| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,196,219 | A→C | 6.6% | intergenic (‑120/+113) | thiC ← / ← rsd | phosphomethylpyrimidine synthase/regulator of sigma D |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,196,219 | 0 | A | C | 6.6% | 221.1 / 2.2 | 87 | intergenic (‑120/+113) | thiC/rsd | phosphomethylpyrimidine synthase/regulator of sigma D |
| Reads supporting (aligned to +/- strand): ref base A (44/35); new base C (3/4); total (47/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.97e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GGGTCAGTTTTGTTGCAGACATAGCTCATTCCAAAAAGTTAAGGACGTGGCTTGTCAGACGACGGATGAAGCAAGAGACGATCGCCGCAGGGGCGATGCGATAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAACTCAAGCAGGATGTTTGACGCGGGCGGCG > NC_000913/4196078‑4196359 | gggtgtattttGGTGCAGACATGGCGCATTCCAAAAGGTTAAGGACGTGGCTTGTCAGGCGACGGATGAAGCAAGAGACGATGGCCGCGGGGGCGATGCGATAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGAt < 2:286856/136‑1 (MQ=255)gggTCAGTTTTTTTGCAGTCATAGCTCATTCCAAAAAGTTAAGGACGTGGCTTGTCAGACGACGGATGAAGCAAGAGACGATCGCCGCAGGGGCGATGCGATAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGAt < 1:21722/143‑1 (MQ=255)gggTCAGTTTTGTTGCAGACATAGCTCATTCCAAAAAGTTACGGACGTGGCTTGTCAGACGACGGATGAAGCAAGAGACGATCGCCGCAGGGGCGATGCGATAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGAt < 1:231921/143‑1 (MQ=255) ggTCAGTTTTGTTGCAGACATAGCTCATTCCAAAAAGTTAAGGACGTGGCTTGTCAGACGACGGATGAAGCAAGAGACGATCGCCGCAGGGGCGATGCGATAGCCGATTAACTCTTGTTCCCTTCGCAGGCATTAGCCTGATc > 2:744247/1‑143 (MQ=255) gTCAGTTTTGTTGCAGACATAGCTCATTCCAAAAAGGTAAGGACGTGGCTTGTCAGGCGACGGAGGAAGCAAGTGATGTGCGCCGCAGGGGCGATGCGATAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCa < 2:139121/143‑1 (MQ=255) cAGTTTTGTTGCAGACATAGCTCATTCCAAAAGGTTAAGGACGTGGCTTGTCAGACGACGGATGAAGCAAGAGACGATCGACCGTGTAGCGGTGCGATAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGCTCAgg > 1:615899/1‑143 (MQ=255) gTTTTGTTGCAGACATAGCTCATTCCAAAAAGTTAAGGACGTGGCTTGTCAGACGACGGATGAAGCAAGAGACGATCGCCGCAGGGGCGATGCGATAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATGAGGtt < 1:697065/143‑1 (MQ=255) ttttGTTGCAGACATAGCTCATTCCAAAAAGTTAAGGACGTGGCTTGTCAGACGACGGATGAAGCAAGAGACGATCGCCGCAGGGGCGATGCGATAGCAGATTAACTCTTGTTCCCTTCGCCGGTATTAGCCTGAACAGGTTc > 2:51269/1‑143 (MQ=255) ttttGTTGCAGACATAGCTCATTCCAAAAAGTTAAGGACGTGGCTTGTCAGACGACGGATGAAGCAAGAGACGATCGCCGCAGGGGCGATGCGATAGCAGATTAACTCGTGTTACCTTCGCAGGTATTAGCCTGATCAGGTTc > 2:322274/1‑143 (MQ=255) gCAGACATAGCTCATTCCACCAAGTTCAGGACGTGCCTCGTGAGACGACGGATGAAGCAAGAGACGATCGCAGCTGGGGGCAAGAGACAGCGGATTAACTCTTGTTCGCTTCGCAGGGATTAGCCTGAGCAGGCTCCGCgggt > 2:214083/1‑141 (MQ=255) aTAGCTCATTCCAAAAAGTTAAGGACGTGGCTTGTCAGACGACGGATGAAGCAAGAGACGATCGCCGCAGGGGCGATGCGATAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGaa < 1:640236/143‑1 (MQ=255) cTCATTCCAAAAAGTTAAGGACGTGGCTTGTCAGACGACGGATGAAGCAAGAGACGATGGCCGCAGGGGCGATGCGATAGCAGATTAACTCTTGTTCCCTTCGCGGGTATTAGCCTGAGCAGGTTCCGCGGATCCCgaagaac > 1:256259/1‑142 (MQ=255) tCATTCCAAAAAGTTAAGGACGTGGCTTGTCAGACGACGGATGAAGCAAGAGACGATCGCCGCAGGGGCGATGCGATAGCAGATTAACTCTTGTTCCCTTCACAGGTATTAGCCTGCTCAGGTTCCGCGGATCCCGAATAAAc > 2:116193/1‑143 (MQ=255) cATTCCAAAAAGTTAAGGACGTGGCTTGTCAGACGACGGATGAAGCACGAGACGATCGCCGCAGGGGCGAGGCGATAGCAAATTAACGCTTGCTCCCTTCGCGGGCAGTAGCCCGATCAGGTTCCGCGGCTACCGACAAAACg > 2:72860/1‑143 (MQ=255) cATTCCAAAAAGTTAAGGACGTGGCTTGTCAGACGACGGATGAAGCAAGAGACGATCGCCGCAGGGGCGATGCGATAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACg < 1:204048/143‑1 (MQ=255) aTTCCAAAAAGTTAAGGACGTGGCTTGTCAGACGACGGATGAAGCAAGAGACGATCGCCGCAGGGGCGATGCGATAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACgg > 1:216395/1‑143 (MQ=255) ttCCAAATAGTTAAGGAGTTGGCTGGTCAGACGACGGATGAAGCAAGAGACGATCGCCGCAGGGGCGATGCGATAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGTTTCCGCGGATCCCGAATAAACGGt < 2:514095/143‑1 (MQ=255) tgccAAAAAGTTAAGGACGTGGCTTGTCAGACGACGGAGGAAGCAAGAGACGATCGCCGCAGGGGCGATGCGATAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGt < 2:267142/141‑1 (MQ=255) tCCAAAAAGTTAAGGACGTGGCTTGTCAGACGACGGATGAAGCAAGAGACGATCGCCGCAGGGGCGATGCGATAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCGGATCAGGTTCCGCGGATCCCGAATAAACGGtc > 1:669919/1‑143 (MQ=255) ccagaaGTTGAGGGCGTGGCTTGTCAGACGACGGATGAAGCAAGAGACGATCGCCGCAGGGGCGATGCGATAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGtctc < 2:749837/139‑1 (MQ=255) aaaaaGTTAAGGACGTGGCTTGTCAGACGACGGATGAAGCAAGAGACGATCGCCGCAGGGGCGATGCGATAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCTCa < 1:471855/143‑1 (MQ=255) aaaGGTAAGGACGTGGCTTGTCAGACGACGGATGAAGCAAGAGACGATCGCCGCAGGGGCGATGCGATAGCAGATTAACTCTTGTGCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCTCAGc < 2:134955/143‑1 (MQ=255) aGTTAAGGGCGTGGCTTGTCAGACGACGGATGAAGCAAGAGACGATCGCCGCAGGGGCGATGCGATAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCTCAGCCa < 2:263388/143‑1 (MQ=255) aGTTAAGGCCGGGGCGTGTCAGACGACGGATGAAGCAAGAGACGATCGCCGCAGGGGCGATGCGATAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCTCAGCCa < 2:26541/143‑1 (MQ=255) ggtAAGGACCTGGCTTGTCGCGCGACGGATGAAGCAAGAGACGATCGCCGCAGGGGCGATGCGATAGCAGATTAACCCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAGACGGTCTCAGCCAg < 2:341597/141‑1 (MQ=255) aGGACGTCGCTTGTCAGACGACGGATGAAGCAAGAGACGATCGCCGCAGGGGCGATGCGATAGCAGATCATCTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGTATCCCGAATAAACGGTCTCAGCCAGTTaa < 2:782827/143‑1 (MQ=255) gACGTGGCTTGTCAGACGACGGATGAAGCAAGAGACGATCGCCGCAGGGGCGGTGCGATAGCAGAGGAACTCTTGTTCCCTTCGCAGGGATTAGCCTGATCAGGTGCCGCGGATCCCGAATAAACGGTCTCAGCCAGTTACgg > 1:119713/1‑143 (MQ=255) tCAGACGACGGATGAAGCAAGAGACGATCGCCGCAGGGGCGATGCGATAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCTCAGCCAGTTAAGGCACTCCGACaa > 1:539299/1‑143 (MQ=255) tCAGACGACGGATGAAGCAAGAGACGATCGCCGCAGGGGCGATGCGATAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCTCAGCCAGTTAAGACACTCCGACaa > 2:33224/1‑143 (MQ=255) aGACGACGGATGAAGCAAGAGACGATCGCCGCAGGGGCGATGCGATAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGCTCAGGTTCCGCGGATCCCGAATAAACGGTCTCAGCCAGTTAAGGCACTCCGACAAGa > 2:291636/1‑143 (MQ=255) cggcgGATGAAGCAAGAGACCAGCGCCGCAGGGGCGATGCGATAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAAt < 2:674856/140‑1 (MQ=255) gacgGATGAAGCAAGAGACGATCGCCGCAGGGGCGATGCGATAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATACCGAATAAACGGTCTCAGCCAGTTAAGGCACACCGACAAGaattc > 2:497437/1‑140 (MQ=255) gggATGAAGCAATGGACGGTCGCCGCATGGGCGATGCGATAGCAGATTAACTCTTGCTCCCTTCGCAGCTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAg < 2:773239/142‑1 (MQ=255) cgGATGAAGCAAGAGACGATCGCCGCAGGGGCGATGCGATAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAg > 1:294069/1‑143 (MQ=255) cgGATCAAGCAAGAGCCGATCGCCGCAGGGGCGCTGCGATAGCAGATTAACCCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAg < 1:716752/143‑1 (MQ=255) ggATGAAGCAAGAGACGCTCGCCGCAGGGGCGATGCGATAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGc < 2:36848/143‑1 (MQ=255) ggATGAAGCAAGAGACGATCGCCGCAGGGGCGATGCGATAGCAGATTAACTCTTGTTCCCTTCGCAGGTATCAGCCTGCTACGGTTCCACGGATCCCGAATAAACGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGc < 1:801102/143‑1 (MQ=255) gATGAAGCAAGAGACGATCGCCGCAGGGGCGATGCGATAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGcc > 1:558352/1‑143 (MQ=255) aaGCAAGAGACGATCGCCGCAGGGGCGATGCGATAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGc < 1:844556/143‑1 (MQ=255) aaGCAAGAGACGATCGCCGCAGGGGCGATGCGATAGCAGATTAACTCTTGTTACATTAGCAGGTATTAGCCTGATCAGATTACGCGGGTCCAGAGTTAACTGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGc > 1:312526/1‑143 (MQ=255) aGCAAGAGACGATCGCCGCAGGGGCGATGCGATAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCa > 2:577629/1‑143 (MQ=255) gCAAGAGACGATCGCCGCAGGGGCGATGCGATAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCaa > 1:770612/1‑143 (MQ=255) cAAGAGACGATCGCCGCAGGGGCGATGCGATCGCACATTAACTCTTGTTCCCTTCGCAGGTATTGGCCTGATCCGGTTCCGCGGATCCCGAATAAACGGTCTCCGCCAGGTAAGGCACTCCGGCACGCAATCAGCCCCCCacc > 2:253843/1‑141 (MQ=255) aggagaCGATCGCCGCAGGGGCGATGCGATAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGCTCAGGTTCCGCGGATCCCGAATAAACGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAAt < 2:538849/141‑1 (MQ=255) tggcGATCGCCGCAGGGGCGATGCGATAGCTGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGACCCCGAATAAACGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATggg < 2:753632/140‑1 (MQ=255) agaCGATCGCCGCAGGGGCGATGCGATAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATggg > 1:18071/1‑143 (MQ=255) gaCGATCGCCGCAGGGGCGATGCGATAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAACTAGCCCCGCAAATgggg > 2:108678/1‑143 (MQ=255) gaCGATCGCCGCAGGGGCGATGCGATAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCTAAGCCAGTTAAGGCACTGCGACAAGAAATTAGCCCAGCAAAAgggg > 1:341720/1‑143 (MQ=255) aCGATCGCCGCAGGGGCGATGCGATAGCAGATTAACTCTTGTTCCCTTCGCAGGTCTTAGCCTGATCAGGTTCAGCGGATCCCGAATAAACGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGc > 2:100341/1‑143 (MQ=255) gATCGCCGCAGGGGCGATGCGATAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCAt > 1:540536/1‑143 (MQ=255) aTCGCCGCAGGGGCGATGCGATAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCCACGGGGGCCtt > 2:480278/1‑143 (MQ=255) ctgcAGGGGGGATGCGATAGCGCAGGACCTCTTGTCCCCTTCGCAGGTACTAGCGTGTGCAGGTTGCGCGGATCCCGAAGACGCGGTCTCAGCCAGTGAAGGCACTCCGACAAGAAAGTAGCCCCGCAAATGGGGCATTGAAt < 2:328722/141‑1 (MQ=255) ccgcAGGGGCGATGCGATAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAAt > 1:605936/1‑143 (MQ=255) ccgcAGGGGCGATGCGATAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAAt < 1:307713/143‑1 (MQ=255) gcAGGGGCGATGCGATAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATCGAAtca > 2:557903/1‑141 (MQ=255) gcggggCGATGCGATAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGCTCCCCAATAAACGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTa < 1:284395/141‑1 (MQ=255) atgcgatAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATGAACGGTCTCAGCCAGTTAAGGCACTCCGACCAGAAATTAGCCCCGCACATGGGGCATTGTGCCTAAATTAcgc > 1:308934/1‑143 (MQ=255) gtAGGAGATTAACTCTTGCTGCCTTCCAAGGTATCAGCCTGATCAGGTGCCGCGGAGCCCGAATAAACTGTCCCAGCCAGTTAAGGCACGCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTaa < 2:79944/142‑1 (MQ=255) tAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCAACGAATGTGAATTACGCGtgagc > 1:792676/1‑139 (MQ=255) aGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACa < 1:639417/143‑1 (MQ=255) cAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAgc < 2:435458/143‑1 (MQ=255) aGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCTCATCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAgcg < 1:14804/143‑1 (MQ=255) gATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCTCAGCCAGTTAAGGCACTCCGACAGGAAATTAGCCCCGCAAAGGGGGCATTGAGTGTAAAGTACGCGTGACCGgcgc > 1:33852/1‑143 (MQ=255) gATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGATTGTCAATTACGCGTTATCCgcgc > 1:597803/1‑143 (MQ=255) aTTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCa < 2:518768/143‑1 (MQ=255) tAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCCTAGAGGGGAAATTCGACGATAACAGCGCAGa > 2:590780/1‑143 (MQ=255) aaCTCTTGTTCCCTTCGCCGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCTCAGCCAGTTGAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACCGCGCAgca > 2:19678/1‑141 (MQ=255) aaCTCTTGCGCCCGTCGCAGGTATGAGCCTGCTCAGGGTCCGCGGATCCCGAATAAACGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGaa < 2:237736/143‑1 (MQ=255) ttGTTCCCTTCGCAGGCATTAGCCTGATCAGGTTCCGCCGATCCCGAATAAACGCTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGCGCATTCAATGTAAATTACGCCTTAACAGCGCAGAACTCaa < 2:429317/143‑1 (MQ=255) gTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAACTCAAGc > 1:467729/1‑143 (MQ=255) ttCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCTCAGCCAGTTAAGGTACTCCGACAAGAAATTAGCCCCGCACATGGGGAACTGAATGTCAATTACGCGATAACAGCGCAGAACTCAAGCa > 2:290262/1‑143 (MQ=255) ttCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAACGGGGCACTGAATGCAAATTACGCGCTAACAGCGCAGCACACAAGCa > 2:226519/1‑143 (MQ=255) tCCCTTCGCAGGTATTAGCCTGATCAGGTGCCGCGGATCCCGAATAAACGGGCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAACTCAAGCAg < 1:682306/143‑1 (MQ=255) cccTTCGCAGGTAGTAGCCTGATCAGGTTCCGCGGATCCCGAAGAAACGGTCTCAGCCAGGTAAGGCACGCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAACTCAAGCAgg < 1:344908/143‑1 (MQ=255) ttCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCTCAGCCCGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCAGTGAATGTAAATTACGCGTTAACAGCGCAGAACTCAAGCAGGATg > 2:166389/1‑143 (MQ=255) tCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAACTCAAGCAGGATGt > 1:490572/1‑143 (MQ=255) aGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATGAGCCCCGCAAATGGGGCATTGAATGTACATTACGCGTTAACAGCGCAGAACTCAAGCAGGATGTTTgc > 2:764374/1‑142 (MQ=255) ggTGTTTGCCTGCTCAGGTTCCGCGGATCCCGAATTAACGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATGAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAACTCAAGCAGGATGTTTGAc < 2:241558/143‑1 (MQ=255) gTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAACTCAAGCAGGATGTTTGAcg > 2:780483/1‑143 (MQ=255) tATTGGCCTGATCAGGTGCAGCGGATCCCGAATAAACGGTCGCAGCCAGCTAAGGCACTCCGACAAGAAATCAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAACTCAAGCAGGATGTTTGAcgc < 1:462480/143‑1 (MQ=255) ttAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAACTCAAGCAGGATGTTTGACgcgg < 2:382641/143‑1 (MQ=255) aGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGACCTCAAGCAGGATGTTTGACgcgggc > 1:331976/1‑143 (MQ=255) aGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCCCAGAACTCAAGCAGGATGTTTGACgcgggc > 2:368635/1‑143 (MQ=255) gCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAACTCAAGCAGGATGTTTGACgcgggcg > 2:527328/1‑143 (MQ=255) cTGATCAGGTTCCGCGGATCCCGAATAAACGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAACTCAAGCAGGATGTTTGACGCGggcggc > 1:588279/1‑143 (MQ=255) cTGATCAGGTGCCGCGGATCCCGAATAAACGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAACTCAAGCAGGATGTTTGACGCGggcggc < 1:590780/143‑1 (MQ=255) tGATCAGGTTCCGCGGATCCCGAATAAACGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAAGAGCGCAGAACTGAAGCAGGATGTGTGGCGCGGgcggcg > 2:844429/1‑143 (MQ=255) | GGGTCAGTTTTGTTGCAGACATAGCTCATTCCAAAAAGTTAAGGACGTGGCTTGTCAGACGACGGATGAAGCAAGAGACGATCGCCGCAGGGGCGATGCGATAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAACTCAAGCAGGATGTTTGACGCGGGCGGCG > NC_000913/4196078‑4196359 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |