| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 568,268 | IS1 (–) +9 bp | intergenic (+21/‑39) | renD → / → emrE | DLP12 prophage; protein RenD/multidrug/betaine/choline efflux transporter EmrE |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 19796 = | NA (NA) | 28 (0.810) | 25/282 | 0.4 | 100% | noncoding (768/768 nt) | IS1 | repeat region |
| ? | NC_000913 | = 568276 | 0 (0.000) | intergenic (+29/‑39) | renD/emrE | DLP12 prophage; protein RenD/multidrug/betaine/choline efflux transporter EmrE | |||||
| * | ? | NC_000913 | = 258675 | NA (NA) | 37 (1.070) | 33/284 | 0.1 | 100% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | NC_000913 | 568268 = | 0 (0.000) | intergenic (+21/‑47) | renD/emrE | DLP12 prophage; protein RenD/multidrug/betaine/choline efflux transporter EmrE | |||||
AGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTAT‑CAATAAGTTGGAGTCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/19938‑19796‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cTACAGTTTGAACTCAACTCACCTGTTTCATCATTGTGTTCCCATTGATGTTCTTTTATATACCCTCAATACCCGTTTCATCGCGGCACTCTGGCGACACTCCTTAAAAATCAGATTCGTGCTCACCTTTCCT < NC_000913/568276‑568145 AGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTAT‑CAATAAGTTGGAGTCATTACC > 2:154682/1‑143AGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTAT‑CAATAAGTTGGAGTCATTACC > 1:564231/1‑143 CATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTCT‑CAATAAGTTGGAGCCATTACCTACAG > 2:232044/1‑143 ATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTAT‑CAATGAGTTGGAGTCATTACCTACAGT > 2:526729/1‑143 ccGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTAT‑CAATAAGTTGGAGTCATTACCTACAGTTTGAA < 2:485859/141‑1 CTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGCGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTAT‑CAATAAGTTGGAGTCATTACCTCCAGTTTGAA > 2:209621/1‑143 CTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACCAAGTCATCGGGCATTATCTGAACATAAAACACTAT‑CAATAAGTTGGAGTCATTACCTACAGTTTGAA > 2:225278/1‑143 CTGAAGCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTAT‑CAATAAGTTGGAGTCATTACCTACAGTTTGAA < 1:91413/143‑1 CTGAGGCAGCACCTGGCGCGGATGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTAT‑CAATAAGTTGGAGTCATTACCTACAGTTTGAACTCAAC < 2:98503/143‑1 tgtGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTAT‑CAATAAGTTGGAGTCATTACCTACAGTTTGAACTCAACT < 2:461247/140‑1 TGAGGCAGCACCTGGCACGGATGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAAC‑CTGTCCAATAAGTTGGAGGCATTACCGACAGTTTGAACTCAACT > 2:69056/1‑143 GCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGACCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTAT‑CAATAAGTTGGAGTCATTACCTACAGTTTGAACTCAACTCACC > 1:326326/1‑143 ACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTAT‑CAATAAGTTGGAGTCATTACCTACAGTTTGAACTCAACTCACCTGTTT < 1:208826/143‑1 ACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTAT‑CAATAAGTTGGAGTCATTACCTACAGTTTGACCTCAACTCACCTGTTACACTGTTGGGTTCCCA > 2:215700/1‑143 GGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTAT‑CAATAAGTTGGAGTCATTACCTACAGTTTGAACTCAACTCACCTGTTTCATCATTGTGTTCCCATT < 1:560037/143‑1 CGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTAT‑CAATAAGTTGGAGTCATTACCTACAGTTTGAACTCAACTCACCTGTTTCATCATTGTGTTCCCATTGATGTTCTTTTA < 2:92408/143‑1 TCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTAT‑CAATAAGTTGGAGTCATTACCTACAGTTTGAACTCAACTCACCTGTTTCATCATTGTGTTCCCATTGATGTTCTTTTGTATAC > 1:218712/1‑143 TCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTAT‑CAATAAGTTGGAGTCATTACCTACAGTTTGAACTCAACTCACCTGTTTCATCATTGTGTTCCCATTGATGTTCTTTTATATAC < 2:324117/143‑1 GGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTAT‑CAATAAGTTGGAGTCATTACCTACAGTTTGAACTCAACTCACCTGTTTCATCATTGTGTTCCCATTGATGTTCTTTTATATACCCTCAATA > 1:450852/1‑143 CATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTAT‑CAATAAGTTGGAGTCATTACCTACAGTTTGACCTCAACTCACCTGTTTCATCAGTGTGTTCCCATTGATGTTCTTTTATATACCCTCAATACCCGTTTCAT > 2:131350/1‑143 GACAAAGTCATCGGGCATTATCTGAACATAAAACACTAT‑CAATAAGTTGGAGTCATTACCTACAGTTTGAACTCAACTCACCTGTTTCATCATTGTGTTCCCATTGAGGTTCTTTTATATCCCCCCAAGACCCGTTTCATCGC > 1:574409/1‑143 GACAAAGTCATCGGGCATTATCTGAACATAAAACACTAT‑CAATAAGTTGGAGTCATTACCTACAGTTTGAACTCAACTCACCTGTTTCATCATTGTGTTCCCATTGACGTTCTTTTATATACCCTCAATACCCGTTTCATCGC > 2:341128/1‑143 GGCATTATCTGAACATAAAACACTAT‑CAATAAGTTGGAGTCATTACCTACAGTTTGAACTCAACTCACCTGTTTCATCATTGTGTTCCAATTGATGTTCTTTTATATACACCAAATACCCACTTCATCGCGGCACTCTGGCGA > 2:252155/1‑143 GCATTATCTGAACATAAAACACTAT‑CAATAAGTTGGAGTCATTACCTACAGTTTGAACTCAACTCACCTGTTTCATCATTGTGTTGCCATTGATGTTCTGTTATATACCCTCAATACCCGTTTCATCGCGGCACTCTGGCGAC < 2:580395/143‑1 ATTATCTGAACATAAAACACTAT‑CAATAAGTTGGAGTCATTACCTACAGTTTGAACTCAACTCACCTGTTTCATCATTGTGTTCCCCTTGATGTCCTTTTATATACCCTCAATACCCGTCTCATCGCGGCACTCTGGgcgcac > 2:10160/1‑137 CTGAACATAAAACCCTAT‑CAATAAGTTGGAGTCATTCCCTACAGTTTGAACTCAACTCACCTGTTTCATCATTGAGTTCCCATTGATGTTCTTTTATATACCCTCAATACCCGTTTCATCGCGGCACTCTGGCGACACTCCTT < 1:613184/143‑1 TAAAACACTAT‑CAATAAGTTGGAGTCATTACCTACAGTTTGAACTCAACTCACCTGTTTCATCATTGTGTTCCCCTTGATGTTCTTTTATATACCCTCAATACCCGTTTCATCTCCGCACTCTGGCTCCACACCTTAAAAATa > 1:55618/1‑142 ACTAT‑CAATAAGTTGGAGTCATTACCTACAGTTTGATCTCAACTCACCTGTTTCATCATTATATTCACATTGATGTTCTTATATATACCCTCAATACCCGTTTCTTAATGACACTCTGGCGACACTCCTTAAAAATCAGATTC > 1:317342/1‑143 CTAT‑TAATCAGTTGGAGTCATTACCGACAGTTTGAACTCATCTCACCTGTTTCATCATTGTGTTCCCATTGATGTTCTTTTATATACCCTCAATACCCGTTTCATCGCGGCACTCTGGCGACACTCCTTAAAAATCAGATTCG < 2:322457/143‑1 GAGTCATTACCTACAGTTTGAACTCAACTCACCTGTTTCATCATTGTGTTCCCATTGATGTTCTTTTATATACCCTCAATACCCGTTTCATCGCGGCACTCTGGCGACACTCCTTAAAAATCAGATTCGTGCTCACCTTTCCT < 1:321413/143‑1 AGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTAT‑CAATAAGTTGGAGTCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/19938‑19796‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cTACAGTTTGAACTCAACTCACCTGTTTCATCATTGTGTTCCCATTGATGTTCTTTTATATACCCTCAATACCCGTTTCATCGCGGCACTCTGGCGACACTCCTTAAAAATCAGATTCGTGCTCACCTTTCCT < NC_000913/568276‑568145 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |