| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,486,157 | A→C | 100% | E13A (GAA→GCA) | crp → | DNA‑binding transcriptional dual regulator CRP |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,486,157 | 0 | A | C | 100.0% | 66.3 / NA | 22 | E13A (GAA→GCA) | crp | DNA‑binding transcriptional dual regulator CRP |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base C (13/9); total (13/9) | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
AGTTGATAGCCCCTTCCCAGGTAGCGGGAAGCATATTTCGGCAATCCAGAGACAGCGGCGTTATCTGGCTCTGGAGAAAGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGTGCTGATCAAAGACGAAGAGGG > NC_000913/3486017‑3486289 | aGTTGATAGCCCCTTCCCAGGTAGCGGGAAGCATATTTCGGCAATCCAGAGACAGCGGCGTTAGCTGGCTCTGGAGAAAGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGCAt < 2:244545/143‑1 (MQ=255) gcccAGGTAGCAGGAAGCATAGGGCGGCAAGCCAGAGGCCGAGGGGTTACCGTGCTCCGAAGAAAGGAAATAATCGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGCATGGTTCTTGTCTCAt < 1:203247/142‑1 (MQ=255) cccAGGTAGCGGGAAGCATATGTCGGCAATCCAGAGACAGCGGCGTTATCTGGCTCTGGAGAAAGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGCATGGTTCTTGTCTCAtt < 2:483077/143‑1 (MQ=255) aGCATATTTCGGCAATCCAGAGACAGCGGCGTTATCTGGCTCTGGAGAAAGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGCATGGTTCTTGTCTCATTGCCACATTCATAAg > 1:264269/1‑143 (MQ=255) gcaTCAAGAGACAGCGGCGTGATCTGGCTCTGGAGAAAGCTTATACCAGAGGATAACCGCGCATGGTGCTTGGGAAACCGCAAACAGACCCGACTCTCGCATGGTTCTTGTCTCATTGCCACATTCATAAGTACCCATCCAag < 2:396657/141‑1 (MQ=255) cAGAGACAGCGGCGTTATCTGGCTCTGGAGAAAGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGCATGGTTCTTGTCTCATTGCCACATTCATAAGTACCCATCCAAGAGCAc > 1:195698/1‑143 (MQ=255) aGCGGCGTTATCTGGCTCTGGAGAAAGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGCATGGTTCTTGTCTCATTGCCACATTCATAAGTAACCATACAAGAGCACGCTTAtt > 1:10241/1‑143 (MQ=255) ttATCTGGCTCTGGAGAAAGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGCATGGTTCTTGTCTCATTGCCACATTCCTAAGCACCCATCCAAGAGCACGCTTATTCACAAgg > 1:81135/1‑143 (MQ=255) ggCTCTGGAGAAAGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGCATGGTTCTTGTCTCATTGCCACATTCATAAGTACCCCTCCAAGAGCACGCTTATTCACCAGGGTGaaa > 2:332047/1‑143 (MQ=255) tGGACAAAGCTTATAACAGACAATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCACGCATGGTTCTTGTCTCATTGCCACATCCATAAGTACCCATCCAAGAGCACACTTCTTCCCCCGAGTCAACAAGCg > 2:428326/1‑143 (MQ=255) gagaAAGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGCATGGTTCTTGTCTCATTGCCACATTCATAAGTACCCATCCAAGAGCACGCGTATTCACCAGGGTGGAAAAGCGGa > 1:427244/1‑143 (MQ=255) aaCAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGCATGGTTCTTGTCTCATTGACACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGGAAAAGCGGAAACGCTGtacta > 1:144921/1‑143 (MQ=255) gcATGGTGCTTGGCAAACCGCAAACAGTCTCGACTCTCGCATGGTTCTTGTCTCATTGCCACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGctct < 2:277633/143‑1 (MQ=255) aTGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGCATGGTTCTTGTCTCATTGCCACATTCATAAGTACCCATCCAAAAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCtgt > 1:244449/1‑143 (MQ=255) ggCAAACCGCAAACAGACCCGGCGCTCGCATGGTTCTTGTCTCATTGCCACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGTGCt < 1:196137/143‑1 (MQ=255) gCAAACCGCAAACAGACCCGACTCTCGCATGGTTCTTGTCTCATTGCCACATTCATAAGTACCCATCCAAGAGCCCGCTTATTCACCAGGGTGAAAAAGCGGACACGCTGTACTAGATAGTTAAAGGATATGTCGCAGtcatg > 2:351197/1‑139 (MQ=255) cAAACCGCAAACAGACCCGACTCTCGCATGGTTCTTGTCTCATTGCCACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGTGCTGa < 1:389933/143‑1 (MQ=255) aaaCCTCAAACAGTCCCTACTCCTGCATGGTTCTTGTCTCATTGCCACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGTGCTGAt < 1:298908/143‑1 (MQ=255) cAAACAGACCCGACTCTCGCATGGTTCTTGTCTCATTGCCACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACAAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCGCTGTGTCAGTGCTGATGAAAGa > 2:394581/1‑143 (MQ=255) aaCAGACCCGACTCTCGCATGGTTCTTGTCTCATTGCCACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGTGCGGATCAAAGACg > 1:126701/1‑143 (MQ=255) gacccgacccTCGCATAGTTCTTGTCTCATTGCCACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGTGCTGATCAAATACGAaga < 2:455264/143‑1 (MQ=255) ccGACTCTCGCATGGTTCTTGTCTCATTGCCACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCCGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGTGCTGATCAAAGACGAAGAggg > 1:206118/1‑143 (MQ=255) | AGTTGATAGCCCCTTCCCAGGTAGCGGGAAGCATATTTCGGCAATCCAGAGACAGCGGCGTTATCTGGCTCTGGAGAAAGCTTATAACAGAGGATAACCGCGCATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGTGCTGATCAAAGACGAAGAGGG > NC_000913/3486017‑3486289 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |