| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4143957 | 50 (0.990) | 3 (0.060) | 3/254 | NT | 5.7% | intergenic (+13/‑38) | frwB/pflD | putative PTS enzyme IIB component FrwB/putative formate acetyltransferase 2 |
| ? | NC_000913 | = 4143965 | 52 (1.070) | intergenic (+21/‑30) | frwB/pflD | putative PTS enzyme IIB component FrwB/putative formate acetyltransferase 2 | |||||
CGGCATCAAGTTTGAAGAGCGTTTTGCTGGCAAGACCATCGTGCGCGTCAACATCAGCGATGCAGTAAAACGTGCTGACGCCATTATGAGCAAAATTGAAGCTCACCTGGCGCAAACCGCTTAAGTTCTTCTCCCGCTCGCAAGGGCGGGTTCGCTTTCCCACAGGAGTTCCTCATGACGAATCGTATCTCTCGCCTCAAAACTGCACTGTTTGCCAATACCCGTGAAATCTCGCTGGAGCGGGCGCTGCTTTATACCGCCAGCCATCGGCAAACCGAA > NC_000913/4143821‑4144099 | cGGCATCAAGTTTGAAGAGCGTTTTGCTGGCAAGACCATCGTGCGCGTCAACATCAGCGATGCAGTAAAACGTGCTGACGCCATTATGAGCAAAATTGAAGCTCACCTGGCGCAAACCGCTTAAGTTCTTCTCCCGCTCGCaa < 1:987621/143‑1 (MQ=255) cATCAAGTTTGAAGAGCGTTTTGCTGGCAAGACCATCGTGCGCGTCAACATCAGCGATGCAGTAAAACGTGCTGACGCCATTATGAGCAAAATTGAAGCTCACCTGGCGCAAGCCGCTTAAGTTCTTCTCCCGCTCGCAAGGg < 1:839976‑M2/143‑2 (MQ=255) aGTTGGAAGGGCGTTTTGCTGGCAAGACCATCGTGCGCGTCAACATCAGCGATGCAGTAAACCGTGCTGACGCCATTATGAGCAAAATTGAAGCTCACCTGGCGCAAACCGCTTAAGTTCTTCTCCCGCccttgcgagcggga < 1:306923‑M1/143‑15 (MQ=255) ttttGCTGGCAAGACCATCGTGCGCGTCAACATCAGCGATGCAGTAAAACGTGCTGACGCCATTATGAGCAAAATTGAAGCTCACCTGGCGCAAACCGCTTAAGTTCTTCTCCCGCTCGCCAGGGCGGGTTCGCTTTCCcaca > 1:480481/1‑143 (MQ=255) ttttCTGGCAAGACCATCGTGCGCGTCAACATCAGCGATGCAGTAAAACGTGCTGACGCCATTATGAGCAAAATTGAAGCTCACCTGGCGCAAACCGCTTAAGTTCTTCTCCCGCTCGCAAGGGCGGGTTCGCTTTCCCACAg < 2:263638/143‑1 (MQ=255) gttGGTGGCAACACCGTCGTGCGCGTCAACATCAGCGATGCAGTAAAACGTGCTGACGCCATTATGAGCAAAACTGAAGCTCACCTGGCGCAAACCGCTTGAGTTCTTCTCCCGCTCGCAAGGGCGGGTTCGCTTTCCCACAg < 2:15046/142‑1 (MQ=255) ggCAAGACCAACGTGCGCGTCAACATCAGCGATGCAGTAAAACGTGCTGACGCCATTATGAGCAAAATTGAAGCTCACCTGGCGCAAACCGCTTAAGTTCTTCTCCCGCTCGCAAGGGCGGGTTCGCTTTCCCACAGGAGTTc < 1:628466/143‑1 (MQ=255) gCAAGACCATCGTGCGCGTCAACATCAGCGATGCAGTAAAACGTGCTGACGCCATTATGAGCAAAATTGAAGCTCACCTGGCGCAAACCGCTTAAGTTCTTCTCCCGCTCGCAAGGGCGGGTTCGCTTTCCCACAGGAGTTcc < 2:132128/143‑1 (MQ=255) gCAACACGATCGTCGGCGTCATCATCAGCGATGCAGTAAAACGTGCTGACGCCATTATGAGCAAAATTGAAGCTCACCTGGCGCAAACCGCTTAAGTTCTTCTCCCGCTCGCAAGGGCGGGTTCGCTTTCCCACAGGAGTTcc < 2:858306/143‑1 (MQ=255) aaGACCATCGTGCGCGTCAACATCAGCGATGCAGGAAAACGTGCTGACGCCATTATGAGCAAAATTGAAGCTCACCTGGCGCAAACCGCTTAAGTTCTTCTCCCGCTCGCAAGGGCGGGTTCGCTTTCCCACAGGAGTTCCTc < 2:739309/143‑1 (MQ=255) aCCATCGTGCGCGTCAACATCAGCGATGCAGTAAAACGTGCTGACGCCATTATGAGCAAAATTGAAGCTCACCTGGCGCAAACCGCTTAAGTTCTTCTCCCGCccttgcgagcgggagaagaacttaagcggttt < 1:787010‑M1/135‑33 (MQ=255) aCCATCGTGCGCGTCAACATCAGCGATGCAGTAAAACGTGCTGACGCCATTATGAGCAAAATTGAAGCTCACCTGGCGCAAACCGCTTAAGTTCTTCTCCCGCccttgcgagcgggagaagaacttaagcggttt > 2:787010‑M1/1‑103 (MQ=255) ccATCGTGCGCGTCAACATCAGCGATGCAGTAAAACGTGCTGACGCCATTATGAGCAAAATTGAAGCTCACCTGGCGCAAACCGCTTAAGTTCTTCTCCCGCTCGCAAGGGCGGGTTCGCTTTCCCACAGGAGTTCCTCATGa < 1:761980/143‑1 (MQ=255) ccAGCGTGCGCGTCAACATCAGCGATGCAGTAAAACGTGCTGACGCCATTATGAGCAAAATTGAAGCTCACCTGGCGCAAACCGCTTAAGTTCTTCTCCCGCTCGCAAGGGCGGGTTCGCTTTCCCACAGGAGTTCCTCATGa < 2:354000/143‑1 (MQ=255) gcgTCAACATCAGCGATGCAGTAAAACGTGCTGACGCCATTATGAGCAAAATTGAAGCTCACCTGGCGCAAACAGCTTAAGTTCTTCTCCCGCTCGCAAGGGCATGTTCGCTTTGCCACACGAATTTCTCATCACTAAtacta > 2:790056/1‑139 (MQ=255) tCAACATCAGCGATGCAGTAAAACGTGCTGACGCCATTATGAGCAAAATTGAAGCTCACCTGGCGCAAACCGCTTAAGTTCTTCTCCCGCTCGCAAGGGCGGGTTCGCTTTCCCACAGGAGTTCCTCATGACGAATCGTAtct < 2:662211/143‑1 (MQ=255) cgtCAGCGATGCAGTAAAACGTGCTGACGCCATTATGAGCAAAATTGAAGCTCACCTGGCGCAAACCGCTTAAGTTCTTCTCCCGCTCGCAAGGGCGGGTTCGCTTTCCCACAGGAGTTCCTCATGACGAATCGTATCTCTCg < 2:458673/141‑1 (MQ=255) ccgcAGCGATGCAGTAAAACGTGCTGACGCCATTATGAGCAAAATTGAAGCTCACCTGGCGCCAACCGCTTAAGTTCTTCTCCCGCTCGCAAGGGCGGGTTCGCTTTCCCACAGGAGTTCCTCATGACGAATCGTATCTCTCg < 1:75459/140‑1 (MQ=255) agcAGCGATGCAGTAAAACGTCCTGACGCCATTATGAGCAAAATTGAAGCTCACCTGGCGCAAACCGCTTAAGTTCTTCTCCCGCTCGCAAGGGCGGGTTCGCTTTCCCACAGGAGTTCCTCATGACGAATCGTATCTCTCGc < 1:62793/141‑1 (MQ=255) aTCAGCGATGCAGTAAAACGTGCTGACGCCATTATGAGCAAAATTGCAGCTCACCTGGCGCAAACCGCTTAAGTTCTTCTCCCGCTCGCAAGGGCGGGTTCGCTTTCCCACAGGAGTTCCTCATGACGAATCGTATCTCTCGc < 2:399601/143‑1 (MQ=255) tCAGCGATGCAGTAAAACGTGCTGACGCCATTATGAGCAAAATTGAAGCTCACCTGGCGCAAACCGCTTCAGTTCTTCTCCCGCTCGCAAGGGCGGGTTCGCTTTCCCACAGGAGTTCCCCACGACGAACCGCCTCTCTCGcc > 2:68419/1‑143 (MQ=255) aGCGATGCAGTAAAACGTGCTGACGCCATTATGAGCAAAATTGAAGCTCACCTGGCGCAAACCGCTTAAGTTCTTCTCCCGCTCGCAAGGGCGGGTTCGCTTTCCCACAGGCGCTCCTCCTGCAGCATCGTATCTCTCGCCTc > 2:81004/1‑143 (MQ=255) gATGCAGTAAAACGTGCTGACGCCATTATGAGCAAAATTGAAGCTCACCTGGCGCAAACCGCTTAAGTTCTTCTCCCGCTCGCAAGGGCGGGTTCGCTTTCCCACAGGAGTTCCTCATGACGAATCGTATCTCTCGCCTCaaa > 2:420664/1‑143 (MQ=255) tGCAGTAAAACGTGCTGACGCCATTATGAGCAAAATTGAAGCTCACCTGGCGCAAACCGCTTAAGTTCTTCTCCCGCTCGCAAGGGCGGGTTCGCTTTCCCACAGGAGTTCCTCATGACGAATCGTATCTCTCGCCTCAAAAc < 2:561351/143‑1 (MQ=255) gcagcaAAACGTGCTGTCTCCATTATGAGCAGAATTGAAGCTCACCTGGCGCGACCCGCTTAAGTTCTTCTCCCGCTCGCCAGGGCGGGTTCGCTTTCCCACAGGAGTTCCTCATGACGAATCGTATCTCTCGCCTCAAAACt < 2:528015/143‑1 (MQ=255) gCAGTAAAACGTGCTGACGCCATTATGAGCAAAATTGAAGCTCACCTGGCGCAAACCGCTTAAGTTCTTCTCCCGCTCGCACGGGCGGGTTCGCTTTCCCACAGGAGTTCCTCATGACGAATCGTATCTCTCGCCTCAAAACt > 1:393110/1‑143 (MQ=255) gTAAAACGTGCTGACGCCATTATGAGCAAAATTGAAGCTCACCTGGCGCAAACCGCTTAAGTTCTTCTCCCGCTCGCAAGGGCGGGTTCGCTTTCCCACAGGAGTTCCTCATGACGAATCGTATCTCTCGCCTCAAAACTGCa < 1:674889/143‑1 (MQ=255) gTAAAACGGGCCGACGCCATTGTGAGCCAAAGTGAAGCTCACCTGGCGCAACCCGCTCAAGTTCTTCTCCCGCTCGCAAGGGCGTGTTCGCTTTCCCACAGGAGTTCCTCATGACGAATCGTATCTCTCGCCTCAAAACTGCa < 2:373982/143‑1 (MQ=255) aCGTGCTGACGCCATTATGAGCAAAATTGAAGCTCACCTGGCGCAAACCGCTTAAGTTCTTCTCCCGCTCGCAAGGGCGGTTTCGCTTTCCCACAGGAGTTCCTCATGACGAATCGTATCTCTCGCCTCAAAACTGCACTGtt < 1:83320/143‑1 (MQ=255) tGCTGACGCCATTATGAGCAAAATTGAAGCGCACCTGGCGCAAACCGCTTAAGTTCTTCTCCCGCTCGCAAGGGCGGGTTCGCTTTCCCACAGGAGTTCCTCATGACGAATCGTATCTCTCGCCTCAAAACTGCACTGTTTGc < 2:709597/143‑1 (MQ=255) gtGACGCGTTGATGATCAAAATTGACGCTCCCCTGGCGCACCCCGCTTAAGTCCTTCTCCCGCTCGCAAGGGCGGGTTCGCTTTCCCACAGGAGTTCCTCATGACGAAGCGTATCTCTCGCCTCAAAACTGCACTGTTTGCCa < 1:362528/142‑1 (MQ=255) gcGCCATTATGAGCAAAATTGAAGCTCACCTGGCGCTAACCGCTTAAGTTCTTCTTCGGCTCGGAAGGGCGGGTTCGCTTTCCGACAGGAGTTCCGCATGACGAATCGTATCTCTCGCCTCAAAACTGCACTGTTTGCCAATa < 1:201535/142‑1 (MQ=255) gCCATTATGAGCAAAATTGAAGCTCACCTGGCGCAAACCGCTTCAGTTCTTCTCCCGCTCGCAAGGGCGGGTTCGCTTTCCCACAGGAGTTCCTCATGACGAATCGTATCTCTCGCCTGAAAACTGCACTGTTTGCCGAtcac > 1:68406/1‑140 (MQ=255) ccATGATGAGCAAACTTGCAGCTCACCTGGCGCTAACAGCTTAAGTTCGTCTCCCGCTCGCAAGGGCGTGTTCGCTTTCCCACAGCAGTTCCCCATGACGAATCGTATCTCTCGCCTCAAAACTGCACTGTTTGCCAATcccc < 2:71149/143‑1 (MQ=255) gCAAAATTGAAGCTCACCTGGCGCAAACCGCTTAAGTTCTTCTCCCGCTCGCAAGGGCGGGTTCGCTTTCCCCCAGGAGTTCCTCATGACGAATCGTATCTCTCGCCTCGACACTGCACTGGTTGCCAATACCCGTGaaacca > 2:184672/1‑140 (MQ=255) aaaaTTGAAGCTCACCTGGCGCAAACCGCTTAAGTTCTTCTCCCGCTCGCAAGGGCGGGTTCGCTTTCCCACAGGAGCTCCTCATGCCGAATCGTATCTCTCGCCTCAAAACCGCACTGTTGGCCAATACACGTGAACTCTCg > 1:662604/1‑143 (MQ=255) acttGGAGCTCACCTGGCGCAAACCGCTTAAGTTCTTCTCCCGCTCGCAAGGGCGGGTTCGCTTTCCCACAGGAGTTCCTCATGACGAATCGTATCTCTCGCCTCAAAACTGCACTGTTTGCCAATACCCGTGAAATCTCGCt < 2:420476/141‑1 (MQ=255) tGAAGCTCACCTGGCGCAAACCGCTTAAGTTCTTCTCCCGCTCGCAAGGGCGGGTTCGCTTTCCCCCAGGCGTTCCTCATGCCGAATCGTATCTCTCGCCTCAAAACTGCACTGTTTGCCAATACCCGCGACATCTCGCCGGa > 2:216112/1‑143 (MQ=255) tGAAGCTCACCTGGCGCAAACCGCTTAAGTTCTTCTCCCGCTCGCAAGGGCGGGTTCGCTTTCCCACAGGAGTGCCTGATGACGAATCGTATCTCTCGCCTCAAAACTGCACTGTTTGCCAATACCCGTGAAATCTCGCTGGa > 1:213259/1‑143 (MQ=255) gAAGCTCACCTGGCGCAAACCGCTTAAGTTCTTCTCCCGCTCGCAAGGGCGGGTGCGCTTTCCCACAGGAGTTCCTCATGACGAATCGTATCTCTCGCCTCAAAACTGCACTGTTTGCCAATACCCGTGAAATCTCGCTGGAg < 1:651023/143‑1 (MQ=255) aaGCTCACCTGGCGCAAACCGCTTAAGTTCTTCTCCCGCTCGCAAGGGCGGGTTCGCTTTCCCACAGGAGTTCCTCATGACGAATCGTATCTCTCGCCTCAAAACTGCACTGTTTGCCAATACCCGTGAAATCTCGCTgtcgc > 2:17420/1‑139 (MQ=255) aaGCTCACCTGGCGCAAACCGCTTAAGTTCTTCTCCCGCTCGCAAGGGCGGGTTCGCTTTCCCACAGGAGTTCCTCATGACGAATCGTATCTCTCGCCTCAAAACTGCACTGTTTGCCAATACCCGTGAAATCTCGCTGGAGc > 1:183142/1‑143 (MQ=255) cTCACCTGGCGCAAGTCGCTTTACTTCTGCTCCCGCTCGCAAGGGCGGGTTCGCTTTCCCACAGGAGTTCCTCATGACGAATCGTATCTCTCGCCTCAAAACTGCACTGTTTGCCAATACCCGTGAAATCTCGCTGGAGCggg < 2:312891/143‑1 (MQ=255) cTGGCGCCAACCGCGTAAGTTCTTCTCCCGCTCGCAAGGTCGGGTTCGCTTTCCCACAGGAGTTCCTCATGACGAATCGTATCTCTCGCCTCAAAACTGCACTGTTTGCCAATACCCGTGAAATCTCGCTGGAGCGGGCgctg < 1:410639/143‑1 (MQ=255) tGGCGCAAACCGCTTAAGTTCTTCTCCCGCTCGCAAGGGCGGGTTCGCTTTCCCACAGGAGTTCCTCATGACGAATCGTATCTCTCGCCTCAAAACTGCGCTGTTTGCCAATACCCGGGAAATCTCGCTGGAGCGGGCgctgc > 1:502498/1‑143 (MQ=255) ggCGCATACCGCTTAAGGTCTTCTCCCGCTCGCAAGGGCGGGTTCGCTTTCCCACAGGAGTTCCTCATGACGAATCGTATCTCTCGCCTCAAAACTGCACTGTTTGCCAATACCCGTGAAATCTCGCTGGAGCGGGCgctgct < 2:561808/143‑1 (MQ=255) ggCGCAAACCGCTTAAGTTCTTCTCCCGCTCGCAAGGGCGGGTTCGCTTTCCCACAGGAGTTCCTCATGACGAATCGTATCTCTCGCCTCAAAACTGCACTGTTTGCCAATACCCGTGAAATCTCGCTGGAGCGGGCgctgct < 1:420664/143‑1 (MQ=255) cgcAAACCGCTTAAGTTCTTCTCCCGCTCGCAAGGGCGGGTTCGCTTTCCCACAGGAGTTCCTCATGACGAATCGTATCTCTCGCCTCAAAACTGCACTGTTTGCCAATACCCGTGAAATCTCGCTGGAGCGGGCGCTGCttt > 1:375034/1‑143 (MQ=255) cAAACCGCTTAAGTTCTTCTCCCGCTCGCAAGGGCGGGTTCGCTTTCCCACAGGAGTTCCTCATGACGAATCGTATCTCTCGCCTCAAAACTGCCCTGTTTGCCAATACCCGTGAAATCTCGCTGGAGCGGGCGCTGCTTtat > 1:845142/1‑143 (MQ=255) aaaCCGCTTAAGTTCTTCTCCCGCTCGCAAGGgcgggagaagaacttaagcggtttgcgccaggtgagcttcaattttgctcataatggcgtcagcacgttttactgcatcgctgatgttgacgcgcacgatggt < 1:787010‑M2/135‑104 (MQ=255) aaaCCGCTTAAGTTCTTCTCCCGCTCGCAAGGgcgggagaagaacttaagcggtttgcgccaggtgagcttcaattttgctcataatggcgtcagcacgttttactgcatcgctgatgttgacgcgcacgatggt > 2:787010‑M2/1‑32 (MQ=255) aaaCCGCTTAAGTCCTCCTCCCGCTCGCAAGGGCGGGTTCGCTTTCCCACAGGCGTGCCTCATGACGAATCGTATCCCTCGCCTCAAACCTGCACTGTTTGCCAATACCCGTGAAATCTCGCTGGAGCGGGCGCTGCTTtata < 1:959260/143‑1 (MQ=255) aCCGCTTAAGTTCTTCTCCCGCTCGCAAGGGCGGGTTCGCTTTCCCACAGGAGTTCCTCATGACGAATCGTATCTCTCGCCTCAAACCTGCACTGTTTGCCAATACCCGTGAAATCCCGCTGGAGCGGGCGCTGCTTTGTAcc > 1:211364/1‑143 (MQ=255) aCCGCTTAAGTTCTTCTCCCGCTCGCAAGGGCGGGTTCGCTTTCCCACAGGAGTTCCTCATGACGAATCGTATCTCTCGCCTCAAAACTGCACTGTTTGCCAATACCCGTGAAATCTCGCTGGAGCGGGCGCTGCTTTATAcc < 1:634599/143‑1 (MQ=255) ggtcttctCCCGCTCGCAAGGGCGGGTTCGCTTTCCCACAGGAGTTCCTCATGACGAATCGTATCTCTCGCCTCAAAACTGCACTGTTTGCCACTACCCGTGAAACCCCCCTGGAACAGGCGATGCTTCAAACACCCAGCCAt > 2:393125/3‑143 (MQ=255) ctgctcCCGCTCGCAAGGGCGGGTTCGCTTTCCCACAGGAGTTCCTCATGACGAATCGTATCTCTCGCCTCAAAACTGCACTGTTTGCCAATACCCGTGAAATCTCGCTGGAGCGGGCGCTGCTTTATACCGCCAGCCATCgg < 1:323676/140‑1 (MQ=255) ctgccccccCTCCCAAGGGCGGGTGCGCTTTCCCACAGGAGTTCCTCATGACGAATCGTATCTCTCGCCTCAAACCTGCACTGTTTGCCAATACCCGTGAAATCTCGCTGGAGCTGGCGCTGCTTTATACCGCCAGCCATCgg < 1:100904/138‑1 (MQ=255) tcCCGCTCGCAAGGgcgggagaagaacttaagcggtttgcgccaggtgagcttcaattttgctcataatggcgtcagcacggtttactgcatcgctgatgttgacgcgcacgatggtcttgccagcaaaacgcccttccaact < 1:306923‑M2/143‑130 (MQ=255) ccGCTCGCAAGGGCGGGTTCGCTTTCCCACAGGAGTTCCTCATGACGAATCGTATCTCTCGCCTCAAAACTGCACTGTTTGCCAATACCCGTGAAATCTCGCTGGAGCGGGCGCTGCTTTATACCGCCAGCCATCGGCAAAcc > 2:817315/1‑143 (MQ=255) ccGCTCGCAAGGGCGGGATCGCTTTCCCACAGGAGTTCCTCATGACGAATCGTATCTCTCGCCTCAAAACTGCACTGTTTGCCAATACCCGTGAAATCTCGCCGCAGCGGGCGCGGCTTTATACCGCGAGACATCGGCCAAcc > 1:839710/1‑143 (MQ=255) cccttgcgagcgggagaagaacttaagcggcttgcgccaggtgagcttcaattttgctcataatggcgtcagcacgttttactgcatcgctgatgttgacgcgcacgatggtcttgccagcaaaacgctcttcaaacttgatg < 1:839976‑M1/143‑143 (MQ=255) | CGGCATCAAGTTTGAAGAGCGTTTTGCTGGCAAGACCATCGTGCGCGTCAACATCAGCGATGCAGTAAAACGTGCTGACGCCATTATGAGCAAAATTGAAGCTCACCTGGCGCAAACCGCTTAAGTTCTTCTCCCGCTCGCAAGGGCGGGTTCGCTTTCCCACAGGAGTTCCTCATGACGAATCGTATCTCTCGCCTCAAAACTGCACTGTTTGCCAATACCCGTGAAATCTCGCTGGAGCGGGCGCTGCTTTATACCGCCAGCCATCGGCAAACCGAA > NC_000913/4143821‑4144099 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |