| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4389302 = | 57 (1.770) | 3 (0.100) | 3/254 | NT | 5.8% | coding (69/3324 nt) | mscM | miniconductance mechanosensitive channel MscM |
| ? | NC_000913 | 4389328 = | 43 (1.390) | coding (43/3324 nt) | mscM | miniconductance mechanosensitive channel MscM | |||||
GAAGCAGAACACGACGCCAGCCCATTGGTTGACGACAAAAAAGACCAGGTCTAATCCATCAAAGGAAACGCTGACGTGCGCCTGATTATCACTTTTCTGATGGCCTGGTGCCTCAGTTGGGGGGCGTACGCCGCGACGGCCCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4389445‑4389302‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccccAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAGGCGCACGTCAGCGTTTCCTTTGATGGATTAGACCTGGTCTTTTTTGTCGTCAACCAATGGGCTGGCGTCGTGTTCTGCTTCGATCTCTTCAGCAGGAAGCGG > NC_000913/4389328‑4389466 GAAGCAGAACACGACGCCAGCCCATTGGTTGACGACAAAAAAGACCAGGTCTAATCCATCAAAGGAAACGCTGACGTGCGCCTGATTATCACTTTTCTGATGGCCTGGTGCCTCAGTTAGGTGACATACACCGCGACGGCCCC > 1:227562/1‑143GAAGCAGAACACGACGCCAGCCCATTGGTTGACGACAAAAAAGACCAGGTCTAATCCATCAAAGGAAACGCTGACGTGAGCCTGATTATGACTTTTCTGATGGCCTGGTGCCTCAGTTGGGGGGCGGAAGCCGCGACGGCCac > 2:185868/1‑141 AAGCAGAACACGACGCCAGCCCATTGGTTGACGACAAAAAAGACCAGGTCTACTCCATCAAAGGAAACGCTGACGTGCGCCTGATTATCACTTTTCTGATGGCCTGGTGCCTCAGTTGGGGGGCGTACGCCGCGACGGACCCC > 2:23686/1‑143 ATCACTTTTCTGATGGCCTGGTGCCTCAGTTGGGGGGCGTACGCCGCGACGGCCCCCAACTGAGGCACCAGGCCATCCGTAAAGTGATAATCAGGCGCACGTCAGTGTCTACAAAAATGGATTAAAACAGGTCATTTTTGTCG > 1:483413/1‑143 TGATGGCCTGGTGCCTCAGTTGGGGGGCGTACGCCGCGACGGCCCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAGGCGCACGTCAGCGTTTCCTTCGATGGATTAGACAGGGTCTTTTTTGTCGTTTACCAATG > 2:86318/1‑143 TTGGGGGGCGTACGCCGCGACGGCCCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAGGCGCACGTCAGCGTTTCCTTTGATGGATTAGACCTGGTCTTTTTTGTCGTCACCCAATGGGCTGGCGTCGTGTTGTGg > 2:3904/1‑142 CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAGGCGCACGTCAGCGTTTCCTTTGATGGATTAGTCCTGGTCTTTTTTGTCGTCAACCAATGGGCTGGCGTCGTGTTCTGCTTCGATCTCTTCAGCAGGAAGCGG < 1:551140/143‑1 CCCCAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAGGCGCACGTCAGCGTTTCCTTTGATGGATTAGACCTGGTCTTTTTTGTCGTCAACCAATGGGCTGGCGTCGTGTTCTGCTTCGATCTCTTCAGCAGGAAGCGG < 2:362245/143‑1 GAAGCAGAACACGACGCCAGCCCATTGGTTGACGACAAAAAAGACCAGGTCTAATCCATCAAAGGAAACGCTGACGTGCGCCTGATTATCACTTTTCTGATGGCCTGGTGCCTCAGTTGGGGGGCGTACGCCGCGACGGCCCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4389445‑4389302‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccccAACTGAGGCACCAGGCCATCAGAAAAGTGATAATCAGGCGCACGTCAGCGTTTCCTTTGATGGATTAGACCTGGTCTTTTTTGTCGTCAACCAATGGGCTGGCGTCGTGTTCTGCTTCGATCTCTTCAGCAGGAAGCGG > NC_000913/4389328‑4389466 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |