| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,954,274 | A→C | 5.1% | E266A (GAA→GCA) | ilvD → | dihydroxy‑acid dehydratase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,954,274 | 0 | A | C | 5.1% | 332.6 / 6.5 | 124 | E266A (GAA→GCA) | ilvD | dihydroxy‑acid dehydratase |
| Reads supporting (aligned to +/- strand): ref base A (64/50); new base C (4/3); total (69/55) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.80e-01 | |||||||||||
Only 100 of 128 total aligned reads displayed.
GGCTCGCTGCTGGCAACCCACGCCGACCGTAAGCAGCTGTTCCTTAATGCTGGTAAACGCATTGTTGAATTGACCAAACGTTATTACGAGCAAAACGACGAAAGTGCA‑CTGCCGCGTAATATCGCCAGTAAGGCGGCGTTTGAAAACGCCATGACGCTGGATATCGCGATGGGTGGATCGACTAACACCGTACTTCACCTGCTGGCGGCGGCGCAGGAAGCGGAAATCGACTTCACCATGAGTGATATCGATAAGCTTTCCCGCAAGGTTCCACAGCTGTGTAAA > NC_000913/3954132‑3954416 | ggCTCGCTGCTGGCAACCCACGCCGACCGTAAGCAGCTGTTCCTTAATGCTGGTAAACGCATTGTTGAATTGACCAAACGTTATTACGAGCAAAACGACGAAAGTGCA‑CTGCCGCGTAATATCGCCAGTAAGGCGGCGTTTGa < 2:672688/143‑1 (MQ=255) gcGCTGCGGGCAACCCACGCCGACCGTAAGCAGCTGTTCCTTAATGCTGGTAAACGCATTGTTGAATTGACCAAACGTTATTACGAGCAAAACGACGAAAGTGCA‑CTGCCGCGTAATATCGCCAGTAAGGCGGCGTTTGaaaa < 1:659260/142‑1 (MQ=255) cGCTGCTGGCAACCCCCGCCGACCGTAAGCAGCTGTTCCTTAATGCTGGTAAACGCATTGTTGAATTGACCAAACGTTATTACGAGCAAAACGACGCAAGTGCA‑CTGCCGCGTAATATCGCCAGTAAGGCGGCGTTTGAAAAc < 2:632457/143‑1 (MQ=255) cGCTGCTGGCAACCCACGCCGACCGTAAGCAGCTGTTCCTTAATGCTGGTAAACGCATTGTTGAATTGACCAAACGTTATTACGAGCAAAACGACGAAAGTGCA‑CTGCCGCGTAATATCGCCAGTAAGGCGGCGTTTGAAAAc < 1:548640/143‑1 (MQ=255) cGCTGCTGGCAACCCACGCCGACCGTAAGCAGCTGTTCCTTAATGCTGGTAAACGCATTGTTGAATTGACCAAACGTTATTACGAGCAAAACGACGAAAGTGCA‑CTGCCGCGTAATATCGCCAGTAAGGCGGCGTTTGAAAAc < 1:957567/143‑1 (MQ=255) gctgGCAACCCACGCCGACCGTAAGCAGCTGTTCCTTAATGCTGGTAAACGCATTGTTGAATTGACCAAACGTTATTACGAGCAAAACGACGAAAGTGCA‑CTGCCGCGTAATATCGCCAGTAAGGCGGCGTTTTCAAACGccg < 2:612208/143‑2 (MQ=255) ggggCAACGCACGCCGCCCGTAAGCAGCTGTTACTTAATGCTGTTAAACGCATTGTTGAATTGACCAAACGTTATTACGAGCAAAACGACGAAAGTTCA‑CTGCCGCGTAATATCGCCAGTAAGGCGGCGTTTTCAAACGccgc < 1:243891/141‑3 (MQ=255) tgGCAACCCACGCCGACCGTAAGCAGCTGTTCCTTAATGCTGGTAAACGCATCGTTGAATTGACCAAACGTTATTACGAGCAAAACGACGAAAGTGCA‑CTGCCGCGTAATATCGCCAGTAAGGCGGCGTTTGAAAACGCCATg > 2:403029/1‑143 (MQ=255) ggCAACCCACGCCGACCGTAAGCAGCTGTTCCTTAATGCTGGTAAACGCATTGTTGAATTGACCAAACGTTATTACGATCAAAACGACGAAAGTGCA‑CTGCCGCGTAATATCGCCAGTAAGGCGGCGTTTGAAAACGCCATGa < 1:408369/143‑1 (MQ=255) gCAACCCACGCCGACCGTAAGCAGCTGTTCCTTAATGCTGGTAAACGCATTGTTGAATTGACCAAACGTTATTACGAGCAAAACGACGAAAGTGCA‑CTGCCGCGTAATATCGCCAGTAAGGCGGCGTTTGAAAACGCCATGAc > 2:359681/1‑143 (MQ=255) aaCCCACGCCGACCGTAGGCAGCTGTTCCTTAATGCTGGTAAGCGCATTGTTGAATTGACCAAACGTTATTACGAGCAAAACGACGAAAGTGCA‑CTGCCGCGTAATAGCGCCAGTAAGGCGGCGTTTGAAAACGCCATGACGc < 2:275269/143‑1 (MQ=255) aaCCCACGCCGACCGTAAGCAGCTGTTCCTTAATGCTGGTAAACGCATTGTTGAATTGACCAAACGTTATTACGAGCAAAACGACGAAAGTGCA‑CTGCCGCGTAATATCGCCAGTAAGGCGGCGTTTGAAAACGCCATGACGc < 1:256292/143‑1 (MQ=255) cctggcGCAGAGCGTAAGCACCTGTTCATTAATGCTGGCAGACGCATTGTTGAATTGACCACACGTTATTACGAGCAAGACGACGAAAGTGCA‑CTGCCGCGTAATATCGCCAGTAAGGCGGCGTTTGAAAACGCCATGACGCt < 2:839713/138‑1 (MQ=255) aCCCACGCCGACCGTAAGCAGCTGTTCCTTAATGCTGGTCAACGCCTAGTTGAATTGACCAAACGTTATTACGAGCAAGACGACGAAAGAGCA‑CTGCCGCGTAATAGCGCAAACAAGGCAGCACATGAAAACGCCGCGACGca > 2:756124/1‑142 (MQ=255) ccACGCCGACCGTAAGCAGCTGTTCCTTAATGCTGGTAAACGCATTGTTGAATTGACCAAACGTTATTACGAGCAAAACGACGAAAGTGCA‑CTGCCGCGGAATGTCGCCAGCACGGCGGCGCTGGGAACCGCCAGGACGCTgg > 2:630629/1‑143 (MQ=255) gCCGAGCGTAAGCAGCTGTTCCTTAAGGCTGGTAAACGCATTGTTGAATTGACCAAACGTTATTACGAGCAAAACGACGAAAGTGCA‑CTGCCGCGTAATATCGGCAGTAAGGCGGCGTTTGAAAACGCCATGACGCTGGatat < 2:641832/143‑1 (MQ=255) aCCGTAAGCAGCTGTTCCTTAATGCTGGTAAACGCATTGTTTAATTGACCAAACGTTATTACGAGCAAAACGACGAAAGTGCA‑CTGCCGCGTAATATCGCCAGTAAGGCGGCGTTTGAAAACGCCATGACGCTGGATATcgcg < 1:119541/143‑1 (MQ=255) cGTAAGCAGCTGTTCCTTAATGCTGGTAAACGCATTGTTGAATTGACCAAACGTTATTACGAGCAAAACGACGAAAGTGCA‑CTGCCGCGTAATATCGCCAGTAAGGCGGCGTTTGAAAACGCCATGACGCTGGATATCCCGAt > 1:167899/1‑143 (MQ=255) gcagtggTTCCTTAATGCTGGTAAAGGCATTGTTGAATGGACCAAACGTTATTACGAGCAAAACGACGAAAGTGCA‑CTGCCGCGTAATATCGCCAGTAAGGCGGCGACCGACACCGCCATGACGCTGGATATCGCGATGGGTg < 2:120969/137‑1 (MQ=255) gcagcTGTTCCTTAATGCTGGTAAACGCATTGTTGAATTGACCAAACGTTATTACGAGCAAAACGACGAAAGTGCA‑CTGCCGCGTAGTAGCGCCAGTAGGCCCGCGAATCAAAACGCGCTGACACTGCATATCGCGATGGGTg > 2:955916/1‑143 (MQ=255) gcagcTGTTCCTTAATGCTGGTAAACGCATTGTTGAATTGACCAAACGTTATTACGAGCAAAACGACGAAAGTGCA‑CTGCCGCGTAATATCGCCAGTAAGGCGGCGTTTGAAAACGCCATGACGCTGGATATCGCGCTggcgc > 1:815706/1‑140 (MQ=255) gcagcTGTTCCTTAATGCTGGTAAACGCATTGTTGAATTGACCAAACGTTATTACGAGCAAAACGACGAAAGTGCA‑CTGCCGCGTAATATCGCCAGTAAGGCGGCGTTTGAAAACGCCATGACGCTGGATATCGCGATGGGTg < 1:93432/143‑1 (MQ=255) gcagcTGTTCCTTAATGCTGGTAAACGCATTGTTGAATTGACCAAACGCTATTACGAGCAACACGACGAAAGTGCA‑CTGCCGCGTAATATCGCCAGTAAGGCGGCGTTTGAAAACGCCATGACGCTGGATATCGCGATGGGTg > 2:942311/1‑143 (MQ=255) gcagcTGTTCCTTAATGCTGGTAAACGCATTGTTGAATTCACCAAACGTTATTACGAGCAACACGACGCAAGTGCA‑CTGCCGCGTAATATCGCCAGTAAGGCGGCGCTTGACAACGCCATGACGCTGCAGATCGCGATgcgag > 2:299126/1‑139 (MQ=255) gcagcTGTGCCTTAATGCTGGTAAACGCATTGTTGAATTGACCAAACGTTATTACGAGCAAAACGACGAGAGTGCA‑CTGCCGCGTAATATCGCCAGTAAGGCGGCGTTTGAAAACGCCATGACGCTGGATATCGCGATGGGTg < 2:482028/143‑1 (MQ=255) cTGTTCCTTAATGCTGGTAAACGCATTGTTGAATTGACCAAACGTTATTACGAGCAAAACGACGAAAGTGCA‑CTGCCGCGTAATATCGCCAGTAAGGCGGCGTTTGACAACGCCATGGAGCTGGACATCGCGAGGGGTGGATc > 2:339467/1‑143 (MQ=255) cTGTTCCTTAATGCTGGTAAACGCATTGTTGAATTGACCAAACGTTATTACGAGCAAAACGACGAAAGTGCA‑CTGCCGCGTAATATCGCCAGTAAGGCGGCGTTTGAAAACGCCATGACGCTGGATATAGGGCGGGGTGGacg > 2:362778/1‑141 (MQ=255) cTGGTCCTTAATGCTGGTAAACGCATTGTTGAATTGACCAAACGTTATTACGAGCAAACCGAC‑ACTTTGGATATCTCCCGTAATCTAAATGGTTAGCCTGCGTTTGAAAACGCCATGACGCTGGATATCGCGATGGGTGGATc < 1:723762/143‑1 (MQ=255) gTTCCTTAATGCTGGTAAACGCATTGTTGAATTGACCAAACGTTATTACGAGCAAAACGACGAAAGTGCA‑CTGCCGCGTAATATCGCCAGTAAGGCGGCGTTTGAAAACGCCATGACGCTGGATATCGCGATGGGTGGATCGa > 1:377219/1‑143 (MQ=255) gTTCCTTAATGCTGGTAAACGCATTGTTGAATTGACCAAACGTTATTACGAGCAAAACGACGAAAGTGCA‑CTGCCGCGTAATATCGCCAGTAAGGCGGCGTTTGAAAACGCCATGACGCTGGATATCGCGATGGGTGGATCGa < 1:572404/143‑1 (MQ=255) gTTCCTTAATGCTGGTAAACGCATTGTTGAATTGACCAAACGTTATTACGAGCAAAACGACGAAAGTGCA‑CTGCCGCGTAATATCGCCAGTAAGGCGGCGTTTGAAAACGCCATGACGCTGGATATCGCGATGGGTGGATCGa < 1:568404/143‑1 (MQ=255) ttcTTAATGCTGGTAAACGCATTGTTGAATTGACCAAACGTTAATACGAGCAAAACGACGAAAGTGCA‑CTGCCGCGTAATATCGCCAGTAAGGCGGCGTTTGAAAACGCCATGACGCTGGATATCGCGATGGGTGGATCGACt < 1:284527/141‑1 (MQ=255) cgtAATGCCGGCACACGCCTTGTTGAACTGACCAAACGTTATTACGAGCAAATGGACGAAAGTGCA‑CTGCCGCGTAATATCGCCCGTACGGCGGCGTTTGAAAACGCCATGACGCTGGATATCGCGATGGGTGGATCGACTaa < 2:804090/141‑1 (MQ=255) cTTAATGCTGGTAAACGCATTGTTGAATTGACCAAACGTTATTACGAGCAAAACGACGAAAGTGCA‑CTGCCGCGTAATATCGCCAGTAAGGCGGCGTTTGCCTGAGGCGCGACGCGGGATATCGCGATGGGTGGATCGACTaa > 2:694856/1‑143 (MQ=255) cTTAATGCTGGTAAACGCATTGTTGAATTGACAAAACGTTATTACGAGCAAAAAGACGAAAGTGAA‑CTGAAGAGGAATATCGACAGTAAGGCGGCGTTTGAAAACGCCATGAAGCAGGATATCGCGCTGGGTGGATCGACTaa > 2:488140/1‑143 (MQ=255) ttAATGCTGGTAAACGCATTGTTGAATTGACCAAACGTTATTACGAGCAAAACGACGAAAGTGCA‑CTGCCGCGTAATATCGCCAGTAAGGCGGCGTTTGAAAACGCCATGACGCTGAATATCGCGATGGGTGGATCGACGAac > 2:825324/1‑143 (MQ=255) aaTGCTGGTAAACTGAGTGTTGAATTGCCCAAACGTGTGTACGAGCAAGACGACGAACGTGCA‑CGGCCGCGCAATATCGCCAGGAAGGCGGCGTTTGAAAACGCCATGACGCTGGATATCGCGATGGGTGGATCGACTAacac < 2:225193/143‑1 (MQ=255) tGGTAAACGCATTGTTGAATTGACCAAACGTTATTACGAGCAAAACGACGAAAGTGCA‑CTGCCGCGTAATATCGCCAGTAAGGCGGCGTTTGAAAACGCCATGACGCTGGATATCGCGATGGGTGGATCGACTAACACCGTAc < 1:294729/143‑1 (MQ=255) gTAAACGCATTGTTGAATTGACCAAACGTTATTACGAGCAAAACGACGAAAGTGCA‑CTGCCGCGTAATATCGCCAGTAAGGCGGCGTTTGAAAACGCCATGACGCTGGATATCGCGATGGGGGGATCGACTAACACCGTACtt > 1:254805/1‑143 (MQ=255) gTAAACGCATTGTTGAAGTGACCAAACGTTATTACGAGCAAAACGACGAAAGTGCA‑CTGCCGCGTACTAGCGCCAGTAAGGCGGCGTTTGAAAACGCCATGACGCTGGATATCGCGATGGGTGGATCGACTAACACCGTACtt < 2:35448/143‑1 (MQ=255) gCATTGTTGAATTGACCAAACGTTATTACGAGCAAAACGACGAAAGTGCA‑CTGCCGCGTAATATCGCCAGAAAGGCGGCGTTTGAAAACACCATGACGCTGGATATCGCGATGGGTGGATCGAATAACACGATACTTCACctg > 2:549891/1‑143 (MQ=255) aTTGTTGAATTGACCAGAATTATTTGCGGGGAAAACGACGAAAGTGCA‑CTGCCGCGTAATATCGCCAGTAAGGCGGCGTTTGAAAACGCCATGACGCTGGATATCGCGATGGGTGGATCGACTAACACCGTACTTCACctgct < 1:924224/143‑1 (MQ=255) aTTGTTGAATTGACCAAACGTTATTACGAGCAAAACGACGAAAGTGCA‑CTGCCGCGTAATATCGCCAGTAAGGCGGCGTTTGAAAACGCCATGACGCTGGATAACGCGATGGGCGGATCGACTAACACCGTACTTCACctgct > 2:8996/1‑143 (MQ=255) tgttgGATTGACCGATCGTTCTTACGGGCAAAACGACGAAAGTGCA‑CTGCCGCGTAATATCGCCAGTCAGGCGGCGTTTGAAAACGCCATGACGCTGGATATCGCGATGGGTGGATCGACTAACACCGTACTTCACCTGCTgg < 2:36271/143‑1 (MQ=255) gttgAATTGACCAAACGTTATTACGAGCAAAACGACGAAAGTGCA‑CTGCCGCGTAATATCGCCAGTAAGGCGGCGTTTGAAAACGCCATGACGCTGGATAGCGCGATGGGTGGGTCGACTAACACCGTACTTCACCTGCTggc > 2:889259/1‑143 (MQ=255) ttgAATTGACCAAACGTTATTACGAGCAAAACGACGAAAGTGCA‑CTGCCGCGTAATATCGCCAGTAAGGCGGCGTTTGAAAACGCCATGACGCTGGATGTCGCGATGGGTGGATCGACTAACACCGTACTTCACCTGCTggcg > 1:83786/1‑143 (MQ=255) ttgAATTGACCAAACGTTATTACGAGCAAAACGACGAAAGTGCA‑CTGCCGCGTAATATCGCCAGTAAGGCGGCGTTTGAAAACGCCATGACGCTGGATATCGCGATGGGTGGATCGACTAACACCGTACTTCACCTGCTggcg > 1:880074/1‑143 (MQ=255) ttgAATTGACCAAACGTTATTACGAGCAAAACGACGAAAGTGCA‑CTGCCGCGTAATATCGCCAGTAAGGCGGCGTTTGAAAACGCCATGACGCTGGATATCGCGAAGGGTGGATCGACTAACACCGTACTTCACCTGCTggcg > 2:123002/1‑143 (MQ=255) ttgAATTGACCAAACGTTATTACGAGCAAAACGACGAAAGTGCA‑CTGCCGCGTAATATCGCCAGTAACGCGGCGTTTGAAAACGCCATGACGCTGCATATCGCGATGGGTGGCTCGACTGATACCGTACTTCACCTGCTcgcg > 2:37847/1‑143 (MQ=255) tgAATTGACCAAACGTTAGTACGAGCAAAACGACGAAAGTGCA‑CTGCCGCGTAATATCGCCAGTAAGGCGGCGTTTGAAAACGCCATGACGCTGGATATCGCGATGGGTGGATCGACTAACACCGTACTTCACCTGCTggcgg < 1:608283/143‑1 (MQ=255) aaTTGACCAAACGTTATTACGAGCAAAACGACGAAAGTGCA‑CTGCCGCGTAATATCGCCAGTAAGGCGGCGTTTGAAAACGCCATGACGCTGGATATCGCGATGGGTGGATCGACTAACACCGTACTTCACCTGCTggcggcg < 1:237999/143‑1 (MQ=255) aTTGACCAAACGTTATTACGAGCAAAACGACGAAAGTGCA‑CTGACGCGTAATATCGCCAGTAAGGCGGCGTTTGAAAACGCCATGACGCTGGATATCGCGGTGGGTGGATCGACTAACACCGTACTTCACCTGCTcgcggcgg > 2:418804/1‑143 (MQ=255) tGACCAAACGTTATTACGAGCAAAACGACGAAAGTGCA‑CTGCCGCGTAATATCGCAAGTAAGGCGGCGTTTGAAAACGCCATGCCGCTGGATATCGCGATGGGTGGATCGACTAACACCGTACTTCAGCTGCTGgcggcggcg > 1:117388/1‑143 (MQ=255) gccaggcGTTATTACGAGCAAAACGACGAAAGTGCA‑CTGCCGCGTAATATCGCCAGGAAGGCGGCGTTTGAAAACGCCATGACTCTGGTTATCGCGATGGGTGTATCGACTAACACCGTACTTCACCTGCTGGCGGCGGCGCa < 1:160179/137‑1 (MQ=255) aCCAAACGTTAGTACGAGCAAAACGACGAAAGTGCA‑CTGCCGCGTAATATCGCCAGTAAGGCGGCGTTTGAAAACGCCATGACGCTGGATATCGCGATGGGTGGATCGACTAACACCGTACTTCACCTGCTGGCGGCGGCGCa < 1:631119/143‑1 (MQ=255) cAAACGTTATTACGAGCAAAACGACGAGAGAGCA‑CTGCCGCGTAATATAGCCAGTACGGCGGGGTTTGAAAAAGCCAGGACGGTGGATCTCGCGGTGGGTGGATCGACAAAAATCGTAATTCACACGCCAGAGGCGGCTCAgg > 2:738703/1‑143 (MQ=255) cAAACGTTATTACGAGCAAAACGACGAAAGTGTA‑CTGCCGCGTAATATCGCCAGTAAGGCGGCGTTTGAAAACGCCATGACGCTGGATATCGCGATGGGTGGATCGACTAACACCGTACTTCACCTGCTGGCGGCGGCGGAgg > 1:214783/1‑143 (MQ=255) cAAACGTTATTACGAGCAAAACGACGAAAGTGCA‑CTGCCGCGTAATATCGCCAGTAAGGCGGCGTTTGAAAACGCCATGACGCTGGATATCGCGATGGGTGGATCGACTAACACCGTACTTCACCTGCTGGCGGCGGCGCAgg > 1:570102/1‑143 (MQ=255) cAAACGTTATTACGAGCAAAACGACGAAAGTGCA‑CTGCCGCGTAATATCGCCAGTAAGGCGGCGGTTGAAAACGCCATGACGCTGGATATCGCGATGGGTGGATCGACTAACACCGTACTTCACCTGCTGGCGGCGGCGCAgg < 1:226256/143‑1 (MQ=255) gTTATTACGAGCAAAACGACGAAAGTGCC‑CTCCCGCGTAATATCGCCAGTAAGGCGGCGTTTGAAAACGCCATGACGCTGGATATCGCGATGGGTGGATCGACTAACACCGTACTTCACCTGCTGGCGGCGGCGCAGGAAGCg < 1:355519/143‑1 (MQ=255) ttaCGAGCAAAACGACGAAAGTGCA‑CTGCCGCGTAATATAGCCGGTAAGGCGGCGTTGGAAAACGCCATGACGCTGGATATCGCGAGGGGTGGATCGACTAACACCGGACTTCACCTGCTGGCGGCGGGGCAGGAATCgcaga > 2:1020/1‑139 (MQ=255) ttaAGAGCGAAACGACGAAAGTGCA‑CTGCCGCGTAATATCGCCAGTAAGGCGGCGTTTGAAAACGCCATGACGCTGGATATCGCGATGGGTGGATCGACTAACACCGCACTTCACCTGCTGGCGGCGGCGCAGGAAGCgcgaa > 2:752949/1‑139 (MQ=255) aCGAGTAAAACGACGAAAGTGCA‑CTGCCGCGTAATATCGCCAGTAAGGCGGCGTTTGAAAACGCCATGACGCTGGATATCGCGATGGGTGGATCGACTAACACCGTACTTCACCTGCTGGCGGCGGCGCAGGAAGCGGAAATc < 2:743232/143‑1 (MQ=255) gAGCAAAACGACGAAAGTGCA‑CTGCCGCGTAATATCGCCAGTAAGGCGGCGTTTGAAAACGCCATGACGCTGGATATCGCGATGGGTGGATGGAATAACGCCGTACTTGGATTGCTGTCGCTGGCGCAGGAGGCGGAATTCgc > 1:616061/1‑142 (MQ=255) gCAAAACGACGAAAGTGCA‑CTGCCGCGTAATATCGCGAGTAAGGCGGCGTTTGAAAACGCCGTGACGCTGGATATCGCGATGGGTGGATCGACTAACACCGTACTTCACCTGCTGGCGGCGGCGCAGGGAGCGGGAATCAAcc > 2:568722/1‑142 (MQ=255) gCAAAACGACGAAAGTGCA‑CTGCCGCGTAATATCGCCAGTAAGGCGGCGTTTGAAAACGCCATGACGCTGGATATCGCGATGGGTGGATCGACTAACACCGTACTTCACCTGCTGGCGGCGGCGCAGGAAGCGGAAATCGACt > 1:623971/1‑143 (MQ=255) cAAAACGACGAAAGTGCA‑CTGCCGCGTAATATCGCCAGTAAGGCGGCGTTTGAAAACGCCATGACGCTGGATATCGCGATGGGTGGATCGACTAACACCGTACTTCACCTGCTGGCGGCGGCGCAGGAAGCGGAAATCGACtt < 1:174581/143‑1 (MQ=255) aaaCGACGAAAGTGCA‑CTGCCGCGTAATATCGCCAGTAAGGCGGCGTTTGAAAACGCCATGACGCTGGATATCGCGATGGGTGGATCGACTAACCCCGTACTTCACCTGCTGGCGGGGGCGCAGGAAGCGGAAATCGACTCCa > 2:283360/1‑143 (MQ=255) aaaCGACGAAAGTGCA‑CTGCCGCGTAATATCGCCAGTAAGGCGGCGTTTGAAAACGCCATGACACTGGATATCGCGATAGAAAAAACAACTAACACCGAAATTCACCTGCTGGCGGCGGCGCCGGAAGCGGAAATCGACTTCa > 1:768990/1‑143 (MQ=255) aaCGACGAAAGTGCA‑CTGCCGCGTAATATCGCCAGTAAGGCGGCGTTTGAAAACGCCATGACGCTGTATATCGCGATGGCTGGATCGACTAACACCGTACCTCACCTGCTGGCGGCGGCGCAGGCAGCGGCAATCGACCTCAc > 2:14235/1‑143 (MQ=255) cgacgaAAGTGCA‑CTGCCGCGTAATATCGCCAGTAAGGCGGCGTTTGAAAACGCCATGACGCTGGATATCGCGATGGGTGGATCGACTAACACCGTACTTCACCTGCTGGCGGCGGCGCAGGAAGCGGAAATCGACTTCACCa < 1:823349/143‑1 (MQ=255) ccaaaGTGCA‑CTGCCGCCTAATATCGCCAGTAAGGCGGCGTTTGAAAACGCCATGACGCTGGATATCGCGATGGGTGGATCGACTAACACCGTACTTCACCTGCTGGCGGCGGCGCAGGAAGCGGAAATCGACTTCACCATGa < 1:568722/141‑1 (MQ=255) gaAAGTGCA‑CTGCCGCGTAATATCGCCAGTAAGGCGGCGTTTGAAAACGCCATGACGCTGGATATCGCGATGGGTGGATCGACTAACACCGTACTTCACCTGCTGGCGGCGGCGCAGGAAGCGGAAATCGACTTCACCATGAg > 1:351775/1‑143 (MQ=255) gaAAGTGCA‑CTGCCGCGTAATATCGCCAGTAAGGCGGCGTTTGAAAACGCCATGACGCTGGATATCGCGATGGGTGGATCGACTAACACCGTACTTCACCTGCTGGCGGCGGCGCAGGAAGCGGAAATCGACTTCACCATGAg > 1:20178/1‑143 (MQ=255) catgTGCG‑CTGCTGCGTACTATCGCGAGGAAGGCGTCGTTTGGAAACGCCATGACGGTCGCTATCGCGATGCGTGGATCGACTAACACAGTACTTCACCTGCTGGCGGCGGCGCAGGAAGCGGAAATCGACTTCACCATGAGt < 2:899467/140‑1 (MQ=255) aaaGTGCA‑CTGCCGCGTAATATCGCCAGTAAGGCGGCGTTTGAAAACGCCATGACGCTGGATATCGCGATGGGTGGATCGACTAACACCGTACTTCACCTGCTGGCGGCGGCGCAGGAAGCGTAAATCGACTTCACCATGAGt < 2:865106/143‑1 (MQ=255) gtggCA‑CTGCCGCGTAGTTTCGCGAGTTGGGCGGCGGTTGGAAACGCCATTACGCTGGATATCGCGATGGGTGGATCGACGAACGCCGAACGTCACCGGCGGGCGGCGGCGCAGGAAGCGGAAATCGACTTCACCATGAGTGa < 2:281961/140‑1 (MQ=255) tGCA‑CTGCCGCGTAATATCGCCAGTAAGGCGGCGTTTGAAAACGCCATGACGCTGGATATCGCGATGGGTGGATCGACTAACACCGTACTTCACCTGCTGGCGGCGGCGCAGGAAGCGGAAATCGACTTCACCATGAGTGata > 1:130479/1‑143 (MQ=255) a‑CTGCCGCGTAATATCGCCAGTAAGGCGGCGTTTGAAAACGCCATGACGCTGGATATCGCGATGGGTGGATCGACTAACACCGTACTTCACCTGCTGGCGGCGGCGCAGGAAGCGGAAATCGACTTCACCATGAGTGATATCg < 1:765775/143‑1 (MQ=255) tGCCGCGTAATATCGCCAGTAAGGCGGCGTTTGAAAACGCCATGACGCTGGATATCGCGATGGGTGGATCGACTAACACCGTACTTCACCTGCTGGCGGCGGCGCAGGAAGCGGAAATCGACTTCACCATGAGTGATGTCGAt > 1:457543/1‑143 (MQ=255) ccGCGTAATATCGCCAGTAAGGCGGCGTTTGAAAACGCCATGACGCTGGATATGGCGATGGGTGGCTCGACTAGCACCGTACTTCACCTGCTGGCGGCGGCGCAGGCGGCGGACATCGACTTCACCATGCGTGTTATCGAtca > 1:768977/1‑141 (MQ=255) ccGCGTAATATCGCCAGTAAGGCGGCGTTTGAAAACGCCATGACGCTGGATATCGCGATGGGTGGATCGACTAACACCGTACTTCACCTGCTGGCGGCGGCGCAGGAAGCGGAAATCGACTTCACCATGAGTGATATCGATaa < 1:111877/143‑1 (MQ=255) ccGCGTAATATCGCCAGTAAGGCGGCGTTTGAAAACGCCATGACGCTGGATATCGCGAGGGGTGGATCGACTAACACCGTCCTTCACCTGCTGGCGGCGGCGCAGGAAGCGGAACTCGACCTCACCAAGAGTGatatagcgca > 2:943070/1‑137 (MQ=255) tAATATCGCCAGTAAGGCGGCGTTTGAAAACGCCATGACGCTGGATATCGCGATGGGTGGATCGACTAACACCGTACTTCACCTGCTGGCGGCGGCGCAGGAAGCGGAAATCGACTTCACCATGAGTGATATCGATAAGCttt > 1:211959/1‑143 (MQ=255) atatCGCCAGTAAGGCGGCGTTTGAAAACGCCATGACGCTGGATATCGCGATGGGTGGATCGACTAACACCGTACTTCACCTGCTGGCGGCGGCGCAGGAAGCGGAAATCGACTTCACCATGAGTGATATCGATAAGCTTTcc > 1:751581/1‑143 (MQ=255) atCGCCAGTAAGGCGGCGTTTGAAAACGCCATGACGCTGGATATCGCGATGGGTGGATCGACTAACACCGTACTTCACCTGCTGGCGGCGGCGCAGGAAGCGGAAATCGACTTCACCATGAGTGCTCTCGATCAGCTCTCCCg > 1:648164/1‑143 (MQ=255) tCGCCAGTAAGGCGGCGTTTGAAAACGCCATGACGCTGGATATCGCGATGGGTGGATCGACTAACACCGTACTTCACCTGCTGGCGGCGGCGCAGGAAGCGGAAATCGACTTCACCATGAGTGATATCGATAAGCTTTCCCGc > 1:939427/1‑143 (MQ=255) cGCCAGTAAGGCGGCGTTTGAAAACGCCATGACGCTGGATATCGCGATGGGTGGATCGACTAACACCGTACTTCACCTGCTGGCGGCGGCGCAGGAAGCGGAAATCGACTTCACCATGAGTGATATCGATAAGCTTTCCCGCa > 1:736902/1‑143 (MQ=255) tgaGGGGGCGTTGGAAAACGCCATGACGCTGGATATCGCGATGGGTGGATCGACTAACACCGTACCTCACCTGCTGGCGGCGGCGCAGGAAGCGGAAATCGACTTCACCATGAGTGATATCGATAAGCTTTCCCGCAAGGTTc < 2:351168/141‑1 (MQ=255) tAAGGCGGCGTTTGAAAACGCCATGACGCTGGATATCGCGATGGGTGGATCGACTAACACCGTACTTCACCTGCTGGCGGCGGCGCAGGAAGCGGAAATCGACTTCACCATGAGTGATATCGATAAGCTTTCCCGCAAGGTTc > 1:920243/1‑143 (MQ=255) gtcatggcgTTTTCAAACGCCATGACGCTGGATATCGCGATGGGTGGATCGACTAACACCGTACTTCACCTGCTGGCGGCGGCGCAGGAAGCGGAAATCGACTTCACCATGAGTGATATCGATAAGCTTTCCCGCAAGGTTcc > 1:760541/6‑143 (MQ=255) aGGCGGCGTTTGAAAACGCCATGACGCTGGATATCGCGATGGGGGGATCGACTAACACCGTACTGCACCTGCTGTCGGCGGGGCAGGAAGCGGAAATCGACGTCACCATGAGTGGTCTCGATAAGCTTTCCCGCGGGGGTCca > 1:653250/1‑143 (MQ=255) tggcgTTTTCAAACGCCATGACGCTGGATATCGCGATGGGTGGATCGACTAACACCGTACTTCACCTGCTGGCGGCGGCGCAGGAAGCGGAAATCGACTCCACCCTGAGTGATATCGATAAGCGTTCCCGCAGGGTGCGACAg > 2:230100/2‑143 (MQ=255) cggcgTTTGAAAACGCCATGACGCTGGATATCGCGATGGGTGGATGGGGTAACACCGTACTTAACATGCGGGGGGCGGGGCAGGAAGCGGAGAGCGACTTCACCATGCGTGATAGCGATAAGCGTTCCAGGAAGGTTCCACAg > 2:322291/1‑143 (MQ=255) gcgTTTGAAAACGCCATGACGCTGGATATCGCGATGGGTGGATCGACTAACACCGTACTTGACCTGCTGGCGGCGGCGCAGGAAGCGGAAATCGACTTCACCATGAGTGATATCGATAAGCTTTCCCGCGAGGTTCAACAGCt > 2:215946/1‑143 (MQ=255) gcgTTTGAAAACGCCATGACGCTGGATATCGCGATGGGTGGATCGACTAACACCGTACTTCACCTGCTGGCGGCGGCGCAGGAAGCGGAAATCGACTTCACCATGAGTGATATCGATAAGCTTTCCCGCAAGGTTCCACAGCt < 1:352782/143‑1 (MQ=255) gcgTTTGAAAACGCCATGACGCTGGATATCGCGATGGGTGGATCGACTAACACCGTACTTCACCTGCTGGCGGCGGCGCAGGAAGCGGAAATCGACTTCACCATGAGTGATATCGATAAGCTTTCCCGCAAGGATCCACCGCt > 2:14225/1‑143 (MQ=255) cgTTTGAAAACGCCATGACGCTGGATATCGCGATGGGTGGATCGACTAACACCGTACTTCACCTGCTGGCGGCGGCGCAGGAAGCGGAAATCGACTTCACCATGAGTGATATCGATAAGCTTTCCCGCAAGGTTCCACAGCtg > 1:846443/1‑143 (MQ=255) tGAAAACGCCATGACGCTGGATATCGCGATGGGTGGATCGACTAACACCGTACTTCACCTGCTGGCGGCGGCGCAGGAAGCGGAAATCGACTTCACCATGAGTGATATCGATAAGCTTTCCCGCAAGGTTCCACAGCTGTGTa > 1:281708/1‑143 (MQ=255) aaaaCGCCATGACGCTGGATATCGCGATGGGTGGATCGACTAACACCGTACTTCACCTGCTGGCGGCGGCGCAGGAAGCGGAAATCGACTTCACCATGAGGGATATCGATAAGCTGTAACGCACGGGTCCACAGCTGTGCaaa > 2:884610/1‑143 (MQ=255) | GGCTCGCTGCTGGCAACCCACGCCGACCGTAAGCAGCTGTTCCTTAATGCTGGTAAACGCATTGTTGAATTGACCAAACGTTATTACGAGCAAAACGACGAAAGTGCA‑CTGCCGCGTAATATCGCCAGTAAGGCGGCGTTTGAAAACGCCATGACGCTGGATATCGCGATGGGTGGATCGACTAACACCGTACTTCACCTGCTGGCGGCGGCGCAGGAAGCGGAAATCGACTTCACCATGAGTGATATCGATAAGCTTTCCCGCAAGGTTCCACAGCTGTGTAAA > NC_000913/3954132‑3954416 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |