nt)	IS3	repeat region
	?	NC_000913	= 572471	82 (1.010)					coding (6/456 nt)	ybcN	DLP12 prophage; DNA base‑flipping protein

AGATCGCAGAAATTAAAGCTAAGTTCGGACTGAAAGGAGCAAGTGTATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCT  >  NC_000913/566638‑566912                                                                                                                                            |                                                                                                                                        aGATCGCAGAAATTAAAGCTAAGTTCGGACTGAAAGGAGCAAGTGTATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGAt                                                                                                                                      <  1:332398/143‑1 (MQ=255)   aTCGCAGAAATTAAAGCTAAGTTCGGACTGAAAGGAGCAAGTGTATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCt                                                                                                                                    >  1:158427/1‑143 (MQ=255)      gCAGAAATTAAAGCTAAGTTCGGACTGAAAGGAGCAAGTGTATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACCGGCCGTCGCCGCGGTAACAGGCGCAACCGAAATCTGAtaatac                                                                                                                                 >  1:251467/1‑138 (MQ=255)       ctgAAATTAAAGCTGATTTTGGACTGAAAGGAGCAAGTGTATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTAcc                                                                                                                                <  2:991938/141‑1 (MQ=255)       cAGAACTTAAGGCTAAGTTCGGACTGAAAGTAGCAAGTGTATGACGGGCAAAGAGGCAATTATTCATTACCCGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTAcc                                                                                                                                <  2:1209923/143‑1 (MQ=255)       cAGAAATTAAAGCCAAGTTCGGACTGAAAGGAGCAAGTGTATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTAcc                                                                                                                                <  1:804534/143‑1 (MQ=255)        aGAAATTAAAGCTAAGTTCGGACTGAAAGGAGCAAGTGTATGACGGGCAAAGAGGAAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTAccc                                                                                                                               >  2:661452/1‑143 (MQ=255)         gAAATTAAAGCTAGGTTCGGACTGAAAGGAGCAAGTGTATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCa                                                                                                                              <  1:1194964/143‑1 (MQ=255)          aaaTTAAAGCTAAGTTCGGACTGAAAGGAGCAAGTGTATGACGGGCAAAGCGGCAATTATTCATTACCTGGGGACGCGTAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTCAACCACGCTACTGTAATCTGATCTTACCCAg                                                                                                                             >  1:1306883/1‑143 (MQ=255)                    tAAGTTCGGACTGAAAGGAGCAAGTGTATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGa                                                                                                                   <  1:1139938/143‑1 (MQ=255)                    caaGTTCGGACTGAAAGGAGCAAGTGGACGACGGGCAAAGAGGCAATTATTCAGTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGa                                                                                                                   <  1:965633/142‑1 (MQ=255)                           tgACTCAAAGGAGCAAGTGTATGAAATATTAAGAGGCCTTGTTCCATTACCTGGCGACGCATAAGAGCATCTGTGCATATGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCgg                                                                                                            <  2:505468/142‑1 (MQ=25)                           ggACTGAAATGTGTAGGTGTATGACGGGCAAAGAGGCAATTATTCATTACCTGGTGAGGCATCAGTGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCgg                                                                                                            <  2:1157295/143‑1 (MQ=38)                            gACTGAAAGGAGCAAGTGTATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCAAGCAATAGTGGACACGCGGc                                                                                                           >  1:423868/1‑143 (MQ=255)                              cTGAAAGGAGCAAGTGTATGACGGGCAAAGAGGCAATTATTCATTAACTGGGGACGCATAAGAGCTTCTGTGCGCAGGACGTTGCGGCGGTAACAGGCGCAACCGTAATATGATCTTACCCAGGAATAGTGGACACGCGGCTa                                                                                                         >  2:45475/1‑143 (MQ=255)                               tGAAAGGAGTAAGGGTATGACGGGCAAAGAGGCAATTATTGATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTaa                                                                                                        <  2:1439509/143‑1 (MQ=255)                               agAAAGGAGCAAGTGTATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTaa                                                                                                        >  1:1241745/2‑143 (MQ=255)                                 aaaGTAGCAAGTGTATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGt                                                                                                      <  1:1180755/143‑1 (MQ=255)                                 aaaGGAGCTAGTGTATGACGGGCAAACAGGCAATTATGCCTTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGt                                                                                                      <  1:3573/143‑1 (MQ=255)                                 aaaGGAGCAAGTGTATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGt                                                                                                      >  1:226472/1‑143 (MQ=255)                                   aGGAGCAAGTGTATGGAGGGCAGAGAGGGGAGTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTGGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGa                                                                                                    <  2:1030669/143‑1 (MQ=38)                                   aGGAGCAAGTGTATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGa                                                                                                    <  2:203681/143‑1 (MQ=255)                                     gAGCAAGTGTATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACAAGCGGCTAAGTGAGt                                                                                                  >  2:1227088/1‑143 (MQ=255)                                        cAAGTGTATGACGGGCAAAGATGCAATTATTCATTACGTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTaaa                                                                                               <  2:1456037/143‑1 (MQ=255)                                         aaGTGTATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAAc                                                                                              <  2:74756/143‑1 (MQ=255)                                          aGTGTATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAAct                                                                                             <  2:596116/143‑1 (MQ=255)                                           gtgtATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAActc                                                                                            <  1:325789/143‑1 (MQ=255)                                            tgtATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTACGTGAGTAAActct                                                                                           >  1:693240/1‑143 (MQ=255)                                              tATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCtca                                                                                         <  1:488904/143‑1 (MQ=255)                                               gggACGCGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCtcag                                                                                        <  2:858937/141‑1 (MQ=255)                                                tGACGGGCGAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCtcagt                                                                                       >  2:47699/1‑143 (MQ=255)                                                tGACGCGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGTAACCGTAATCTGATCTTACCCAGCACTAGTGGACACGCGGCTAAGTGAGTAAACTCtcagt                                                                                       >  2:1218052/1‑143 (MQ=255)                                                  aCGGGCAAAGAGGCAATTATTCATTGCCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGACGCGGTAACAGGCGCAACCGTAATCTGATCTTACCAAGCAATAGTGGAAACGCGGCTAAGGGAGTAAAATCtcagtca                                                                                     >  2:86203/1‑143 (MQ=255)                                                  aCGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCCACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACCCtcagtac                                                                                     >  2:1326957/1‑141 (MQ=255)                                                     ggCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCagag                                                                                  >  1:1419992/1‑143 (MQ=255)                                                     ggCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTGGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCGAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGGCagag                                                                                  >  1:426990/1‑143 (MQ=255)                                                       cAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGt                                                                                <  2:5573/143‑1 (MQ=255)                                                       cAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGt                                                                                <  1:697952/143‑1 (MQ=255)                                                       cAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACCCGGCCAAGTGCGTAAACTCTCAGTCAGAGGt                                                                                >  2:1062668/1‑143 (MQ=255)                                                          agagGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGAc                                                                             >  2:1469368/1‑143 (MQ=255)                                                              tcAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTcac                                                                         <  2:69781/142‑1 (MQ=255)                                                              gCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCGGCGATAGTGGACCCGCGGCTCAGTGAGTAACCTCTCAGTCCGAGGTGCCTctc                                                                         >  1:597404/1‑141 (MQ=255)                                                               cAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTcaca                                                                        >  1:189257/1‑143 (MQ=255)                                                                 ataattCATTACCCGGGTACGCATAAGTGCTTCTGGGCACAGTACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCCGCAATAGTGGACACGCGGCTAAGTGAGTCACCTCTGACTGAGAGTTTACTcactta                                                                      <  2:345152/140‑4 (MQ=21)                                                                  ttattCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGAAGCACATGa                                                                     >  2:989324/1‑143 (MQ=255)                                                                       cATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACaaaa                                                                <  2:218537/143‑1 (MQ=255)                                                                        aTTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACaaaaa                                                               >  2:935726/1‑143 (MQ=255)                                                                            ccTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCCATAGTGGACACGCGGCTAAGTGAGTAAACCCTCAGTCAGAGCTAACCCACATGACAAAAACAGt                                                           >  2:228304/1‑143 (MQ=25)                                                                            ccTGGGGACGCATAAGAACTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGt                                                           <  2:1081363/143‑1 (MQ=255)                                                                             cTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTCATATGTAATTACTTAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTATCAGTCAGAGGTGACTCACATGACAAAAACAGTa                                                          >  1:922868/1‑143 (MQ=21)                                                                             cTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTa                                                          <  1:661452/143‑1 (MQ=255)                                                                             cTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCAGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAACAACAGTa                                                          >  1:341015/1‑143 (MQ=255)                                                                             cTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTCGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTa                                                          <  1:1138772/143‑1 (MQ=255)                                                                              gggggGCGCAGAAGAGCCTCGGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTAt                                                         <  2:1465006/142‑1 (MQ=255)                                                                                 ggACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCaa                                                      >  2:1280350/1‑143 (MQ=255)                                                                                  gACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAAc                                                     <  2:35446/143‑1 (MQ=255)                                                                                    cGCATAAGAGCTTCTGTGCACAGGACGTTGCAGCGCAGACAGTCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCa                                                   <  2:302195/143‑1 (MQ=18)                                                                                     gCATAAGAGCGTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAg                                                  <  2:762794/143‑1 (MQ=255)                                                                                      cATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGt                                                 >  2:1343591/1‑143 (MQ=255)                                                                                       aTAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGACGTGACTCACATGACAAAAACAGTATCACCCAGTa                                                >  1:619539/1‑143 (MQ=255)                                                                                         aaGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTaaa                                              >  2:604186/1‑143 (MQ=255)                                                                                          agagCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCCGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAACACAGTATCAACCAGTaaaa                                             >  2:1161911/1‑143 (MQ=255)                                                                                          agagCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGAAACCGTAAACGGATCTTACCCAGCAATAGAGGACACGCGGCTAAGTGAGTAAACCATCAGTCAGAGATGACTCACATGACAAAAACAGTATCGGCAAGTaaaa                                             >  2:803866/1‑143 (MQ=18)                                                                                            agCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTaaaaaa                                           <  1:870096/143‑1 (MQ=255)                                                                                              cagccgtgCACAGGTCGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAAcc                                         <  2:1292789/138‑1 (MQ=255)                                                                                               ttCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATCGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACACCAACAGTATCAACCAGTAAGAAAccc                                        >  1:961305/1‑143 (MQ=255)                                                                                               ttCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATAAACCAGTAAAAAAccc                                        >  1:1440918/1‑143 (MQ=255)                                                                                                  tgtgCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGt                                     <  1:1295781/143‑1 (MQ=255)                                                                                                   gtgCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCgaa                                    >  2:412747/1‑141 (MQ=255)                                                                                                       acaGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAACAACAGTATCAACCAGTAACAAACCCCGtcaccc                                >  1:830362/1‑138 (MQ=255)                                                                                                       acaGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACa                                >  1:440858/1‑143 (MQ=255)                                                                                                       acaGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACa                                >  1:270248/1‑143 (MQ=255)                                                                                                           gACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCCGTAAAGAACCCGGTAAAccgaat                            >  2:199177/1‑138 (MQ=255)                                                                                                               gtGCCGCGGTAACAGGCGCAACGGTAATCTGATCTGACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACGCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGc                        <  2:1374365/142‑1 (MQ=255)                                                                                                                      ggTAACCGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAAtt                 <  2:113981/143‑1 (MQ=255)                                                                                                                        tAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCAGAATTTc               >  1:1047093/1‑143 (MQ=255)                                                                                                                           cAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGTTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCa            <  1:920953/143‑1 (MQ=38)                                                                                                                           cAGGCGCAACCGTAATCTGATCATACCCAGCAAGAGGGGCCACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAACACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCa            <  1:225616/143‑1 (MQ=14)                                                                                                                            aGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTACGTGAGTACACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGAATGCCGCCGTATTTCGccg           >  1:1300764/1‑141 (MQ=11)                                                                                                                            aGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAg           >  2:1309636/1‑143 (MQ=38)                                                                                                                                gcAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGCGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTACACAGCATTCGACTGAATTTCgacgtaaa       >  2:141508/1‑136 (MQ=11)                                                                                                                                 cgaCCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGCAg      >  1:303574/3‑143 (MQ=17)                                                                                                                                     cGTAATCTGTGCTTACCCAGCAATCGTGGACACGCGGCTATGTGATTACACTCTCAGGCAGATGTCACTCACATGACAATAACAGTATCAACCAGTAAAAAACCCCGTAGACAGCATTCGCCTGAATTTCGCCGTGAAGCCCt  <  2:378371/143‑1 (MQ=11)                                                                                                                                     cGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCt  >  1:384136/1‑143 (MQ=11)                                                                                                                                     cGTAATCTGATCGTACCCAGCAATAGGGGACACGCGGCGAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCt  <  2:910374/143‑1 (MQ=2)                                                                                                                                            |                                                                                                                                        AGATCGCAGAAATTAAAGCTAAGTTCGGACTGAAAGGAGCAAGTGTATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCT  >  NC_000913/566638‑566912

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.