| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,410,991 | T→A | 6.2% | intergenic (+107/+22) | dbpA → / ← ttcA | ATP‑dependent RNA helicase DbpA/tRNA cytosine(32) 2‑sulfurtransferase TtcA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,410,991 | 0 | T | A | 6.2% | 200.1 / 4.0 | 79 | intergenic (+107/+22) | dbpA/ttcA | ATP‑dependent RNA helicase DbpA/tRNA cytosine(32) 2‑sulfurtransferase TtcA |
| Reads supporting (aligned to +/- strand): ref base T (31/42); new base A (2/3); total (33/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.30e-01 | |||||||||||
AAAGGAAAAACGTGCCGGGTGCGGTTATTAAAATAATGAAATGTTGAATTGCCGGGTGCAAGAGTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCC‑GCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCG‑GGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTGATTTTCATCTTCTTCTGGCTGCCAGCACGCCGGTTGTAGTGGGATCTCTTCGCGATCAAACGCCAGATCACCCCCGTTA > NC_000913/1410849‑1411133 | aaaGGAACAACGTGCCGGGTGCGGTTATTAAAATAATGAAATGTTGAATTGCCGGGTGCAAGAGTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCC‑GCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCtt < 1:477425/143‑1 (MQ=255)aaaGGAAAAACGTGCCGGGTGCGGTTATTAAAATAATGAAATGTTGAATTGCCGGGTGCAAGAGTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCC‑GCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCtt > 1:79855/1‑143 (MQ=255) aaGGAAAAACGTGCCGGGTGCGGTTATTAAAATAATGAAATGTTGAATTGCCGGGTGCAAGAGGAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCC‑ACGTCATATCCGGCCTCCATAAGAGTAGCCCGATACGCTTg > 1:690185/1‑143 (MQ=255) aaGGAAAAACGTGACGGGTGCGGTTATTAAAATAATGAAATGATGAATTGCCGGGTGCAAGAGTAAAAATATTATTCGGGATTGCCGGATGCGACGCTGGAC‑GCGTATTATCAGGACTCCATAAGAGTAGCCCGATAAGCTTg > 2:258577/1‑143 (MQ=255) aggaaggaCGTGCCGGGTGCGGTGATGAAAATAATGGAATGTTGAGTTGCCGGGTGCAAGAGTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCC‑GCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTgc < 1:775990/143‑1 (MQ=255) aGGAAAAACGTGCCGGGTGCGGTTATTAAAATAATGAAATGTTGAATTGCCGGGTGCAAGAGTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCC‑GCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTgc < 1:819637/143‑1 (MQ=255) aaaCGTGCCGGGTGCGGTTATTAAAATAATGAAATGTTGAATTGCCGGGTGCAAGAGTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCC‑GCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATc > 1:178696/1‑143 (MQ=255) aaaCGTGCCGGGTGCGGTTATTAAAATAATGAAATGTTGAATTGCCGGGTGCAAGAGTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCC‑GCGGCTTATCCGGCCTCGATAAGAGGAGCCCGGTGCGGTTgggcggc > 1:211175/1‑140 (MQ=255) cGTGCCGGGTGGGGTTATTAAAATAATGAAATGTTGAATTGCCGGGTGCAAGAGTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCC‑GCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCg‑gg < 2:388318/143‑1 (MQ=255) gCCGGGGGAGGTTAGTAAAATAATGAAATGTTGAATTGCCGGGTGCAAGAGTAAAAATCTTATTCGGGATTGCCGGATGCGACGCTGGCC‑GCGTCTTATCCGGCCGCCATAAGAGTAGCCCGATGCGCAAGCGTATCG‑Ggcta < 2:198734/143‑3 (MQ=255) ggTGTGGTTATTAACATAATGAAATGTTGAAGTGGCGGGTGCAAGAGTAAACATCTTATTCGGGATTGCCGGAGGCGACGCTGGCC‑GCATCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCG‑GGCGCTATc < 2:107240/143‑1 (MQ=255) gTGCGGTTATTAAAATAATGAAATGTTGAATTGCCGGGTGCAAGCGTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCC‑GCGTCTTATCCGGCCTCGATAAGAGTCGCCCGATACGCCTGCGCATGG‑GCCGCCAtgc > 2:255825/1‑141 (MQ=255) gtggTTAGTAGAATAATGTAAGGTTGAATTGCCGGGTGCAAGAGTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCC‑GCGTCGTAGCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCG‑GGCGCTATCCTg < 2:435596/141‑1 (MQ=255) gTTATTAAAATAATGAAATGTTGAATTGCCGGGTGCAAGAGTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCC‑GCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATGCGCAAGCGTATCg‑gg > 2:583067/1‑130 (MQ=255) gTTATTAAAATAATGAAATGTTGAATTGCCGGGTGCAAGAGTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCC‑GCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATGCGCAAGCGTATCg‑gg < 1:583067/130‑1 (MQ=255) ttattaAAATAATGAAATGTTGAATTGCCGGGTGCAAGAGTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCC‑GCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCG‑GGCGCTATCCTGGTTa < 1:730528/143‑1 (MQ=255) ttattaAAATAATGAAATGTTGAATTGCCGGGTGCAAGAGTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCC‑GCGGCCGATCCGGCCTCCATAAGCGTAGCCCGATACGCTTGCGCATCG‑GGCGCTATCCTGGttc > 1:312416/1‑142 (MQ=255) attaAAATAATGAAATGTTGAATTGCCGGGTGCAAGAGTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCC‑GCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCG‑GGCGCTATCCTGGGTAtt > 2:26744/1‑143 (MQ=255) ttaAAATAATGAAGTGTTGGATTGCCGGGTGCAAGAGTAACCTTCTTATTCGGGATTGCCGGATGCGACGCTGGCC‑GCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCG‑GGCGCTATCCTGGTTAttt < 2:487975/143‑1 (MQ=255) aaacTAAGGAAACGTTGATGTGCCGGGTGCAAGAGTAAACATCTTACTCGGGATCGCCGGATGCGACGCTGGCC‑GCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCG‑GGCGCTATCCTGGTTATTTCa < 1:41584/143‑1 (MQ=255) aaaaTAATGAAATGTTGAATTGCCGGGTGCAAGAGTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCC‑GCGTCTTATCCGGCCTCCATAAGAGTGGGGTGAAGCGCCTGCGCATCG‑GGCGCTATCCTGGTTATTTCa > 2:819242/1‑143 (MQ=255) aaaaTAATGAAATGTTGAATTGCCGGGTGCAAGAGTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCC‑GCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCG‑GGCGCTATCCTGGTTATTTCa < 2:726159/143‑1 (MQ=255) aaaaTAATGAAATGTTGAATTGCCGGGTGCAAGAGTAAACATCTTATTCGGGATTGCCGGAGGCGACGATGGCC‑GCGTCTTATCCGGCCTCCATAAGGGTAGCCCGATACGCTTGCGCATCG‑GGCGCTATCCTGGTTATTTCa > 2:374349/1‑143 (MQ=255) aaaTAATGAAATGTTGAATTGCCGGGTGCAAGAGTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCC‑GCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCG‑GGCGCTGTCCTGGCTATTTCAc > 1:211415/1‑143 (MQ=255) actaatGAAATGTTGAACCGCCGGGTGCAAGAGTAAACATCTTATTCGGGATTGCCGGAGGCGACGCTGGCC‑GCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCG‑GGCGCTATCCTGGTTATTTCACt < 1:135868/141‑1 (MQ=255) atGAAATCTTGAACTGCCGGGTGCAAGAGTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCC‑GCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCG‑GGCGCTATCCTGGTTATTTCACTTCaa < 1:69858/143‑1 (MQ=255) tGAAATGTTGAATTGCCGGGTGCAAGAATAAACATCTTATTCGGGATTGCCGGATGCGACGATGGCC‑GCGTCTTATCCGGCCTCCATAAGAGGAGCCCGAGACGCTTGCGCGTCC‑GGCGCTATCCTGGTTAATGCACTTCAAc > 2:80672/1‑143 (MQ=255) ttGCCGGGTGCAAGAGTAAACATCTTATTCGGGATTGCTGGATGCGAAGCTGGCC‑GCGTCTTATCCGGCCTCCATCAGAGTAGCCCGATACGCTTGCGCATCG‑GGCGCGATCATCGTTATTTCACATCGACCCCATTCAGCCg > 2:263589/1‑143 (MQ=255) gggTGGAAGGGTAGAGAGCTTGTTCGGGAGTGCCGGATGGGGCGCGGGCC‑GCGGGTTATCCGGCCGCAATAAGGGGAGCACGATACGCTTGCGCATCG‑GGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACt < 2:650748/143‑1 (MQ=255) gggTGCAAGAGTAAACATCTTATGCGGGATTGCGGGATGAGACGCTGTCC‑GCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCG‑GGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACt < 1:351238/143‑1 (MQ=255) ggTGCAAGAGTACACATCTCACTCGGGATTGCCGGATGCGACGCTGGCC‑GCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCG‑GGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTc < 1:26468/143‑1 (MQ=255) gTGCAAGAGTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCC‑GCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCG‑GGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCa < 1:531651/143‑1 (MQ=255) ggacatagTAAACAGCTTATTCGGGCTGGCCGGAGTCGACGCTGTCC‑GCGTCTTATCGGGCCCCCATAAGAGGAGCCCTCTACGCTTGCGCATCG‑CGCTCTACCCTCGTTATTTCACTTCAACCACATTCAGCCGTAACTCAt < 2:461803/137‑1 (MQ=255) accAATAGTAATCGGCTTATTCGGGTTTGCCGGATGCGACGCTGGCC‑GCGTCTTATCCAGCCTCCATAATAGTAGCCCTATCCGCTTGCGCATCG‑GGCGTTATCCTGGTTATTTCACTTCAACCACATTCAGCCTTAACTCAt < 2:89949/141‑1 (MQ=255) tAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCC‑GCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCG‑GGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTCACTCATCCAACTGa > 1:694551/1‑143 (MQ=255) ttCGGGATTGCCGGATGCGACGCTGGCC‑GCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCG‑GGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTGATTTTCAtcttc < 1:728947/143‑1 (MQ=255) ttCGGGATTGCCGGATGCGACGCTGGCC‑GCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCG‑GGCGCTATCCTGCTTATCTAACCACAACCACATTCCGCCGTAACTCATCCAACTGCATTTCatcatc > 2:776783/1‑143 (MQ=255) cGGGATTGCCGGATGCGACGCTGGCC‑GCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCG‑GGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTGATTTTCAtcttctt > 2:532160/1‑143 (MQ=255) gggATCGCCGGATGCGACGCTGGCC‑GCGTCTTATCCGGCCTCCCTAGGAGTAGCCCGATACGCTTGCGCATCG‑GGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTGATTTTCAtcttcttc < 1:54372/143‑1 (MQ=255) ggaggCCGGATAAGACGC‑GGCCAGCGTCGCATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCG‑GGCGCTATCCTGGTTATTTCACTTCACCCACATCCAGCCGTAACTCATACAACTGATTTTCATCGTCTACTg > 1:696344/5‑143 (MQ=25) atcgCCGGATGCGACGCTGGCC‑GCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCG‑GGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTGATTTTCATCTTCTTCTgg < 1:321138/140‑1 (MQ=255) aTTGCCGGAGGCGACGCTGGCC‑GCGTCTGATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCG‑GGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTGATTTTCATCTTCTTCTgg < 2:767899/143‑1 (MQ=255) gCCGGATAAGACGC‑GGCCAGCGTCGCATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCG‑GGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCACCTGATTTTCATCTTCTTCTGGCTg > 1:319761/1‑143 (MQ=255) ccGGATGCGACGCTGGCC‑GCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCG‑GGCGCTATCCTGGTTCTTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTGATTTTCATCTTCTTCTGGCTGc > 1:436762/1‑143 (MQ=255) cGGATAAGACGCGGCCA‑GCGTCGCATCCGGCCTCCAAAAGAGTAGCCCGATACGCTTACGCATGG‑GAAGCGATCATGGTTATTTCACTTCAACGACATTCAGCCGTAACTCATCCAACTGATTTTCATCTTCTTCTGGCTGcc > 1:460994/1‑143 (MQ=255) ggAGGCGACGCTGGCC‑GCGTCTTATCCGGCCTCCAGAAGAGGAGCCCGATACGCTAGCGAATCGCCTGGCGAT‑TTCGTTGTTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTGATTTTCATCTTCTTCTGGCTGCCa < 1:194988/143‑1 (MQ=255) tGCGACGCTGGCC‑GCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCG‑GGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTGATTTTCATCTTCTTCTGGCTGCCGGCa > 1:21900/1‑143 (MQ=255) tGCGACGCTGGCC‑GCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCG‑GGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTGATTTTCATCTTCTTCTGGCTGCCAGCa < 1:51857/143‑1 (MQ=255) gCGACGCTGGCC‑GCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCG‑GGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTGATTTTCATCTTCTTCTGGCTGCCAGCAc < 2:172044/143‑1 (MQ=255) gCGACGCTGGCC‑GCGTCTTACCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCG‑GGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTGATTTTCATCTTCTTCTGGCTGCCAGCAc < 1:764616/143‑1 (MQ=255) gACGCTGGCC‑GCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCAGCG‑CGCGCTATCCTGGTTAGTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTGGTCTTCAACTTCTTCTTGGTGCCAGcgccg > 2:804034/1‑139 (MQ=255) ggCC‑GCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCG‑GGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTGATTTTCATCTTCTTCTGGCTGCCAGCACGCCGGTTg < 2:571784/143‑1 (MQ=255) ggCC‑GCGTCCGAGCCTTCGTCCATACGAGTAGCCCGAGACGCTTGCGCATCG‑GGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTGATTTTCATCTTCTTCTGGCTGCCAGCACGCCGGTTg < 2:768412/143‑1 (MQ=255) gCC‑GCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATAGGCTTGCGCATCG‑GGCGCGATCCTGGTTATATCACTTCAACCACATTCAGCCGTAACTCATGCAACTGATTTTCAGCTTCGTATGGCTGCCAGCACGGCGGTTGt > 1:276753/1‑143 (MQ=255) gCC‑GCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCG‑GGCGCTATCCTGGTTATCAAACGTCAACCACATTCAGCCGTAACTCATCCAACTGATTTTCATCTTCTTCTGGCTGCCAGCACGCCGGTTGt > 1:711060/1‑143 (MQ=255) cc‑GCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCG‑GGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTGATTTTCATCTTCTTCTGGCTGCCAGCACGCCGGTTGTa > 1:137014/1‑143 (MQ=255) cc‑GCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCG‑GGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTGATTTTCATCTTCTTCTGGCTGCCAGCACGCCGGTTGTa < 1:818790/143‑1 (MQ=255) ttCTTATCCGGCCTCCATAAGAGTAGCCCGTTACGCTTGCGCTTCG‑GGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTGATTTTCATCTTCTTCTGGCTGCCAGCACGCCGGTTGTAGTgg < 2:775464/142‑1 (MQ=255) ttATCCGGCCTCCATAATAGTAGCCCGATACGCTTGCGCATCG‑GGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCACCTGATTTTCATCTTCTTCTGGCTGCCAGCACGCCGGTTGTAGTGGGAt < 2:596440/143‑1 (MQ=255) ttATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCG‑GGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTGATTTTCATCTTCTTCTGGCTGCCAGCACGCCGGTTGTAGTGGGAt < 1:258577/143‑1 (MQ=255) ttATCCGGCCTCCATAAGAGTAGCCCGATACGCGTGCGCATCG‑GGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTGATTTTCATCTTCTTCTGGCTGCCAGCACGCCGGTTGTAGTGGGAt < 2:504013/143‑1 (MQ=255) ttATCCCGCCTCCACAAGAGTCGCCCGATACGCTTGCGCATCG‑GGCGCTATCCTGGTTATTTCACTTCAACCACATTCCGCCGTAACTCATCCAACTGATTTTCATCTTCTTCTGGCTGCCAGCACGCCGGTTGTAGTGGGAt < 2:566887/143‑1 (MQ=255) tCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCG‑GGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTGCTTTTCATCTTCTTCTGGCTGCCAGCACGCCGGTTGTAGTGGGAtctc > 2:69845/1‑143 (MQ=255) tCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCG‑GGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGAAACTCATCCAACTCATTTTCATATTCTTCTGGCTGCCAGCACGCGGGTTGTAGTGGTAtgct > 1:219892/1‑140 (MQ=255) ggCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCG‑GGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTGATTTTCATCTTCTTCTGGCTGCCAGCACGCAGGTTGTAGTGGAATCTCTTc > 2:299167/1‑143 (MQ=255) ccTCCATAAGAGTAGCCCGATACGCTTGCGCATCG‑GGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTGATTTTCATCTTCTTCTGGCTGCCAGCACGCCGGTTGTAGTGGGATCTCTTcgc < 1:52766/143‑1 (MQ=255) cTCCATAAGAGTAGCCCGATACGCTTGCGCATCG‑GGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTGATTTTCATCTTCTTCTGGCTGCCAGCACGCCGGTTGTAGTGGGATCTCTTcgcg > 1:321450/1‑143 (MQ=255) ccATAAGAGTAGCGCGATACGCTTGCGCATCG‑GGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACGCATCCAACTGATTTTCATCTTCTTCTGGCTGCCAGCACGCCGGTTGTAGTGGGATCTCTTCGCGAt < 2:780893/143‑1 (MQ=255) cATAAGAGTAGCCCGATACGCTTGCGCATCG‑GGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTGATTTTCATCTTCTTCTGGCTGCCAGCACGCCGGTTGTAGTGGGATCTCTTCGCGATc < 1:592243/143‑1 (MQ=255) cATAAGAGTAGCCCGATACGCTTGCGCATCG‑GGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACGCATCCAACTGATTTTCATCTTCTTCTGGCTGCCAGCACGCCGGTTGTAGTGGGATCTCTTCGCGATc < 1:325747/143‑1 (MQ=255) aTAAGAGTAGCCCGATACGCTTGCGCATCG‑GGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTGATTTTCATCTTCTTCTGGCTGCCAGCACGCCGGTTGTAGTGGGATCTCTTCGCGATCa > 1:38176/1‑143 (MQ=255) aTAAGAGTAGCCCGATACGCTTGCGCATCG‑GGCGCTATCCTGGTGATTTCACTTCAACCACATTCAGCCGTAACGCATCCAACTGATTTTCATCTTCTTCTGGCTGCCAGGACGCCGGGTGTAGTGGGATCTCGGCGCGGTcc > 1:87076/1‑142 (MQ=255) tgagTAGCCCGATACGCTTGCGCATCG‑GGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTGATTTTCATCTTCTTCTGGCTGCCAGCACGCCGGTTGTAGTGGGATCTCTTCGCGATCAAAc < 2:134755/142‑1 (MQ=255) agagTAGCCCGATACGCTTGCGCATCG‑GGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTGATTTTCATCTTCTTCTGGCTGCCAGCACGCCGGTTGTAGTGGGATCTCTTCGCGATCAAAc < 1:147632/143‑1 (MQ=255) agTAGCCCGATACGCTTGCGCATCG‑GGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCACCTGATTTTCATCTTCTTCTGGCTGCCAGCACGCCGGTTGTAGTGGGATCTCTTCGCGATCAAACGc < 2:70576/143‑1 (MQ=255) gTAGCCCGATACGCTTGCGCATCG‑GGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCCACTGATCTTCATCTTCTTCTGCCTGCCACCACACCGGATGTAGTTGGGTCTCTTCACCATCAACCgac > 2:727902/1‑141 (MQ=255) tAGCCCGATACGCTTGCGCATCG‑GGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTGATTTTCATCTTCTTCTGGCTGCCAGCACGCCGGTTGTAGTGGGATCTCTTCGCGATCAAACGCCa < 1:380046/143‑1 (MQ=255) gCCCGATGCGCAAGCGTATCG‑GGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTGATCTTCATCTTCTTCTGGCTGCCAGCACGCCGGTTGTAGTGGGATCTCTTCGCGATCAAACGCCAGa > 1:711012/1‑143 (MQ=255) gATACGCTTGCGCATCG‑GGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTGATTTTCATCTTCTTCTGGCTGCCAGCACGCCGGTTGTAGTGGGATCTCTTCGCGATCAAACGCCAGATCAc < 1:697601/143‑1 (MQ=255) tACGCCGGCGCATCG‑CGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTTATTTTCATCTTCTCCTGGCTGCCAGCACGCCGGTTGTAGTGGGATCTCTTCGCGATCAAACGCCAGATCAccc < 1:77482/143‑1 (MQ=255) cTTGCGCATCC‑GGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTGATTTTCATCTTCTTCTGGCTGCCAGCACGCCGGTTGTAGTGGGATCTCTTCGCGATCAAACGCCAGATCACCCCCGt < 1:577284/143‑1 (MQ=255) ttGCGCATCG‑GGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTGATTTTCATCTTCTTCTGGCTGCCAGCACGCCGGTTGTAGTGGGATCTCTTCGCGATCAAACGCCAGATCACCCCCGtt < 1:335309/143‑1 (MQ=255) tGCGCATCG‑GGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTGATTTTCATCTTCTTCTGGCTGCCAGCACGCCGGTTGTAGTGGGATCTCTTCGCGATCAAACGCCAGATCACCCCCGTTa > 1:4454/1‑143 (MQ=255) | AAAGGAAAAACGTGCCGGGTGCGGTTATTAAAATAATGAAATGTTGAATTGCCGGGTGCAAGAGTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCC‑GCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCG‑GGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTGATTTTCATCTTCTTCTGGCTGCCAGCACGCCGGTTGTAGTGGGATCTCTTCGCGATCAAACGCCAGATCACCCCCGTTA > NC_000913/1410849‑1411133 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |