New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4295980 =NA (NA)3 (0.130) 3/250 NT NA noncoding (32/37 nt) other REP321c
?NC_000913 4296062 = NA (NA)noncoding (1/37 nt) other REP321e

AGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTAT  >  NC_000913/4295920‑4296201
                                                                                                                                              |                                                                                                                                           
aGGCGTTTATGCCGGATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGc                                                                                                                                             <  1:357667/143‑1 (MQ=17)
  gCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTGCGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTAGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACGTCAACGGCt                                                                                                                                           >  1:405/1‑143 (MQ=11)
  gCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCt                                                                                                                                           >  1:411723/1‑143 (MQ=32)
   cgctcaTGCCGCAGCCGACATCAACGCCGGCTGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTg                                                                                                                                          <  2:276735/138‑1 (MQ=255)
    gTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCACCGcccgg                                                                                                                                         >  2:221095/1‑140 (MQ=17)
     tttATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGAt                                                                                                                                        >  2:103314/1‑143 (MQ=17)
     tttATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGAt                                                                                                                                        <  1:96221/143‑1 (MQ=32)
         tGCCGCATCCGACATCAACGCCTGATGTGACGCTTAACGCTTCTTATCAGGCTTACGCCAGATAGCGCAATAGCCTGATTTAGCGTGAGTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGa                                                                                                                                    <  1:95581/143‑1 (MQ=11)
          gCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGAc                                                                                                                                   >  1:326727/1‑143 (MQ=17)
            cGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATCAGGCGTTTACGCCGCATCCGACAGCCATGCCTGAGGCGACGc                                                                                                                                 >  2:407597/1‑143 (MQ=11)
            cGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTATGTAGGTCGGATAAGGCGTTAACGCCACATCCAACATCAATGCCTGATGCGACGc                                                                                                                                 >  1:440425/1‑143 (MQ=11)
            cGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTGATCAGGCCTACGCCAGACAGCGCAATAGCCTGCTTTAGCGTGATTTTGTAGGTCGGATCAGGCGTTTACGCCGCATCCGACATCAATCCCTGCTGcgccgc                                                                                                                                 >  2:426945/1‑143 (MQ=11)
                 ccGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGcc                                                                                                                            >  1:343148/1‑143 (MQ=34)
                   gACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCTTACGTCATTCTGCGTAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCcgc                                                                                                                          <  1:42542/143‑1 (MQ=11)
                   gACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCcgc                                                                                                                          >  2:150063/1‑143 (MQ=25)
                     cATCACCGCCTGACGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATGTAGCGTGATTTTGTACGGCGGATAAGGCGTTTACACCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGt                                                                                                                        <  1:84142/143‑1 (MQ=11)
                      ttcactgCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCTTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTc                                                                                                                       <  1:371336/137‑1 (MQ=255)
                      actgaCGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTc                                                                                                                       <  2:210834/139‑1 (MQ=38)
                       tCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCt                                                                                                                      >  2:105975/1‑143 (MQ=25)
                       tCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCt                                                                                                                      >  2:362751/1‑143 (MQ=38)
                        cAACGCTTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCtt                                                                                                                     <  2:172274/143‑1 (MQ=38)
                        cAACGCCTGATGCGACGCTTACCGCGTCTTGTCAGGCCTACGCCAGACTGCCCAATAGCCTCATTTAGCGTGATTTTGTAGGTCGGATAAGGCCTTTTCGCAGCATATGTCATCAATCCCTGATGCGACGCTGGCCGCGTCtt                                                                                                                     <  2:343148/143‑1 (MQ=11)
                         aaCGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCATGATTTCACGTGATTTTGTAGGTCGGATAAGGAGTTTACGCCGCATCCGACATCCATGCCTGATGCGACACTTGCcgcgacgta                                                                                                                    >  2:369230/1‑138 (MQ=11)
                            gcctgataagacgcgttaagcgtcgcatcaggCCTACGCCAGACAGCGCAATAGCCTGATGTAGCGTCATTTTGTAGGTCGGATAAGGCGTTTACGCCGCCTCCGACATCAACCCCTGATGCGACGCTAGCCgcgtctagtcc                                                                                                                 <  2:150790‑M1/111‑6 (MQ=255)
                            gCCTGACGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGAGACGCTTGCCGCGTCTTATCa                                                                                                                 <  2:428417/143‑1 (MQ=255)
                             ccTTATGCGACGCTTAACGCGTCTTATCAGGTCTATGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAg                                                                                                                <  1:45533/143‑1 (MQ=255)
                             ccTGATGCGACGCTTAACGCGTCTTATCAGGCTTACGCCAGACAGCGTAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGGCATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAg                                                                                                                <  1:238358/143‑1 (MQ=255)
                                  tGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTa                                                                                                           >  1:280656/1‑143 (MQ=25)
                                  tGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTa                                                                                                           >  2:188929/1‑143 (MQ=21)
                                   gctccGCTTGCCGCGTCTTATGAGGCCTACGCCAGCCACCGCAATAGCCTGATTTAGCGTTATTTTGTAGTTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTAc                                                                                                          <  2:337938/139‑1 (MQ=11)
                                   gCGACGCTTGACGCGTCTTATCAGGCCTACGCCAGACTCTGCAATAGTCTGATTTTGCGTGTTTTTGTAGGTCGGATAAGGGGTTTACGCCGCAAACGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTAc                                                                                                          <  1:310507/143‑1 (MQ=14)
                                   gCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTTATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTAc                                                                                                          <  1:75083/143‑1 (MQ=38)
                                   gCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCATCTTCTCAGGCCTAc                                                                                                          >  1:195538/1‑143 (MQ=255)
                                     gACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGa                                                                                                                                         >  2:169398/1‑110 (MQ=18)
                                     gACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGa                                                                                                                                         <  1:169398/110‑1 (MQ=18)
                                     gACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGa                                                                                                                                         <  1:390865/110‑1 (MQ=18)
                                     gACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTatct                                                                                                        <  1:362751/143‑4 (MQ=17)
                                     gACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGa                                                                                                                                         >  2:390865/1‑110 (MQ=33)
                                     gACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCCACGc                                                                                                        >  2:486703/1‑143 (MQ=37)
                                     gACGCTTAACGCGTCTTAGCAGGCCTAGTTCAGCCAGCGCGATTGCCTGATTTAGCGTGACTTTGCAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTatct                                                                                                        <  2:411723/143‑4 (MQ=11)
                                        gCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACTCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGAGCCTCATCAGGCCTACGACac                                                                                                     >  2:169293/1‑142 (MQ=11)
                                         ctgcaCGCGGCTTATCAGGCCTACGCCAGACAGCGCAATAGCCGGATTTAGCGTGATTTTGTAGGGCGGACAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGa                                                                                                    <  2:444506/139‑1 (MQ=14)
                                         cTTTACGCGTCTTATGATGTCTACGTGTGACGGCACAATAGCCGGAGTTAGTGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGa                                                                                                    <  2:248918/143‑1 (MQ=11)
                                           tAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGcc                                                                                                                                            >  1:371711/1‑101 (MQ=33)
                                            aaCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGc                                                                                                              >  1:432615/1‑130 (MQ=25)
                                            aaCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGc                                                                                                              <  2:432615/130‑1 (MQ=25)
                                                       tcaggCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATACGGCGTTTATGCCGCATCCGACATCAACGCCTAGTGCGACGCTTGGCGCGACTGATCAGGACTGCGCCGGaccgcgcagtcgccg                                                                                      <  2:143442‑M1/138‑8 (MQ=255)
                                                       tcaggCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACg                                                                                                                                  >  2:487795‑M1/6‑99 (MQ=255)
                                                             cTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTGACCGCGTCTTATCAGGCCTACGCCAGCCGGCGCAATCGCATgggaca                                                                                >  2:493494/1‑138 (MQ=11)
                                                                     gACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATc                                                                                                                  <  2:45881/101‑1 (MQ=38)
                                                                     gACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATc                                                                                                                  >  1:45881/1‑101 (MQ=255)
                                                                        aGCGCCATAGCCTGATTTAGCGTGATTTGGTATGTCGGATAAGGCGTGTACGCCGCATCCCACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCTTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTg                                                                     <  2:332778/143‑1 (MQ=11)
                                                                         gcgcAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAACCAGCGCAATAGACTGATTTAGCGTGAtgttgt                                                                    >  1:430597/1‑143 (MQ=255)
                                                                            cAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTCCGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAAACAGTGCTATAGCCTAATTTAGCGTGCTTCTGTact                                                                 >  1:69105/1‑141 (MQ=11)
                                                                                  ccTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGCCAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGAt                                                           >  1:348702/1‑143 (MQ=38)
                                                                                  ccTGATTGAGCGTGATTTTGTGGGGCGGTTAAGGGGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGAt                                                           <  2:231922/143‑1 (MQ=11)
                                                                                   cTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATCTTGTCGGTCGGATa                                                          >  1:266191/1‑143 (MQ=255)
                                                                                    tGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATaa                                                         <  1:105798/143‑1 (MQ=37)
                                                                                            cGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCt                                                                                                            >  2:361803/1‑84 (MQ=255)
                                                                                             gTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGACAGACAGAACAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTAt                                                >  1:302311/1‑143 (MQ=255)
                                                                                              tGATTTTGTCGGTCGGGCAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATg                                               <  2:8183/143‑1 (MQ=255)
                                                                                              tGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGCTTTCGCGTCATTTTGTAGGTCGGATAAGGCGTTTATg                                               >  2:205677/1‑143 (MQ=255)
                                                                                                 ttttGTGGTGCGTATAAGGCGTTTACACCCCATCCGACATGAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCg                                            <  2:62807/143‑1 (MQ=11)
                                                                                                 ttttGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGCCAGCGCAATAGCCTGCTTTATCGTGATTTTGTAGGTCGGATAATGCGTTTATGCCg                                            >  1:276638/1‑143 (MQ=255)
                                                                                                 ttttGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAACGCAATAGACTGATTTAGCGTGATTTACTTCGTCGCATAAGACGTTTATGCCg                                            >  1:43428/1‑143 (MQ=11)
                                                                                                  tttGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCACGTCTTATCAGGCCTACAACAGACAAAGAAATAGCAAGATTTAGCGTGATGTTGTACGTCGGATAAGGCGTTTATGCCga                                           >  1:684/1‑142 (MQ=11)
                                                                                                       gggtgtgATTAGGCGTTTACTCCGCATCCTACATGAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCg                                      <  2:145631/137‑1 (MQ=14)
                                                                                                         gTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAACGCGTTTATGCCGCATCCGAc                                    >  2:334944/1‑143 (MQ=255)
                                                                                                          tCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACa                                   >  2:176555/1‑143 (MQ=38)
                                                                                                          tCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACa                                   >  2:200930/1‑143 (MQ=38)
                                                                                                            tgacacggCGTTTCCGCCGCGTCCGACGTCAACGCCTGACGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATc                                 <  2:325563/137‑1 (MQ=11)
                                                                                                            ggATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTCTGTAGGTCGGATAAGGCGCTTATGCCGCATCCGACATc                                 >  1:454109/1‑143 (MQ=255)
                                                                                                             gATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCACTAGCCTGATTTAGCGTGATTTTATAAGTCGGACAAGGCGTTAATACAGCATCCGACCTCa                                >  1:84534/1‑143 (MQ=11)
                                                                                                               tAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCAGCGACTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGCATAAGCGTCACTCTGTGGGTCGGATCAGGCGTCTATGCCGCCTCCCACATAAAc                              >  2:203102/1‑143 (MQ=14)
                                                                                                                aaGGCGTTTACGCCTCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGCTTTAGCGTGATTCTGTAGGTCGGACAAGGCGTTTGTGCCGCCTCCGACAACAGCg                             >  2:204655/1‑143 (MQ=14)
                                                                                                                   gCGTGTACGCTGCATCCGGCATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCt                          <  2:78585/143‑1 (MQ=255)
                                                                                                                             cgcATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATGTTGTAGGTCGGATAAGGCGGTGATGCTGCCGCCGACCGCAACGCCCTATGCGACGc                >  2:374998/1‑143 (MQ=11)
                                                                                                                                       aTCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGCTGCGACGCTTCACGCGTc      >  1:378279/1‑143 (MQ=21)
                                                                                                                                         cAACGCCTGATGCGACGCTTGCCGCGTCTTCTCACGCCTACGCCAGACAGCGCAATAGCCTGACTTAGCCCGCCTTTCTATGTCGCATAATGCGTTTATGCCGCATCCAACAACAACACCTGATCCGACGCTTAACGCGTcat    >  1:19146/1‑141 (MQ=11)
                                                                                                                                         cAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTACCGCGTCtt    >  2:233921/1‑143 (MQ=17)
                                                                                                                                         cAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCtt    >  2:238980/1‑143 (MQ=32)
                                                                                                                                          aaCGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTGTGCCGCATCCGACCTCACCCCCTGATGCGCCGCTTGATACGTCTTa   >  1:290955/1‑143 (MQ=11)
                                                                                                                                          aaCGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTa   >  1:278894/1‑143 (MQ=32)
                                                                                                                                           aCGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGCTAAGGCGTTTATGCCGCATCCGCCATCAACGCCTGATGCGACACTTACCGCGTCTCAt  >  1:302141/1‑143 (MQ=11)
                                                                                                                                           aCGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCCGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCACATCAGACATCAACAACTGATGCGACTCTCAACGCCTCttct  >  1:43182/1‑141 (MQ=11)
                                                                                                                                              |                                                                                                                                           
AGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTAT  >  NC_000913/4295920‑4296201

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.