Predicted mutation
evidence seq id position mutation freq annotation gene description
MC JC NC_000913 3,815,859 Δ82 bp 100% [rph] [rph]

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 3815859 3815940 82 48 [0] [1] 50 [rph] [rph]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 38158580 (0.000)43 (1.660) 38/244 NT 100% intergenic (‑90/+5) pyrE/rph orotate phosphoribosyltransferase/truncated RNase PH
?NC_000913 3815941 = 0 (0.000)coding (609/687 nt) rph truncated RNase PH

CCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3815707‑3815858
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCT  >  NC_000913/3815941‑3816082
                                                                                                                                                                                                                                                                                                       
CCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGGTATGGTTTCATTCCTTCGCTCATCATCTTACTATTCTACAAACAAAAAAAAAGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCC                                                                                                                                                         >  1:167378/1‑143
       TTAACACGTGCTTGTTAAGCGCAAATTCAATAAACTGGCGTTGATATGTTTTCATGCCTTCTCTCCTCATCTTACGTATCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCT                                                                                                                                                  <  1:45744/143‑1
       TTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCGTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCT                                                                                                                                                  <  2:518475/143‑1
       TTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCATCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTCAAAATCAGTTTGCCAGAGCCGCATTCT                                                                                                                                                  >  2:213049/1‑143
          ACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCC                                                                                                                                               <  1:193696/143‑1
               TGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCC                                                                                                                                          <  2:152091/143‑1
                  TTGTTAAGCGAAAATTCAATAATCTGGCGCTGATATGGTTTCATGCCTTCGCTCTTCATCTTACTTTTCAACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTG                                                                                                                                       <  1:502416/143‑1
                     CTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTATCTACAAACAAAAAAAAAAAGACAAATCAATCACCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCAC                                                                                                                                    >  1:508910/1‑143
                       AAGCGCAAATTCAATAAACTGGCGCTGAAATAGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAATCACCTTAAAAATCAGTTTGCAAGGGCCGCCATCTGCCGTACACTGGACTT                                                                                                                                  >  2:6019/1‑143
                                  CAATAAACTGGCGCTGATATGGTTTCATGTCTTCGCTCTTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACGCATCAGTCGACTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGC                                                                                                                       <  1:186629/143‑1
                                   AATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCg                                                                                                                      >  1:260845/1‑142
                                     TAAACTGGCGCTGATATGTTTTCATGTCTTCGCTCCTCATCTTACAGTTCTACAGACAAAAAAAAGGCGACGCAGCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCG                                                                                                                    <  1:162289/143‑1
                                           GGCGCTGAGATGGCTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCG                                                                                                              <  2:472895/143‑1
                                             CGCTGATATGGTTTCATGCCTTCGCTTCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGT                                                                                                            <  1:9530/143‑1
                                             CGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTTCATACAATATATAGGCGTCTCATCAGTCGCCTTAAAAATCAGGTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGT                                                                                                            <  1:19590/143‑1
                                                     TGGTTTCATGCCTTCGCTCCTATAGTTGCGTGTCGACAGACATAAAAAATGTGTCTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTA                                                                                                    <  1:513875/143‑1
                                                        TTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCAACAGTCGGCTTAAAAATCAGTTTGACAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCACGACTTCGGTCACCACTcctg                                                                                                 >  2:508540/1‑139
                                                          TCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAACAAGGCGACTCATCAGTCGCCTTAAAAATCCGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTACACTTCAATGATGCGCCCGTCCTCGGACCTCACCACGccc                                                                                               >  2:173696/1‑140
                                                              gcgTTCGCTGCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCAGCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGT                                                                                           <  2:143850/140‑1
                                                                CTTCGCTCCTCATCTTACTTTTATACAGACAAAATAAAGGCGTTTCATCAGTCGCCTTAAAAATCAGTTGGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAAGGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCG                                                                                         <  1:192095/143‑1
                                                                 TTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTCACAAAAAAATAACCAACGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATACACCCGTCTTCGATCATCACTACGTTCATGTCGG                                                                                        >  1:75576/1‑143
                                                                      TCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCACTGATGCGCCCGTCTTCGCTCATCCCCACGCTCATGGCGCTCcca                                                                                   >  2:327426/1‑140
                                                                        CTCATCTTACTTTTCTATTTACAAAAAAAAGGCTACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGC                                                                                 <  1:364390/143‑1
                                                                         TCATCTTACTTTTCTACAGACAAAAAAAAGGCTACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCG                                                                                <  1:394072/143‑1
                                                                                 ccTTTCTACGGACGAAAAAAAGGCGACTCACGAGGTCGACCAGAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCTCTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTC                                                                        <  2:112284/141‑1
                                                                                  TTTTCTACAGACAAAAAAAAGGCGACTCATCGGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTTCCCTGCACTTCAATCATGCGCCCGACTTCGGTCATCACTACGTCCATGACGGACTCTGCGGCAGAGACT                                                                       >  1:441736/1‑143
                                                                                  TTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATTATGCGCCCGTCTTGGGCCACCACCACGTTCATTTCGGTCCCTGCGGCAGAGTCT                                                                       >  2:243639/1‑143
                                                                                    TTCTACATACTAAAGAAAGGCGATTCATCAGTCGCCTTAAAAATCAGTTCGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTC                                                                     <  1:378101/143‑1
                                                                                     TCTATACACAAAAAAAAGGCGACTCACCAGCGGCCTGAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCA                                                                    <  1:72949/143‑1
                                                                                     TCTACACACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCA                                                                    <  2:245179/143‑1
                                                                                       TACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATTATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAAC                                                                  >  1:186966/1‑143
                                                                                        ACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACG                                                                 >  1:487535/1‑143
                                                                                         CAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGATTACAAGCGCCGCCTTCTGCGGTTCCCTGCCCTTAAATGACGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCCGCGGCAGAGTATTCAAAGT                                                                >  2:8178/1‑143
                                                                                            ACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGCTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCACGTCTTCGGTCATCACTACGTTCATGTCGGTCACTGCGGCAGAGTCCTCCACGTATg                                                             >  2:446695/1‑142
                                                                                             CAAAAAAAAGGCGCCTCATCAGTCGCCTTAAAAATCATGTTGCCGGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTC                                                            <  2:389396/143‑1
                                                                                                 AAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCCTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGACATCACTACGTTAATGTCGGTCTCTACGGCAGAGTCTTCAACGTATTCCAGA                                                        >  1:263649/1‑143
                                                                                                  agAAGGCGACTCATCAGTCGCCTTAAAACTCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTTCGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGAT                                                       <  2:40945/141‑1
                                                                                                  AAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCAGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGAT                                                       <  2:360130/143‑1
                                                                                                       GCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTATACAGAAATCACTACGTTCATGTCGGTCTATGCGGCAGAGTCTTCAACGTATTCCAGATCGCAA                                                  >  1:333474/1‑143
                                                                                                             CATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCCATGATGCGCCCGTCTTCGGTCATCACTACATTCATGTCAGTATATACAGAAAAGTCTTCAACATATTCCAGATCACAAACCGCT                                            >  1:454709/1‑143
                                                                                                                      GCCTTGAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGATCATGTCGATCTCTGCGACAGAGTCTCAAACGAATTCCAAATCGGAAACACGTTCGCCGTT                                    >  2:477811/1‑143
                                                                                                                      GCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTTCACTTTTATGATGCGTCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCGGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTT                                    <  1:195290/143‑1
                                                                                                                       CCTTAAAAATCAAGTCACCAGTGCCGTCTTCTGCCGTCCCCTGCACTTCACTGATGCGCCCGTCTTCGCTCATCACAACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTC                                   <  2:158415/143‑1
                                                                                                                        CTTAAACATCAGTTTGCCCGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCA                                  <  2:440865/143‑1
                                                                                                                              AATCAGTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACATTAATGTCGTTCTCTGCGGCAGAGTCTCCAACGTATTCCAGCACGCAAACAGCTTCGCCGTCCCCAATac                            >  2:339008/1‑141
                                                                                                                                   GTTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGACTTCAACGTATTCCAGATAGAAAACCACTTCGCCGTTCACAATTCCGACA                       >  1:262919/1‑143
                                                                                                                                    TTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCACTGCTGCGCCCGTCTTCGGTCATCACTAAAAACATGTAAATCTCTGCAGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAG                      >  1:36660/1‑143
                                                                                                                                    TTTGCCAGCGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGTGTCTTCAACGTATTCCAAATTACAAACCCCTTCGCCGTTCACAATTCTGACAG                      >  1:82213/1‑143
                                                                                                                                            CGCCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGCTCTCTGCGGCAGAGTCTTCAACGTATTCAAGATCGCAAACCGCTTCGCCGTTAACAATTCCGACAGAAACTGag              >  1:34818/1‑141
                                                                                                                                              CCGCCTTCTGCCGCCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGCTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGCAACTGCGtc            >  1:405858/1‑141
                                                                                                                                                GCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAAAGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCTGACAGAAACTGCGGCTA          >  1:38825/1‑143
                                                                                                                                                        CCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCTTTCACAATTCCGACAGAAACTGCGGCTACCATCCCT  <  1:367437/143‑1
                                                                                                                                                                                                                                                                                                       
CCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3815707‑3815858
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCT  >  NC_000913/3815941‑3816082

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.