| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,189,525 | C→G | 5.1% | S1392R (AGC→AGG) | rpoC → | RNA polymerase subunit beta' |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,189,525 | 0 | C | G | 5.1% | 212.2 / 5.5 | 80 | S1392R (AGC→AGG) | rpoC | RNA polymerase subunit beta' |
| Reads supporting (aligned to +/- strand): ref base C (40/36); new base G (2/2); total (42/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.78e-02 | |||||||||||
GGCCTGAAAGAGAACGTTATCGTGGGTCGTCTGATCCCGGCAGGTACCGGTTACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGGTTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGA > NC_000913/4189385‑4189665 | ggCCTGAAAGAGAACGTTATCGTGGGTCGTCTGATCCCGGCAGGTACCGGTTACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCACCGCAGGGGACTGCAGAAGACGGATCTGCCCGccc > 2:619954/1‑142 (MQ=255) gCCTGAAAGAGAACGTTATCGTGGGTCGTATGACCCAGGCAGGTACCTGTTACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTg < 1:797808/143‑1 (MQ=255) gCCTGAAAGAGAACGTTATCGTGGGTCGACGGACCCCGGCAGGTACCGGTTACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTg < 1:35759/143‑1 (MQ=255) ccTGAAAGAGAACGTTATCGTGGGTCGTCTGATCCCGGCAGGTACCGGTTACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTgg > 2:315600/1‑143 (MQ=255) tggcagagACCGTTATCGTGGGTCGTCTGATCCCGGCAGGTACCGGTTACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCa < 2:576283/139‑1 (MQ=255) tGAAAGAGAACGTTATCGTGGGTCGTCTGATCCCGGCAGGTACCGGTTACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGGTCCGGCTGCACCGCAGGTGACTGCGGAAGACGCATCTGCCAGCCAGGCa > 2:516347/1‑143 (MQ=255) taaaGAGAACGTTATCGTGGGACGTCGGAGCCCGGCAGGTACCGGTTACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAg < 1:415953/142‑1 (MQ=255) aaaGAGAACGTGATCGGGGGCCGTCTGAGCCCGGCAGGTACCGGTTACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGGCTGGCAGa < 1:88155/143‑1 (MQ=255) agaCCGTCATCGTGGGTCGTCTGAGCCCGGCAGGTACCGGTTACGCGGACCACCAGGATCGTATGCGGCGCCGTGCTGCGGGTGAAGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGGCTGGCAGatgcg < 1:237688/143‑5 (MQ=255) gaACGTGACCGTGGGTCGTCTGATCCCGGCAGGTACCGGTTACGCGTACTATGAGGATCGTATGCGTCGCCGTGCTGGGGGTGAAGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAActgc < 1:590549/143‑1 (MQ=255) gTTATCGTGGGTCGTCTGATCCCGGCAGGTACCGGTTACGCGTACCACCAGGATCGTATGCGTCGCGGTGCTGCGGGTGAAGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCGGGCAGGACTGCTGaa > 1:818198/1‑143 (MQ=255) ttATCGTGTGTCGTCCGATCCCGCCAGGTACCGGTTACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAAc < 1:87617/143‑1 (MQ=255) tATCGTGGGTCGTCTGATCCCGGCAGGTACCGGTTACGCGTACCACCAGGATCGTATGCGTCGCCGCGCTGCGGGTGAAGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGCACTGCTGAACg > 1:121519/1‑143 (MQ=255) tCGTGGGTCGTCTGATCCCGGCAGGTACCGGTTACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCa > 1:154602/1‑143 (MQ=255) tCGTGGGTCGTCTGATCCCGGCAGGTACCGGTTACGCGTACCACCAGGATCGTATGCGTCGCCGCGCTGCGGGTGACGGCGCTTTTTTAGTGCTGGGGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCa > 1:615839/1‑143 (MQ=255) tcgtcTGATCCCGGCAGGTACCGGTTACGCGTACCACCAGGATCGTAGGCGTCGCCGCGCTGCGGGTGAAGCGCGGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCACAAGTGCTGCAAGCAGGTCtag > 2:485158/1‑141 (MQ=255) cgcgagATCCGGGCAGGCACCGGCTACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGACGCTCCGGCTGCCCCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTggg < 1:134665/138‑1 (MQ=255) tcTGATCCCGGCAGGTACCGGTTACGCGTACCACCAGGATCGTATGCGTCTCCGTGCTGCGGGTGAAGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCg < 1:227387/143‑1 (MQ=255) cTGATCCCGGCAGGTACCGGTTACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCTGGCTGCACCGCAGGTGACTGCCCACGCTGCTTGGTCCAACCCAACAAAACTGCTGAACGCAGGTCTGGGCgg > 1:384468/1‑143 (MQ=255) gATCCCGGCAGGTGCCGGTTACGCGTACCACCAGGATCGTATGCGTGGCCGGGCTGCGGGTGAAGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGtt < 2:151702/143‑1 (MQ=255) ccGGCAGGTACCGGTTACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGCGAAGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGGTccag > 2:514190/1‑140 (MQ=255) ggTACCGGTTATGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCACCGCAGGTGACTGCAGAAGCCGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGa < 1:409524/143‑1 (MQ=255) ccGGTTACACGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTACTGAACGCCCGTCTGAGCAGTTCTCATAAcaaacaa > 2:674567/1‑137 (MQ=255) ttACGCGTACCGCCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCGCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGt < 2:12059/143‑1 (MQ=255) ttACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGt < 1:54467/143‑1 (MQ=255) ttACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGt < 1:723004/143‑1 (MQ=255) tACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGtt > 2:292413/1‑143 (MQ=255) cgcgTACCACCAGGATCGTATGCGTCGCCGTGCTCCGGGTGAAGCTGCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGACTGGGAGGCTCTGATAACCACTAAACGTTaa > 2:654186/1‑143 (MQ=255) gcgTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAAt < 1:487379/143‑1 (MQ=255) gTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATcc > 1:407577/1‑143 (MQ=255) gTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCACGTCTGGGCCGATCTGGTAACGAGGCATCGCTAAccc > 2:575535/1‑143 (MQ=255) ccaccaGGATCGTATGCGTCGCCGTGCTGCGGGTCAAGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCACAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCa < 1:602177/143‑1 (MQ=255) caccaGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCaa < 1:677609/143‑1 (MQ=255) caccaGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCaa > 1:732691/1‑143 (MQ=255) accaGGATCGTATGCGTCGCCGCGCTGAGCGAGCGGTCCACGCGCCACCGCAGGTGACTGCAGACGGGGCAGCTGCGAGCCGGGCATAATGACTGAACGCGTGTCGGGGCGGGTCGTGTAACGGGTAATCGTTGATCCTCaag > 2:736880/1‑142 (MQ=255) ccaGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGGTAACGAGTAATCGTTAATCCGCagag > 1:411164/1‑140 (MQ=255) caGGATCGTATGCGTCGCCGTCCTGCGGGTGACGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCAGCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATa < 2:762758/143‑1 (MQ=255) aTCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCCGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGt > 2:843839/1‑143 (MQ=255) aTCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGt > 1:116088/1‑143 (MQ=255) aTCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGCAATCGTTAATCCGCAAATAACGt > 2:217644/1‑143 (MQ=255) tATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTaaaa < 1:721848/143‑1 (MQ=255) tGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAGTAACGTaaaaca > 2:691949/1‑141 (MQ=255) gCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAAcc > 1:572668/1‑143 (MQ=255) cGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAAccc > 1:318886/1‑143 (MQ=255) gTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAACTAACGTACAAACCCg > 1:398950/1‑143 (MQ=255) tCGCCGTGCTGCGGGTGAAGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGACCTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGc > 1:844835/1‑143 (MQ=255) ccGTGCTGCGGGTGAAGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTc > 2:636343/1‑143 (MQ=255) ccGTGCTGCGGGTGAAGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGCCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTc > 2:808191/1‑143 (MQ=255) gTGCTGCGGGGGCTGCCCCGGTTGCACGGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAGCGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTcgg < 2:319984/143‑1 (MQ=255) ggctggGGGTGACGCTCCGGCTCCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTcggc < 2:119403/142‑1 (MQ=255) ctgcGGGTGAAGACCCGGCTGGTCCTCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTcggcgg < 1:111964/143‑1 (MQ=255) ctgcGGGGAAAGCGCCGGCTGCACCGCAGGTGACGGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTcggcgg < 1:722823/143‑1 (MQ=255) gcGGGTGAAGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGGt > 1:365501/1‑143 (MQ=255) cGGGTGAAGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAGAACCCGCTTCGGCGGGtt > 1:396824/1‑143 (MQ=255) cTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAACCCCGCTTCGGCGGGCTTTTTTAtca > 2:770439/1‑141 (MQ=255) cTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGGTTTTTTTATgg > 1:637493/1‑143 (MQ=255) ccGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGGTTTTTTTATgggg > 1:500270/1‑143 (MQ=255) ccGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGACTGGGCGGTTCTGATCACGAGTAATCGTTAATCCGCAAATAACGTAAACACCCGCTTCGGCGGGTACCTATATgggg > 2:210969/1‑143 (MQ=255) tGCACCGCAGGTGACTGCAGAGGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGGTTTTTTTATGGGGGGAGt < 2:531662/143‑1 (MQ=255) aCCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGGTTTTTTTATGGGGGGAGTTTa > 1:709407/1‑143 (MQ=255) aCCGCAGGGGACTGCGGAGGGCGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGGTTTTTTTATGGGGGGAGTTTa < 2:498759/143‑1 (MQ=255) ccGCAGGTGGCTGCGGAAGACGGATCGGCCAGCCGGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGACAACGAGTAAGCGTTAATCCGCAAATAACGTAACAACCGGCTTCGGCGGGTTTTTTTATGGGGGGAGTTTAg < 2:181524/143‑1 (MQ=255) ggggACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGGTTTTTTTATGGGGGGAGTTTAGGGaaa < 1:607563/140‑1 (MQ=255) ggTGACTGCAGAAGACGCATCGGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGGTTTTTTTATGGGGGGAGTTTAGGGaaa < 1:81568/143‑1 (MQ=255) tGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGGTTTTTTTATGGGGGGAGTTTAGGGAACGAGCAt > 1:650801/1‑143 (MQ=255) tGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGGTTTTTTTATGGGGGGAGTTTAGGGAAAGAGCAt > 2:784433/1‑143 (MQ=255) agaaggCGCATCGTCCGCCCTGGAAGAACTGCTGACCGCGTGTCTGGGCGGTTCTGGTACCCAGGCATCGTTACTCCGGAAAGGACGTAAAAACCCCCTTCGGCGGGTTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTg < 2:173022/143‑1 (MQ=255) agaagaCGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGGTTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTg > 2:493664/1‑143 (MQ=255) aagaCGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGGATTTTATATGGGGGGAGGTTAGGGGAAGAGGATTTGTc > 2:813660/1‑143 (MQ=255) agcagttCTGCCAGGCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGGTTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAg > 1:678030/7‑143 (MQ=255) gCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGGCTGGGCGGTTCTGATAACGAGTAATCGGTAATCCGCAAAGAACGGAAAAACCCGCTTCGGCGGGTTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAat < 1:166473/143‑1 (MQ=255) gttCTGCCAGGCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTACTCCGCAAATAACGTAAAAACCCGCTTCGGCGGGTTTTATTTTGGGGGGAGTTTATGGAAAGAGCATTTATCAGAata > 1:189350/3‑143 (MQ=255) cATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGCGTCTTTCTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAgcctc > 2:749909/1‑139 (MQ=255) aTCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTACTCGTTAATCCGCACATAACGTAAAAACCCGCTTCGGCGGGTTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAatag > 1:398464/1‑142 (MQ=255) aTCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGGTTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAatat < 2:318886/143‑1 (MQ=255) tGCCACCCTGCCAGAACTGCGGAACGCAGGTCTGGGCGGTTCTGATAGCGAGTAATCGTTAATCCGCAAATAACGTAAAACCCCGCTTCGGCGGGTTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCATAATATTTa < 2:636418/143‑1 (MQ=255) gCCAGCCTTGCGGGACGTCTGAACGCGGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGGTTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTaa < 2:815973/143‑1 (MQ=255) gCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGGTTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTaa < 1:292413/143‑1 (MQ=255) gCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGGTTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTaa < 2:812190/143‑1 (MQ=255) gCCAGCCGGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGGTTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTaa < 1:309470/143‑1 (MQ=255) aGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATACCGCAAAAACCCGCTTCGGCGGGTTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGa < 1:315600/143‑1 (MQ=255) | GGCCTGAAAGAGAACGTTATCGTGGGTCGTCTGATCCCGGCAGGTACCGGTTACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGGTTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGA > NC_000913/4189385‑4189665 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |