| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC JC | NC_000913 | 1,979,486 | IS5 (+) +4 bp | 100% | intergenic (‑271/‑264) | insA‑5 ← / → uspC | IS1 protein InsA/universal stress protein C |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1979486 = | 0 (0.000) | 28 (1.000) | 27/264 | NT | 100% | intergenic (‑271/‑267) | insA‑5/uspC | IS1 protein InsA/universal stress protein C |
| ? | NC_000913 | 2101749 = | NA (NA) | noncoding (1195/1195 nt) | IS5 | repeat region | |||||
| * | ? | NC_000913 | = 1979489 | 0 (0.000) | 34 (1.210) | 30/264 | NT | 100% | intergenic (‑274/‑264) | insA‑5/uspC | IS1 protein InsA/universal stress protein C |
| ? | NC_000913 | = 2290113 | NA (NA) | noncoding (1/1195 nt) | IS5 | repeat region | |||||
GAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1979352‑1979489‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTT < NC_000913/2290113‑2289972 GAAACAGTAATAATCGAAATGAGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAGGAAG < 1:490833/143‑1 AGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATCATCACTTTCATGCAATCCCAGATAAGCTATTTTTAAACAGACACTTACAGCACAACAAAATAAAGAAGATGCG > 1:181228/1‑143 TCGAAATGGGATGTTGCGCACAGTCAAAATAAATAACCGTAAATAATCATCTGCTATAAATAATCACTTTCACGCAATACCAGATAAGCTCTTTTTAAACAGACAATTACCGCACAACAAACTAAGGAAGGTGAGTACAAGac > 2:147856/1‑141 ATGGGATGTTGCGCACAGTGAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAGGAAGGTGCGAACAAGTCCCTGA < 1:388643/143‑1 GGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTCAACAGCCACTTACCGCACAACAAACTAAGTAAGATACGAACACGTCCCTGATAT > 2:241739/1‑143 CAGTCAAAATAACTTACCGTAAATTATCATTTGTTATAAATAATCACTTTGATGCAATACCAGATAAGCTATTGTTAAACAGACACTTACCGCACAACAAACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTT < 1:565810/143‑1 tAAAATAACTAACCTGAAATGATCATCTGCTATAAATGATCACGTTCATGCAATACCAGATAAGCTAGTTTTGAACAGACACTTACCGTAGAACAAACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCA < 2:55312/142‑1 ACTCACCGTAAAGAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAAAACACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAG < 1:103284/143‑1 CTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACATACCGCACAACAAACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGC < 2:512169/143‑1 TCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAGAAAAATGCAAACAAGTCACTGATATGAGATCATGTTTGTCATCTGGAGCC > 1:30289/1‑143 CACCGTAAATTATCATCTGTTATAAATCAACACTCTCATGCAATACCCGATAATCTATTTTTAAACAGACACTTACCGCACAACAAACTAAGGAAGGTGCTAACAAGTCCCTCATATGAGATCATGTTTGTCATCTGGAGCCA < 2:142955/143‑1 TAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAAAAAACACTTACCGCACAACAAACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAA < 1:343051/143‑1 AATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAGGAAGGTGAGAAAAAGTACATGATATGAGATCATGTTTGTCATCTGGAGCCATAGAAAAGGG > 1:81398/1‑143 gGCTATAAATAATCAATTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTAACGCACAACAAACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGCAACCATAGAACAGGGGTCATCA > 2:484356/2‑143 TATAAACAATCACATGCATGCAATACCAGATAAGCTATGTTTAAACAGACACTTACGGTTCAACAAACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGA < 1:18053/143‑1 TCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAATGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATTTGGAGCAATAGAACAGGGTTCATCATGAATCATCAAC > 1:106284/1‑143 TCACTTTCATGCAAGAGCAGATAGGCTATTTTTAATTAGATACTTATCGCACAACAAACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAAC < 1:188024/143‑1 CACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAGGAAGGTACGAAAATGTACCGCAAATGAGATGACGTTAGTCATCTGAAGCCATAGAACAGGGTTCATCATGAGTCATCAACT > 2:245598/1‑143 TTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCAATATAACAGGGTTAATCATGAGTAATCAAATTAC > 2:580541/1‑143 agGCAATCCCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTC < 2:120479/141‑1 ATGCAATACCATATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGCCCAATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTC < 1:581701/143‑1 ATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCGGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTC < 2:459771/143‑1 GCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTATGGAAGGTTCGAACAAGTCCCTGATATGATATCATGTTTGTCATCTGGAGCCATAGAACAGAGTACATCATGAGTCATCAACTTACCTTCGC > 1:17630/1‑143 GATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAGGAAGGTGCGAACAAGTCCCTGATATAATCTCCTGTTTCTCATCTAGAACCATACAACAGAGTTCATCATGAATCATAAACTTACCTTCGCCGACAGTGA > 1:566849/1‑143 AAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATT < 1:298260/143‑1 AGCTATTTTGAAACAGACACTCACCGCACAACAAACTAAGGAAGGTGCGAAGAAGTGCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTC < 2:303487/143‑1 GCTATTTTTAAACAGACACTTACCGCACAACAAACTAAGGAAGGTGCGAACAAGGCCCTGATATGAGATCATCTTTCTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCAACAGTGACTTCA > 1:290798/1‑143 TATTTTTAAACAGACACTTACCGCACAACAAACTAAGGAAGTTGCGAACAAGTCCCTGATATCAGATCATCTTTGTCATCTGGAGCCATACAACAGGGTTCATCATGAGTCATCAACTTACCATCGCCGACAGTGAATACAGC > 2:106075/1‑143 ATTTTTAAACAGACTCTTACCGCACAACAAACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCA < 1:116483/143‑1 TTAAACAGACACTTACCGCACAACAAACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGTACGGGTTTCATCATGAGACATCAACTTACATTAATCGAAAGAAAATTCAGCAGTAA > 1:131707/1‑143 TTAAACAGACACTTACCGCACAACAAACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGACATAAACATACCTTCGCAAACAGTGAAGTAAGCAGTAA > 1:353866/1‑143 ACAGACACTTACCGCACAACAAACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTAATAAAGTTGCCTTCACCGACAGTGAATTCAGCAGTAAGCGC > 1:384929/1‑143 CAGACACTTACCGTACACCTAACTAAGGAAGGTGCGAATAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCC < 1:113298/143‑1 AACAAACTAAGGAATGTGCGAATAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGA < 1:419585/143‑1 AAACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATAAAGATTGTCATCTGGAGGCATAGAACAGGAGTCATCATGAGTAATCAAATTACCTTCGCCGACAGAGAATTCAGCAGAAAGCGCCGTCAGACCAGAAAAGAGAT > 2:168920/1‑143 ACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTT > 1:318127/1‑143 TAAGGAAGGTTCTAACAAGTCCCTGATATTAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTC < 1:482386/143‑1 TAAGGAAGGTGCGAACAAGTCCCTGATATGCGATCATGTTTGTCCTCTGGATCCATAGACCAGGATTCATCATGAGTCATCAACTTACATTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAACAGCTTTTC > 1:492565/1‑143 TAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACGTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTC < 1:265624/143‑1 TAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATCCGTCATCAACTTACCTTCGCCGACAATGAATTCAGCAGTAAGCGCCAACAGACCAGAAGAGAGATaatc > 1:506223/1‑139 AAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCT > 2:158790/1‑143 AGGTAGGTTGGAACAAGTCGCTGATATGAGGTCATGTTTGTCATCTGGAGCGATAGATTCGGGTTCATCATGAGTCATCGACTTACCTTCGCCGACAGTGTATTCTGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTT < 2:223003/143‑1 AGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTATCATCTGGAGCCATCGAAGAGGGTTCATCGTGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTATGCGCCGTCAGAACAGAAAAGAGCATTTCTT > 2:28687/1‑143 GAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1979352‑1979489‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTT < NC_000913/2290113‑2289972 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |