New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2306358	21 (0.750)	3 (0.110)	3/258	NT	13.8%	coding (397/1647 nt)	mqo	malate:quinone oxidoreductase
	?	NC_000913	= 2306383	17 (0.620)					coding (372/1647 nt)	mqo	malate:quinone oxidoreductase

TAACGCATACCGCGAAACAGCGAGCTTTGTTGCAACGCGGCGTAACGGGCGCGCAGGAAATTGACGTTATCCTCGCCCCAGACAAAGCTCATATGCGGAACGGTATTGATAAATGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATGCTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCGGGGTGTAGTTCAGTTCCATCAGTGCAGAATGCCC  >  NC_000913/2306243‑2306511                                                                                                                                             |                                                                                                                                 tAACGCATACCGCGAAACAGCGAGCTTTGTTGCAACGCGGCGTAACGGGCGCGCAGGAAATTGACGTTATCCTCGCCCCAGACAAAGCTCATATGCGGAACGGTATTGATAAATGAACGCGGAGTACGCAGCACGCCGCGCtc                                                                                                                                <  2:284741‑M2/143‑3 (MQ=255)         aCCGCGAAACAGCGAGCTTTGTTGCAACTCGGCGTAACGGGCGCGCAGGAAATTGACGTTATCCTCGCCCCAGACAAAGCTCATATGCGGAACGGTATTGATAAATGAACGCGGAGTACGCAGCACCCCGCGCCCAAccaaga                                                                                                                        >  2:143343/1‑139 (MQ=255)                atcAGCGAGCTGTGTTTCAACGCGGGGTAACGGGCGAGCAGTAAATTGACGTTATCCGCGCCCCAGACAAAGCTCATATGCGGAACGGTATTGATAAATGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCa                                                                                                                 <  2:176698/141‑1 (MQ=255)                              ttgCAACGCGGCGTAACGGGCGCGCAGGAAATTGACGTTATCCTCGCCCCAGACAAAGCTCATATGCGGAACGGTATTGATAAATGAACGCGGAGAACGCAGCACGCCGCGCTCAACCTGGTGCGCGCAGAACTGGCTGGaac                                                                                                   >  2:254102/1‑142 (MQ=255)                                  aaCGCGGCGTAACGGGCGCGCAGGAAATTGACGTTATCCTCGCCCCAGACAAAGCCCATATGCGGAACGGTATCGATAAATGAACGCGGAGTACGCAGCACGCCGCGCTCACCCCGGTGCGCCCAGCACCGGCGGGaaagccg                                                                                               >  2:74589/1‑139 (MQ=255)                                            aaCGGGGGCGCAGGAAATTGACGTTATCCTCGCCCCAGACAAAGCTCATATGCGGAACGGTATTGATAAATGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATGCTTCg                                                                                     <  2:520474/143‑1 (MQ=255)                                                 gctagcAGTATATTGACGTTATCTTCGCTCTAGATTTAGCTAATATGCGGAACGGGATTGATAAATGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATGCTTCGTTAAt                                                                                <  1:479983/139‑1 (MQ=255)                                                            aTTGACGTTATCCTCGCCCCAGACAAAGCTCATATGCGGAACGGTATTGATAAATGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGACAAGAACTGGAAGGAAAAATGAAATGCTTCGTCAATGGCGACTGCtt                                                                     >  1:65548/1‑143 (MQ=255)                                                             ttGACGTTATCCTCGCCCCAGACAAAGCTCATATGCGGAACGGTATTGATAAATGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCGGAAATGCTTCGTTAATGGCGAGTGGttt                                                                    >  2:155760/1‑143 (MQ=255)                                                                aCGTTATCTTTGCCCCAGTCATAGCTCATATGCGGAACGGTATTGTTTTCTGAACGCGGTGTAAGCAGCACGCCGCGCTCAACCTGGGGCGCCCAGAACTGGCGGGAAATCTGAAATGCTTCGTTAATGGCGACTGCTTTTTc                                                                 <  1:447074/143‑1 (MQ=255)                                                                     aTCCTCGCCCCAGACAAAGCTCATATGCGGAACGGTATTGATAAATGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATGCTTCGTTAATGGCGACTGCTTTTTCAATAc                                                            >  1:440396/1‑143 (MQ=255)                                                                        cTCGCCCCAGACAAAGCTCATATGCGGAACGGAATTGATAAATGAACGCGGAGTACGCAGCCCGCCGCGCTCCACCTGGTGCGCCCCGAACTGGCGGGAAATCTGAAATACATCGTTAATAGAGACTGCTTTTACAATACTGa                                                         >  1:118728/1‑143 (MQ=255)                                                                            ccccAGACAAAGCTCATATGCGGAACGGTATTGATAAATGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATGCTTCGTTAATGGCGACTGCTTTTTCAATACTGAtgct                                                     >  1:563820/1‑143 (MQ=255)                                                                                       gCTCATATGCGGAACGGTATTGATAAATGAACGCGGAGTACGCAGCACGCCGCGCtcctttatcaataccgttccgcatatgcgctttgtctcgggcgaggataacgtaaattacaagcgagcaagttaaggcgcgttggaaa                                          <  1:193889‑M2/143‑89 (MQ=255)                                                                                                 ggAACGGTATTGATAAATGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGCAATCTGAAATGCTTCGTTAATGGCGTTTGTTCTTACAAAACTGATACTGCCATAGGAGTTTTGCTGGgt                                >  1:99422/1‑143 (MQ=255)                                                                                                   aaCGGTATTGATAAATGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGACATCTGCAATGCTTCGTTAATGGCGACTGCTTTTTCAAAACAGATGCTGCCATCGGCGTTTTGCGGGgtgt                              >  1:265745/1‑143 (MQ=255)                                                                                                        tATTGATAAATGAACGCGGAGTACGCAGCACGCCGCGCtcatttatcaataccgttccgcatatgagctttgtctggggcgaggataacgtcaatttcctgcgcgcccgttacgccgcgttgcaacaaagcccgctgtttcgc                         <  1:341513‑M2/143‑106 (MQ=255)                                                                                                         agtGACAAATGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAAGGCTGCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCGGGGTGTagttca                        <  1:81299/141‑1 (MQ=255)                                                                                                             ctAAATGCACGCGGTGTACGCAGCACGTCGCGCTCAACCTGGTGCGCCCAGAACTGCCGGGAAATCTGAAATGCTTCGTTAATGGCGATTGCTTTTTCAATACTGATGCTGCCATCGTCGTTTTGCGGGGTGTagttcagttc                    <  2:257887/142‑1 (MQ=255)                                                                                                                     aCGCGGAGTACGCAGCACGCCGCGTtcatttatcaataccgttccgcatatgagctttgtctggggcgaggataacgtcaatttcctgcgcgccccttacgccgcgttgcaacacggctcgctgcttcgcggtctgcgttacc            <  1:127869‑M2/143‑119 (MQ=255)                                                                                                                              accgagccCGCCGCGCCCACCGTGGGCAGCCCAGACCTGGCGGGCCACGTGAACTGCTTCGTTAATGGCGCCTGCTTTTTCCATCCTGATGCTGCCTTCGGCGTTTTGCGGGGTGTAGTTCAGTTCCATCAGTGCAGAATGcc   <  1:203148/139‑1 (MQ=255)                                                                                                                               cGCAGCACGCCGCGCTCAACCTGGTGCGCCGAGATCTGGCGGGAAATCTGACATGCTTCGTTAATGGCGACTGCTTTTTCTGCACTGATGCTGCCATCGGCGTTTTGCGGGGTGTAGTTCAGTTCGATCAGTGCAGAATGtcc  <  2:290819/143‑1 (MQ=255)                                                                                                                                             |                                                                                                                                 TAACGCATACCGCGAAACAGCGAGCTTTGTTGCAACGCGGCGTAACGGGCGCGCAGGAAATTGACGTTATCCTCGCCCCAGACAAAGCTCATATGCGGAACGGTATTGATAAATGAACGCGGAGTACGCAGCACGCCGCGCTCAACCTGGTGCGCCCAGAACTGGCGGGAAATCTGAAATGCTTCGTTAATGGCGACTGCTTTTTCAATACTGATGCTGCCATCGGCGTTTTGCGGGGTGTAGTTCAGTTCCATCAGTGCAGAATGCCC  >  NC_000913/2306243‑2306511

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.