| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,466,201 | T→C | 6.3% | pseudogene (810/2518 nt) | ydbA → | putative outer membrane protein, N‑terminal fragment |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,466,201 | 0 | T | C | 6.3% | 189.7 / 2.6 | 80 | pseudogene (810/2518 nt) | ydbA | putative outer membrane protein, N‑terminal fragment |
| Reads supporting (aligned to +/- strand): ref base T (19/52); new base C (4/2); total (25/55) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.15e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCA‑CCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCA > NC_000913/1466062‑1466338 | ccACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATCCCACCGGTACGCCCCACATCATGAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGAc < 1:878861/143‑1 (MQ=17) cacaGTAAACAACAATGGCAAAACCACCGTTGACGAGAAAGAATCCACCGGGACGGAAATCAACGGGAATAACGGGAAAGAGATTCAGGACGGCGATCTAGATGTCAGCGACGGCGGTCACGGTATTGATATCACCGGTGACa > 2:458850/1‑143 (MQ=17) acaGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAg < 2:861938/143‑1 (MQ=255) caGTAAACAAAAATGGCATAACCACCGTTGACGGTAAAGAGTACACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAgc < 2:123301/143‑1 (MQ=255) aacaacAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTAAGCGGAGGCAGTCACGGTATTGAGATAACCGGTGACAGcgcgtc > 1:345377/1‑141 (MQ=14) aacaaTGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTCCGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGTATGTCAGCGGCGGCGATCACGGTATTGATATCACCGGTGACAGCGCGACGGt > 1:699625/1‑143 (MQ=255) aacaaTGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTACTAACGGGAAAGTGATTAAGAACAGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGt > 1:244723/1‑143 (MQ=255) aacaaTGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGATGACAGCGCGACGGt > 1:97807/1‑143 (MQ=255) cagtGGTAATACCACCGTTGATGGTAAAGATTCCCCCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTgg < 2:181851/140‑1 (MQ=14) aactgCAAAACCACCGTTGCCGGTAACGCTTCCACCGGTACGGCAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGCCAGTGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGa < 1:272988/139‑1 (MQ=14) cAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTACTGATATCACCGGCGACAGCGCGACGGGGGATAACa > 2:27396/1‑143 (MQ=255) aaaCCACCGTTGATCGTACATATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAg < 2:302669/143‑1 (MQ=255) aaaCCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAg < 1:836137/143‑1 (MQ=255) aaaCCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAg < 2:547596/143‑1 (MQ=255) aaaCCACCGTGGACGGTAAAGAGTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAg < 1:203020/143‑1 (MQ=255) aaCCGCCGGTGACGGTAAAGATGCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAgg < 1:437818/143‑1 (MQ=255) aaCCACGGTTGACTGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAgg < 2:79176/143‑1 (MQ=255) aaCCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAgg < 1:950654/143‑1 (MQ=255) caccGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGCCGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATCTCACCGGTGACAGCGCGACGGTGGATAACAAGGGCa > 1:68324/1‑143 (MQ=255) ccGTTGACGGTAAAGATTCCACGGTTACGTAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCA‑cc < 2:238605/143‑1 (MQ=255) gTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCA‑CCAt < 1:899348/143‑1 (MQ=255) tGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCA‑ctttga < 2:754105/143‑6 (MQ=255) gACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCA‑CCATGAc < 2:60015/143‑1 (MQ=255) aCGGTAATGATTCCACGGGTACGGAAGTCAACGGTAATAACGGGAAAGTGATTGAGGACGGCGATCTGGATGTGAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCA‑CCATGAcc < 2:269264/143‑1 (MQ=14) aCGGTAAAGATCCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCA‑CCATGAcc < 1:751500/143‑1 (MQ=255) gTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACAGGGGACAGCGCGACGGCGGATCACAAGGGCA‑CCATGACCGTc > 2:531391/1‑143 (MQ=255) tAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCAACGGTGGATAACACGGGCA‑CCATGACCGTCa > 1:203562/1‑143 (MQ=255) tAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCA‑CCATGACCGTCa > 1:310433/1‑143 (MQ=21) cagtcttCCACCGGTACGGAAATCAACGGTAAGAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATACCCCCGGTGACAGCGCGATCGAGAAGAACAAGGGCA‑CCATGACCGTCAc < 2:863882/138‑1 (MQ=14) ccACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAgcg < 2:571446/102‑1 (MQ=17) ccACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAgcg > 1:571446/1‑102 (MQ=18) gccGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCA‑CCATGACCGTCACCGATCCGGa < 2:504358/142‑1 (MQ=255) gccGGTACGCAAATCAACGGTAATAACGGGAAAGTGATGCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCA‑CCATGACCGTCACCGATCCGGa < 2:505045/142‑1 (MQ=255) aCCGGTACGGAAGGCAACGGTAAGAACGGGAAAGTGATTCAGGACGGCGATCTGGATGGCAGCGGCGGCGGTCACTGTATTGGTATCACCGGTGACAGCGCGGCGGTGGATAACAAGGGCA‑CCATGACCGTCACCGATCCGGa < 2:118843/143‑1 (MQ=14) aCCGGTACGGAAATCAACGGTAATAACGGGAATGTGTTTTTTGACGGCGATCTGGATGTCAGCGGCGGCGGCCACGGTAGTGATAGCACCGGTGACAGCGCGACGGTGGATAACAAGGGCA‑CCATGACCGTCACCGATCCGGa < 1:468838/143‑1 (MQ=14) tggTACGTGAATCAACGGTAGTAACGGGAAAGTGATTCAGGACGGCGAGCTGGATGTCAGCGGCGGCGGTCAGGGTATTGATATCTCCGGTGCCAGCGCGACGGTGGATAACAAGGGCA‑CCATGACCGTCACCGATCCGGAGt < 2:218442/142‑1 (MQ=14) aCGTAAATCGACGGTAGTAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCA‑CCATGACCGTCACCGATCCGGAGTCCAt < 2:767893/143‑1 (MQ=255) aCGGAAATCAACGGTAATAACGGGAAGGTGAGTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACTGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCA‑CCATGACCGTCACCGATCCGGAGTCCAt < 1:255177/143‑1 (MQ=255) aCGGAAACCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGCCAGCGCGACGGTGGAATA‑GAGGGCATCCATGACCGTCACCGATCCGGAGTCCAt < 2:72556/143‑1 (MQ=14) cGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCA‑CCATGACCGTCACCGATCCGGAGTCCATg < 2:370532/143‑1 (MQ=40) aaTCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCA‑CCATGACCGTCACCGATCCGGAGTCCATGGGTa < 2:514510/143‑1 (MQ=255) aTCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCA‑CCATGACCGTCACCGATCCGGAGTCCATGGGTac > 1:357881/1‑142 (MQ=255) aaCGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCGACGGTGGATAACAAGGGCA‑CCATGACCGTCACCGATCCGGAGTCCATCGGTATCCa > 2:917210/1‑143 (MQ=18) aCGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGTTATTGACATCCCCGCGGGCAGCGCGACGGTGGATAACAAGGGCA‑CCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAg > 1:982742/1‑143 (MQ=11) cGGTAACAACGGGAAAGTGATTCCGGACGGCGATCTGGAGGTCAGCGGCGGCGGTCACGGTATTGATATCCCCGGTGACAGCGCGACGGTGGATAACAAGGGCA‑CCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGa < 1:690558/143‑1 (MQ=255) ggTAATAACGGGAAAGTGATGCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCA‑CCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGAt < 1:256760/143‑1 (MQ=255) gatgactggAAAGTGATTAGGGACGGCGAGCTGGATGTCTGCGGCGGCGGGCACGGTATTGGTGTATGCGTTGACACAACGACGGGCCAGTACAAGGGCG‑CCACGGCCGTCACCGATCCGGAGTCCATGGGTATCCAGACCGa < 2:961207/136‑1 (MQ=9) ataaCGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAggg < 1:28680/97‑1 (MQ=255) ataaCGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAggg > 2:28680/1‑97 (MQ=255) agcGGGACAGTGAGTCAGGACGGCGCTCGGGATGCCAGGGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATCACAAGGGCA‑CCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACgg < 2:241356/141‑1 (MQ=14) aaCGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCA‑CCATGACCGTCACCGATCCGGAGGCCATGGGTATCCAGATCGACgg > 2:769610/1‑143 (MQ=255) ccGGGGAAGTGGTTCAGGACGGCGATCTTGGCGTCAGGCGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATACCAAGCTCA‑CCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGt < 1:199646/142‑1 (MQ=14) gggAAAGTGATTCAGCACGGCGATCCGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCA‑CCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGa < 1:863991/143‑1 (MQ=255) gaGTGATTCAGGACGGCGAGCGGGTTGTCAGCGGCGGCGGTCACGGTATGGATATCACCGGTGACAGCGCGGCGGTGGATAACAAGGGCA‑CCATGACCGTCGCCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAg < 2:490055/142‑1 (MQ=14) aaGGGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCA‑CCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAg < 1:443163/143‑1 (MQ=255) ttCAGGACGGCGATCGGGGTGGCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCA‑CCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATc < 1:771252/143‑1 (MQ=255) gtCAGGACGGCGAGCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCA‑CCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATc < 1:487034/142‑1 (MQ=255) aCGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCA‑CCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAAt < 1:889325/143‑1 (MQ=255) ggCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCA‑CCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGGCTGACAGCGACAAGGCGGTCGTCagcaa > 2:831037/1‑139 (MQ=11) gATATGGATGGCAGCGGCGGCGGACATGGTATTGATGTCACCGGTGCGAGCGCGACGGTGGATAACAAGGGCA‑CCATGACCGGCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGa < 2:56432/143‑1 (MQ=14) gtgtGGATGGCAGCGGCGGCGGTCACGGTATTGGTATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCA‑CCATGACCGTCACCGATCCGGAGTCCATGGGTATCCATATCGACGGTGACAAGGCCATCGTCAATAACGaa < 1:55373/140‑1 (MQ=255) gtcgggATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGAGAACAAGGGCA‑CCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGaa < 2:594448/139‑1 (MQ=255) tCTGGATGCGAGCGGCGGCGTCCACGGGACATATAGCAGCACTGACAGCGCGACGGTGGATAACAAGGGCA‑CCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAg < 1:764689/143‑1 (MQ=14) cTGTATGTCCGCGGCGCAGTGCACGGTATTGATATCACCGGTGACAGCGCGACGGTGTATAACAAGGGCA‑CCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAgg < 1:494896/143‑1 (MQ=17) ggATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCA‑CCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCg > 2:962326/1‑143 (MQ=255) aGCGGCGGCGGTCACGGTATTGATCTCACCGGTGACAGCGCGACGGTGGATAACAAGGGCA‑CCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCAc < 1:821369/143‑1 (MQ=255) tcggtggcggTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCA‑CCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCAcc < 1:833738/142‑1 (MQ=255) gcggcggTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCA‑CCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATc < 1:654165/143‑1 (MQ=255) gTCACGGTATTGATATCACCGGTGACAGCGCGACGGAGGATAACAAGGGCA‑CCATGACCGTCACCGATCCGGAGGCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCCCCAAc > 1:638624/1‑143 (MQ=255) aCGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCA‑CCATGACCGTCACCGATCCGGAGTCCATCGGTATcc > 2:498307/1‑84 (MQ=25) cGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCA‑CCATGACCGTCACCGAt > 2:770454/1‑64 (MQ=255) ggTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCA‑CCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGGTCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCGCCATCACCAACGGTgg > 1:117089/1‑143 (MQ=255) ggTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCA‑CCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATTGACGGTGACAAGGCGATCGTCAATAACGAAGGCGACAGCACCGCCACCGACGgggg > 1:227279/1‑143 (MQ=14) aTTGATATCACCGGTGACAGCGCGACGGTGGATGACAAGGGCA‑CCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTggcac < 1:658601/143‑1 (MQ=255) aTTGAGATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCA‑CCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTggcac < 1:657480/143‑1 (MQ=255) gATCTCACCGGTGACAGCGCGACGGTGGATAACAAGGGCA‑CCATGACCGTCTCCGATCCCGACTCCATGGGTATCCAGATCGACGGTCACAAGGCCATCGTCCATAACGCAGGCGAGAGCACCATCACCAACGGTggcaccgg < 2:697360/143‑1 (MQ=17) gATATCACCGGGGACAGCGCGACGGTGGGTTGCCGCTGCA‑CCAGGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTggcaccgg < 2:433348/143‑1 (MQ=17) aCCGGTGACAGCGCGACGGTGGATAACAAGGGCA‑CCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCa > 1:730843/1‑143 (MQ=255) cGGTGACAGCGCGACGGTGGATAACAAGGGCA‑CCATGACCGTCACCGATCCGGAGTc < 2:772632/57‑1 (MQ=255) cGGTGACAGCGCGACGGTGGATAACAAGGGCA‑CCATGACCGTCACCGATCCGGAGTc > 1:772632/1‑57 (MQ=255) | CCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCA‑CCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCA > NC_000913/1466062‑1466338 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |