New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4240158 =NA (NA)3 (0.060) 3/250 NT NA noncoding (1/37 nt) other REP314
?NC_000913 4240189 = NA (NA)noncoding (32/37 nt) other REP314

Only 100 of 136 total aligned reads displayed.

AAGGCTTCATTTTTACCACCTTTATCAGGTTACGTTTCATTTGTTCCAGAGGAACATTGTCGATTTTTCGCGCATTGC‑TGGTG‑GCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTATACAGGAAGCT  >  NC_000913/4240016‑4240300
                                                                                                                                                |                                                                                                                                              
aaGGCTTCATTTTTACCACCTTTATCAGGTTACGTTTCATTTGTTCCAGAGGAACATTGTCGATTTTTCGCGCATTGC‑TGGTG‑GCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGc                                                                                                                                                <  1:442678/143‑1 (MQ=255)
   gtcatagcagtacctccttcacagtggcgagcttcctgtataacgcaaaaatgtgacggagatctatattttttgtgtatgttttgttcaacctggatttggagcgcgcctccaccaaagccggatatacctacccgtaggcc                                                                                                                                               <  2:612590‑M1/2‑1 (MQ=255)
    cTTCATTTTTACCCCCGTTGTCGGGGTACGTTTCATTGGTTCCAGAGGAACATGGTCGATTTTTCGCGCATTGC‑TGGTG‑GCTGGGAATCACCTGAGTGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGa                                                                                                                                            <  2:450194/143‑1 (MQ=255)
      tCATTTTTACCACCTTTATCAGGTTACGTTTCATTTGTTCTAGAGGAACATTGTCGATTTTTCGCGCATTGC‑TGGTG‑GCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGCTTGTCTTGCCGGTTg                                                                                                                                          >  2:300123/1‑143 (MQ=255)
      tCATTTTTACCACCTTTATCAGGTTACGTTTCATTTGTTCCAGAGGAACATTGTCGATTTTTCGCGCATTGC‑TGCTG‑GCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCCGATg                                                                                                                                          >  2:625411/1‑143 (MQ=255)
      atagcagtacctccttcacagtggcgagcttcctgtataacgcaaaaatgtgacggagatctatattttttgtgtatgttttgttcaacctggatttggagcgcgcctccaccaaagccggatatacctacccgtaggCCGGa                                                                                                                                            >  2:677869‑M1/139‑143 (MQ=255)
        agcagtacctccttcacagtggcgagcttcctgtataacgcaaaaatgtgacggagatctatattttttgtgtatgttttgttcaacctggatttggagcgcgcctccaccaaagccggatatacctacccgtcggCCGGatc                                                                                                                                          <  1:417116‑M1/7‑2 (MQ=255)
              accaccTTTATCAGGTTACGTTTCATTTGTTCCAGAGGAACATTGTCGATTTTTCGCGCATTGC‑TGGTG‑GCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCa                                                                                                                                  <  2:673861/143‑1 (MQ=255)
               ccaccTTTATCAGGTTACGTTTCCTTTGTTCCAGAGGAACATTGTCGATTTTTCGCGCATTGC‑TGGTG‑GCTGCGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTAGTGCGGTTTGTCTTGCCGGCTGCgccgccgg                                                                                                                                 >  2:25236/1‑141 (MQ=255)
               ccaccTTTATCAGGTTACGTTTCATTTGTTCCAGAGGAACATTGTCGATTTTTCGAGAACTACGCGGTG‑G‑TGGGGATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAg                                                                                                                                 >  1:622162/1‑143 (MQ=255)
                caccTTTATCAGGTTACGTTTCATTTGTTCCAGAGGAACATTGTCGATTTTTCGCGCATTGC‑TGGTG‑GCTGGGCATCACCTGAATGGGTGAGTATTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCGAgg                                                                                                                                >  1:330583/1‑143 (MQ=255)
                caccTTTATCAGGTTACGTTTCATTTGTTCCAGAGGAACATTGTCGATTTTTCGCGCATTGC‑TGGTG‑GCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAgg                                                                                                                                >  2:461929/1‑143 (MQ=255)
                caccTTTATCAGGTTACGTTTCATTTGTTCCAGAGGAACATTGTCGATTTTTCGCGCATTGC‑TGGTG‑GCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAgg                                                                                                                                >  1:793528/1‑143 (MQ=255)
                 accTTTATCAGGTTACGTTTCATTTGTTCCAGAGGAACATTGTCGATTTTTCGCGCATTGC‑TGGTG‑GCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGgc                                                                                                                               >  2:599615/1‑143 (MQ=255)
                  ccTTTATCAGGTTACGTTTCATTTGTTCCAGAGGAACATTGTCGATTTTTCGCGCATTGC‑TGGTG‑GCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCGGgcg                                                                                                                              >  1:545801/1‑143 (MQ=255)
                    tttATCCGGTTACGTTTCATTTGTTCCAGAGGAACATTGTCGATTTTTCGCGCATTGC‑TGGTG‑GCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGcgcg                                                                                                                            <  1:444184/143‑1 (MQ=255)
                    tttATCAGGTTACGTTTCATTTGTTCCAGAGGAACATTGTCGATTTTTCGCGCATTGC‑TGGTG‑GCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGcgcg                                                                                                                            <  1:347254/143‑1 (MQ=255)
                     ttATCGTGTTACGTCTCATTTGTTCCGGAGGACCATTGTCGATTTTTCGC‑CATTTG‑TTTTGTGTTGGGCAGCACCTGTATGGGTGATTTTTGAATTCCCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCgg                                                                                                                           <  2:854670/143‑1 (MQ=255)
                     gtATCAGGTTACGTTTCATTTGTTCCAGAGGAACATTGTCGATTTTTCGCGCATTGC‑TGGTG‑GCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCgg                                                                                                                           <  2:490001/142‑1 (MQ=255)
                        tCAGGTTACGTTTCATTTGTTCCAGAGGAACATAGTCGATTTTTCGCGCATTGC‑TGGAG‑GCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCGTTGGTGCGGTTTGTCTTGCCGGAAGCGCAGCCAGCCGCGGcgt                                                                                                                        >  2:339427/1‑141 (MQ=255)
                           ggTTACGTTTCATTTGTTCCAGAGGAACATTGTCGATTTTTCGCGCATTGC‑GGGTG‑GCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATc                                                                                                                     <  1:757139/143‑1 (MQ=255)
                            gTTACGTTTCTTTTGTTCCAGAGTAACATTGTCGATTTTTCTCGCTTTGC‑TGGTG‑GCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATcc                                                                                                                    <  1:177740/143‑1 (MQ=255)
                             tttctgttCATTTGTTCCAGAGGATCATTGTCTATGTTTCGCGCTTTTC‑GGGTG‑GCTGGGAATGACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATTCGCCGCCAGGCGCGGCTTATCCg                                                                                                                   <  2:772099/137‑1 (MQ=255)
                              tACGTTTAATTTGTAGCAGAGGAACAGTGTCGATTTTTCGCGCATTGC‑TGGTG‑GCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCgg                                                                                                                  <  1:486672/143‑1 (MQ=255)
                                cGTTTCTTTTGTTGCAGAGGAACATTGTCGATTTTGCGCGCATTGC‑TGGTG‑GCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGcc                                                                                                                <  1:545063/143‑1 (MQ=255)
                                 gTTTCATTTGTTCCAGAGGAACATTGTCGATTTTTCACGCAGTGC‑TGGTG‑GCTGGGAGTCACCGGAATGGGTGATTTTTTAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTACACGGCCt                                                                                                               >  1:246069/1‑143 (MQ=255)
                                  tttCATTTGTTCCAGAGGAACATTGTCGATTTTTCGCGCATTGC‑TGGTG‑GCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTa                                                                                                              >  2:529446/1‑143 (MQ=255)
                                   ttCATTTGTTCCAGAGGAACATTGTCGATTTTTCGCGCATTGC‑TGGTG‑GCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGTGGGTTATTCTGCCTAc                                                                                                             >  2:714919/1‑143 (MQ=255)
                                   ttCATTTGTTCCAGAGGAACATTGTCGATTTTTCGCGCATTGC‑TGGTG‑GCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTAc                                                                                                             >  1:905560/1‑143 (MQ=255)
                                    tgaTTTGTTCCAGAGGAATATTGTCGATTTTTTGCGCATTTC‑TGGTG‑GCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACg                                                                                                            <  1:295123/141‑1 (MQ=255)
                                      ctgtataacgcaaaaatgtgacggagatctatattttttgtgtatgttttgttcaacctggatttcgagcgcgcctccaccaaagccggatatacctacccgtaggCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACg                                                                                                            >  2:360885‑M1/107‑143 (MQ=255)
                                       tttGTTCCAGAGGAACATTGTCGATTTTTCGCGCATTGC‑TGGTG‑GCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGggt                                                                                                         >  1:376453/1‑143 (MQ=255)
                                       tttGTTCCAGAGGAACATTGTCGATTTTTCGCGCATTGC‑TGGTG‑GCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGggt                                                                                                         >  1:235038/1‑143 (MQ=255)
                                        tggtagaagagGAAGATTGGCGATTGTGTGCGCATGGC‑GGGTG‑GCTGGGAATCACCTGAATGGGTGATTTTTGAAGTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGggta                                                                                                        <  1:695344/136‑1 (MQ=255)
                                          gTTCCAGAGGAACATTGTCGATTTTTCGCGCATTGC‑TGGTG‑GCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGggtggg                                                                                                      >  1:840179/1‑143 (MQ=255)
                                           ttCCAGCGCAACCTTGTCGATTTTTCGCGCATCGC‑TGGTG‑GCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGggtaggt                                                                                                     <  1:49259/143‑1 (MQ=255)
                                                 agGAACATTGGCGATTTTTCGCGCGTTGC‑TGGTG‑GCTGGGAATCACCTGAGTGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATcc                                                                                               <  2:522770/143‑1 (MQ=255)
                                                     aCATTGTCGATTTTTCGCGCATTGC‑TGGTG‑GCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGAGGCTTATCCGGCGTACGGGTAGGTATGTCCGGCt                                                                                           >  1:264451/1‑143 (MQ=255)
                                                      cATTGTCGATTTTTCGCGCATTGC‑TGGTG‑GCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTCTATCCGGGtt                                                                                          >  2:427537/1‑143 (MQ=255)
                                                          gtggagttttCGCGCATGGG‑TGGTG‑GCTGGGAATCACCTGAGTGGGTGATTTTTGAATTCCCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTtggt                                                                                      <  1:428595/137‑1 (MQ=255)
                                                          gTCGATTTTTCGCGCATTGC‑TGGTG‑GCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTCGTCTTGCCGGGTGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATCTCCGGCTCtggt                                                                                      >  2:661760/1‑143 (MQ=255)
                                                           tCGATTTTTCGCGCATTTC‑TGGTG‑GCTGGGAATGACCTGAATTGGTGATTTTTGAGTTACCGGGTTTGGTGCGGTTTGTCTTGCCTGAGCCGCCCCCAGGCGCGGACTATTCGGCATCCGGGTAGCTATACCCCGcctccgtc                                                                                     >  2:445607/1‑136 (MQ=255)
                                                           tCGATTTTTCGCGCATTGC‑TGGTG‑GCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCCAGCGCACATTACTCGGGCTGCGGGTGGGCATATCTGGCTTcggcg                                                                                     >  2:954314/1‑141 (MQ=255)
                                                           tCGATTTTTCGCGCATTGC‑TGGTG‑GCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCGTtggtg                                                                                     >  1:104013/1‑143 (MQ=255)
                                                           tCGATTTTTCGCGCATTGC‑TGGTG‑GCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTGTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTCTGCGGCCTACGGGGCGGTATATCCGGCCTaggtg                                                                                     >  2:310551/1‑143 (MQ=255)
                                                            cGATTTTTCGCGCATTGC‑TGGTG‑GCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTtggtgg                                                                                    <  1:794209/143‑1 (MQ=255)
                                                            cGATTTTTCGCGCATTGC‑TGGTG‑GCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGGTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTCtggtgg                                                                                    >  2:744112/1‑143 (MQ=255)
                                                             gATTTTTCGGGCGTTGC‑TGTTG‑GCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGa                                                                                   <  2:790138/143‑1 (MQ=255)
                                                                 tttggggcATGGG‑TGGTG‑GAGGGGAATCACCTGAAGGGGTGATTTGTGAATTACCGGCTTTGGGGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGgcg                                                                               <  1:113205/137‑1 (MQ=255)
                                                                   tggcgtATTGT‑TTGTG‑GTTGGTAGTCACCTGAATGGGTGAGTTTTGAATTACCGTCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGgcgcg                                                                             <  2:481099/141‑1 (MQ=255)
                                                                     gcgcATTGC‑TGGTG‑GCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATACGGCTTTGGTAGGGGCGCGCt                                                                           >  1:307454/1‑143 (MQ=255)
                                                                      tgccttGC‑TGGTG‑GCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTGGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTc                                                                          <  2:559730/139‑1 (MQ=255)
                                                                      cgcATTGC‑TGGTG‑GCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTc                                                                          >  1:329948/1‑143 (MQ=255)
                                                                      cgcACTGC‑TGGTG‑GCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTc                                                                          <  1:694062/143‑1 (MQ=255)
                                                                       gcATTGC‑TGGTG‑GCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTCGGTATACCCGGCTTTGGTGGAGGCGCGCTcc                                                                         >  2:12478/1‑143 (MQ=255)
                                                                       gcATTGC‑TGGTG‑GCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGCGGCGCGCTcc                                                                         >  1:148228/1‑143 (MQ=255)
                                                                          ttGC‑TGGTG‑GCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCaaa                                                                      <  2:687610/143‑1 (MQ=255)
                                                                            gC‑TGGTG‑GCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTCTGGTGGAGGCGCGCTCCAAATc                                                                    >  2:74235/1‑143 (MQ=255)
                                                                             c‑TGGTG‑GCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTCTTCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGCGGCGCGCTCCGAATcc                                                                   >  2:709589/1‑143 (MQ=255)
                                                                               tggtg‑gCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGACGCCAGGCGCGGCTGATCCGGCCTACGGGCAGGTATATCCGGCTTTGGTGGAGGCGAGCTCCGAAGCCa                                                                  >  2:798245/1‑143 (MQ=255)
                                                                                ggtg‑gCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAg                                                                 <  1:529446/143‑1 (MQ=255)
                                                                                ggtg‑gCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAg                                                                 <  1:401484/143‑1 (MQ=255)
                                                                                ggtg‑gCTGGGAACCACCTGAATGGGTGAGTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCTCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAg                                                                 <  1:73304/143‑1 (MQ=255)
                                                                                 gtg‑gCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAgg                                                                <  1:956679/143‑1 (MQ=255)
                                                                                      cTGGGAATCACCTGAATGGGTGATTTTTGAATTACAGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCAGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGa                                                            <  1:374817/143‑1 (MQ=255)
                                                                                       tGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGCTGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGCGGCGCGCTCCACATCCAGGTTGaa                                                           >  1:940376/1‑143 (MQ=255)
                                                                                       tGGGAAGGACGTGGATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTAGATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGaa                                                           <  2:905560/143‑1 (MQ=255)
                                                                                          gAATCACCTGAGTGGGTGATTTTTGAATTACCGGCGTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGGGGAGGCGCGCTCACAAACCAGGtgggaacc                                                        >  2:1214/1‑136 (MQ=255)
                                                                                            accACCTGAAGGGGTGATTGTGGAAGTGCCGGCTGTGGTGCGGTTTGTCTGGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACaaaa                                                      <  1:858417/141‑1 (MQ=255)
                                                                                            aacACCTTAATTGGTTATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACaaaa                                                      <  1:710108/141‑1 (MQ=255)
                                                                                            aTCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACaaaa                                                      <  1:964126/143‑1 (MQ=255)
                                                                                             tCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACACAAc                                                     >  1:790113/1‑143 (MQ=255)
                                                                                               aCCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGCTAGGTATATCCGGCTTTGGTGGAGCCGACCCCCACCTCCAGGCTGCCCAAcacac                                                   >  2:221170/1‑142 (MQ=255)
                                                                                                ccTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGGCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCGCCAAATCGAGGTTGAGCaaaagaga                                                  >  1:186297/1‑139 (MQ=255)
                                                                                                ccTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATa                                                  <  2:546369/143‑1 (MQ=255)
                                                                                                ccTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTAAAAAGGAATCCGTAATGGGAGATCCGGCTTTGGCGGCGGCGCGCTCCAAATCGAGGCTGAACAATACAtg                                                  >  1:225019/1‑142 (MQ=255)
                                                                                                  tGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCCGGTTGAACAAAACATcca                                                >  1:23699/1‑143 (MQ=255)
                                                                                                  tGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCCTTGGTGGAGGCGCGCTCCAACTCCAGGTCGAACAAAACATacc                                                >  1:896832/1‑142 (MQ=255)
                                                                                                    aaTGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGAGCGCTCCAAATCCAGGTTGAACAAAACCTAcaca                                              >  2:128034/1‑143 (MQ=255)
                                                                                                     aTGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCGACGGGTAGGTATATCCGGCATTAGTGGAGGCGCGCAGCAAAACCATGTTGAACAAAACATccacga                                             >  1:365226/1‑141 (MQ=255)
                                                                                                        gagcgcgcctccaccaaagccggatatacctacccgtaggCCGGATGCGCCGCCAGGCGCGGCTTa                                                                                                                       <  2:597102‑M1/26‑1 (MQ=255)
                                                                                                        gagcgcgcctccaccaaagccggatatacctacccgtaggCCGGATGCGCCGCCAGGCGCGGCTTa                                                                                                                       >  1:597102‑M1/41‑66 (MQ=255)
                                                                                                          tGAATTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCCCATCCAGGTTGGCCAAACCATACACaaaaact                                        >  1:20533/1‑141 (MQ=255)
                                                                                                             tttttAAATTACCGGCTTTGGTGCGGTTTGTTTTGCCGTATGTGCCGTCATGTGTGGTTTTTTCGGCTTACTTGTAAGTATGACCAGCTTTGGGGGAGGCGCGCGCCAAATCCAGGTTGAACAAAACATACACAAAAAAtata                                     <  1:722491/143‑1 (MQ=255)
                                                                                                             tctttGAATACCCGCCTTTGGTGCGGTTTAGCTGGCCGGATGCGCCGCCGGGCGCCGCTTATCCGGCCTCCGGGTACGTATATCCGGCTTGGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAAtata                                     <  2:521232/141‑1 (MQ=255)
                                                                                                                     ttACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCg                             <  1:6668/143‑1 (MQ=255)
                                                                                                                     ttACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGAGGAGGCCCGCCCCAAATCCCGGTTACACAACACATACACCCAAAACACAGATCTCCg                             >  2:86197/1‑143 (MQ=255)
                                                                                                                              ttGGTGCGGTTTGTATTGCCGGATGCGCCACCAGGCGCGGCTTATCCGGCCTACGGGTAGGCATATCCGGCTTTGGTGGAGGCACGCTGCAAAGTCAGGATGAACAAAGCATACACAACAAATATAGATATCCGACACAgttt                    >  2:914349/1‑143 (MQ=255)
                                                                                                                               tGGTTCGGACTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACAttttt                   <  1:18246/143‑1 (MQ=255)
                                                                                                                                 ttgtggcttGTCGTGCCGGAGGCGCCGCCAGGGGCGGCCTAGCCGGCCTACGGGTACGTATATCCGGCTTTGGTGGAGGCGCGCGCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGc                 <  2:976044/136‑1 (MQ=255)
                                                                                                                                 gggCGGTTGGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGc                 <  1:68542/141‑1 (MQ=255)
                                                                                                                                    gggTTTGTCTTGCCGGAGGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGTCGCGCGCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGtt              <  1:802354/142‑1 (MQ=255)
                                                                                                                                    gggTTTGTATTCCCGGATGCGCCGCCAGGGGCGGCTTAGCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGtt              <  2:633502/142‑1 (MQ=255)
                                                                                                                                    cGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGtt              <  1:856815/143‑1 (MQ=255)
                                                                                                                                       tttGTCTTGCGGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTtata           <  2:931369/143‑1 (MQ=255)
                                                                                                                                       tttGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGCGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTtata           >  2:295312/1‑143 (MQ=255)
                                                                                                                                       ggtggcgggCCGGAGGCGCGGCCAGGCGCGGCTGATCCGGCCGAGGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTtata           >  2:279871‑M1/10‑143 (MQ=255)
                                                                                                                                        ttGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTATAc          <  1:679743/143‑1 (MQ=255)
                                                                                                                                              tGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTCTTGCGTTCTACAGGAAg    >  2:580009/1‑143 (MQ=255)
                                                                                                                                                CCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTATACAGGAAGCt  <  2:850631‑M1/143‑1 (MQ=255)
                                                                                                                                                |                                                                                                                                              
AAGGCTTCATTTTTACCACCTTTATCAGGTTACGTTTCATTTGTTCCAGAGGAACATTGTCGATTTTTCGCGCATTGC‑TGGTG‑GCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTATACAGGAAGCT  >  NC_000913/4240016‑4240300

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.