| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,466,201 | T→C | 11.4% | pseudogene (810/2518 nt) | ydbA → | putative outer membrane protein, N‑terminal fragment |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,466,201 | 0 | T | C | 11.4% | 161.1 / 6.3 | 78 | pseudogene (810/2518 nt) | ydbA | putative outer membrane protein, N‑terminal fragment |
| Reads supporting (aligned to +/- strand): ref base T (21/44); new base C (6/5); total (28/50) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.83e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ATGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAG > NC_000913/1466059‑1466339 | aagCCACAGTACACAACAAGGGCCAAACCACCGTTGAGGGTAAAGATTCCAGCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGAGGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGt < 2:678995/141‑1 (MQ=14) gCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTACTAACGGGAAAGTGATTCAGGACGACGATCTGGATGTCAGCGGCGGCGGTCACGGTAATGATATCACCAGTGa > 1:347001/1‑143 (MQ=255) cacaGTAACCAACAATGGTAAAACAACCGTTGACGGTAAACATTCCACCTGTACGGAAATCAACGGTAATAAGGGGAAAGTGATTCAAGACGACTATCTGTATTGTAGTGTCGGCGGTCACGGTATTGATATCACCGGTGACa < 1:356583/143‑1 (MQ=17) cacaGTAAACAACGATGGCAAAGCCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACa < 2:789113/143‑1 (MQ=255) caGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAgc < 1:618064/143‑1 (MQ=255) aacaacAATGGCAAAACCACCGTTGATGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAgcgcaac > 1:542115/1‑140 (MQ=255) ggacggggCAAGACCACGGTGGGCGGTAGAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGt < 2:828038/137‑1 (MQ=11) agcaaTGAAAAAATCACCGTTGACGGTAAAGATTCCACCGTTACGAAAATCAACGGTAATAACGGGAAAGTGATTCAGGACTGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGt < 2:374776/141‑1 (MQ=14) aacgaTGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAAAAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGt < 2:196707/143‑1 (MQ=255) aggtgacAAAGCCACGGTTGGGGGTCGGGAGTCGACCGGTGCGGAAGGCGACGGTAATGGGGGGAAAGTGGTTCCGGACGGCGATTTGGATGTCAGCGGCGGCAGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTgg < 2:723285/137‑1 (MQ=9) gttagtgaaaaCAACGTGGACGGGAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGa < 1:566720/136‑1 (MQ=14) aaTGGCAAAACCACCGTGGACGCTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGa < 2:203551/143‑1 (MQ=255) gCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCGACGGTGGGTaag > 1:828038/1‑142 (MQ=255) gCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCGACGGTGGATAAc > 1:645913/1‑143 (MQ=255) cAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAgcg > 1:821637/1‑128 (MQ=255) cAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAgcg < 2:821637/128‑1 (MQ=37) cAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAAACCGCGGTGAAGACGGGGAAGGGATACAGGACGGCGAACCGCGTGGCAGCGCCGGCGGTCACAGTATAGAGATCACCGGAGCCAGCGCGCCGGTGGGAAACa > 2:643806/1‑143 (MQ=255) cAAAACCACCGGTGACGGTAAAGATTCCACCGGTACGGAAAGCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACa < 1:456273/143‑1 (MQ=255) aaaaCACGGGTGACGGTACAGATGCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAg < 1:701792/143‑1 (MQ=17) accGTTGACGGTAAAGATTCGACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGAGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCAc < 1:826320/143‑1 (MQ=255) ccGTTGATGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCAcc < 2:542115/143‑1 (MQ=255) aCGGTAATGATTCCACCGGTCGGAAAATCAACGGTAATAACGGGAAAGGGATTCATGACAGCGATCTGGATCTCAGCGGCGGCGTTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGAcc < 2:418460/143‑1 (MQ=14) aCGGTAAAGATGCCACCGGTACGGAATTCAACGGTAATAACGGGAGAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCTCCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGAcc < 2:511197/143‑1 (MQ=255) tAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCa > 1:633181/1‑143 (MQ=255) ttCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATc < 2:523501/143‑1 (MQ=255) ttCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATc < 1:726101/143‑1 (MQ=40) ccACCGGTACGGAAATCAACGGTAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATCTCACCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCg < 1:415618/143‑1 (MQ=255) cACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGGGGATAACAAGGGCACCATGACCGTCACCGATCCgg > 2:146051/1‑143 (MQ=255) aCCGGTACGGAAATCAACGGTAATACCGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGa < 1:50089/143‑1 (MQ=255) ccGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAg < 1:689041/143‑1 (MQ=40) tACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCa < 1:479982/143‑1 (MQ=255) cGGAAGTTAACGGTAATGACGGGGAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCAGGGTATGGATATCACCGGTGACAGCGCGACGGTGGCTAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATg < 2:168616/143‑1 (MQ=14) ggAATTCAACTGTAATAACGGGAAAGTGATTCAGTACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATgg < 1:471619/143‑1 (MQ=255) ggAAATCAACGGGAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATgg < 1:574850/143‑1 (MQ=255) aaaTCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGt > 1:22253/1‑143 (MQ=255) aaaTCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACa > 2:420529/1‑87 (MQ=25) aTCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTAACCGATCCGAAGTCCATGGGTAt > 1:63860/1‑143 (MQ=255) aaCGGTAATAACGGGAGAGGGATTCAGGACGGCGATCTGGAGGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCa < 2:802386/143‑1 (MQ=255) aaCGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCa > 2:219147/1‑143 (MQ=255) aCGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAg > 2:741762/1‑143 (MQ=17) gggaataaGGGGATAGTGATGCAGGGCGGGGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGAt < 2:204827/140‑1 (MQ=14) ttaagatcGGGAATGTGATTTAGGATGGTTATTTGGATGTCAGCGGCGTCGGTCACGGTATTGATATCACTGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCTGAGTCCATGGGTATCCAGATc < 2:503449/136‑1 (MQ=11) tgcggggATAGTGAGTCCGGACGGGGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACg < 2:81569/139‑1 (MQ=14) aCGGGACCGTGGCTCCGGACGGCTACCTGGCTGGCGGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGt < 2:607513/143‑1 (MQ=14) gggAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGAACCGGAGCCCATGGGTACCCCGGTCGACggggg > 1:823734/1‑140 (MQ=14) ggAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGCTAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGCTCGACGGTgcc > 1:193184/1‑141 (MQ=255) ttCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAgc > 1:719687/1‑62 (MQ=35) gACTGCGATCTGGGTGCCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCaa < 2:281121/143‑1 (MQ=255) gACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCaa < 1:836528/143‑1 (MQ=255) cGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATcc > 1:325665/1‑96 (MQ=38) cGGCGATCTGGAGGTCAGCGGCGGCGGTCACGGGAGTGAGATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATa < 1:675757/143‑1 (MQ=255) cGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACg > 1:713179/1‑143 (MQ=255) gATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAg > 1:670080/1‑69 (MQ=255) tGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGCACCCAGACCGACCGTGCCAAGGCAATCGTCCATAACGCAGGc > 2:689194/1‑143 (MQ=14) gATGTCAGAGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACCAGGCGATCGTCAGCCACGAAGGCga > 2:304463/1‑143 (MQ=14) tGTCAGCGCCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCgaga < 1:486846/143‑1 (MQ=255) gTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAgg > 2:52759/1‑102 (MQ=14) tCAGCGGTGGCTGTCACGGTATTGATATCACTGGTGACAGCGCGACGGTGAATTACAAGGGCACCATTTTCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGc < 2:54867/143‑1 (MQ=14) aGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGGCAAGGCCATCGTCAATAACGAAGGCGAGAGCAc > 1:120373/1‑143 (MQ=255) aGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGTCATCGTCAATAACGAAGGCGAGAGCAc < 1:234973/143‑1 (MQ=255) aGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCAACGATCCGGAGTCCATGGGTATCCAGGTCGACGGCGACAAGGCGGTCGTGAACAGCGCAGGAGAGCGCAc > 1:431480/1‑143 (MQ=11) ggcggcggTCACGGTACGGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCAt < 1:54939/143‑1 (MQ=255) gcggTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCAcc < 1:208887/143‑1 (MQ=255) gTCACGGCATTGATATCACCGGTCACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGACCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAAc < 1:139643/143‑1 (MQ=255) tcGGGATTGATATCACCGGGGGCAGCGCGACGCTGGATAACAAGGGCACCATGACCGTCACGGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGt < 1:256933/142‑1 (MQ=17) aCGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGGTCGACGGTGACCAGGCCATCGTCAACAACGAAGGCGCGAGCACCATCACCCACggc > 1:721822/1‑142 (MQ=14) aCGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAg < 2:196758/101‑1 (MQ=255) aCGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAg > 1:196758/1‑101 (MQ=255) aCGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTACCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGt < 1:291600/143‑1 (MQ=255) cgctATGGATATCCCCGGTGACAGCGCGACGGTGGAGAGCGTGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGTCCATCGTCAATAACGAAGGCGAGCGCACCATCACCAACGGTg < 2:689328/140‑1 (MQ=17) tATTGAGATCACCGGCGACCGCGCGACGGTGGATAACAAGGGCACCATGACCGTCCCCGCTGCGGTGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTggca < 2:404376/143‑1 (MQ=17) aTTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTggcac < 2:22253/143‑1 (MQ=255) ttGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTCGACGGCGACAGGGCCAACCGCATGGACGAAGTCGAGAGCGCCATCACCCACGGTggcacc > 2:777158/1‑143 (MQ=14) gATATCACCGGTGACAGCGCGACGGTGGATAACAAg < 2:524474/36‑1 (MQ=255) gATATCACCGGTGACAGCGCGACGGTGGATAACAAg > 1:524474/1‑36 (MQ=255) atatCACCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTggcaccggc < 1:728585/143‑1 (MQ=255) tCACCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTggcaccggcacc < 1:496016/143‑1 (MQ=255) aCCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCa < 2:780983/143‑1 (MQ=255) ccGGCGACAGCGCGACGGTTGATAACAAGGGCACCATGCCCGTCACCGATGCGGAGTCCATAGGTATCCAGATCGACGGTGATAAGGCCATCGTAAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAg < 1:601797/143‑1 (MQ=17) tGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGAt > 1:789299/1‑69 (MQ=255) | ATGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAG > NC_000913/1466059‑1466339 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |