| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2543861 | 23 (0.660) | 3 (0.090) | 3/252 | NT | 12.3% | coding (763/792 nt) | ucpA | putative oxidoreductase |
| ? | NC_000913 | = 2543865 | 21 (0.630) | coding (759/792 nt) | ucpA | putative oxidoreductase | |||||
AGGATTTCGAGCACTGCCCGGGGCCAAAATGACAAATAAAATAGCCTGGTGAACTTAGTTCAAGACGAAATCCTCCCCACAAATGCAGGGAGGAAACAGAGGTGAATCAGATACCGACGCTAACCGTCTCCGGCAGTGTGCTGCCGCCATCAATCACATTCTGTGTACCGGTTAAATAGCTGGATTCATCCGATGCGAGGAAGGCCGCCAGTTCGCCGACTTCCAGCGGATCGGCGAGGCGACGCATCGGGATTGCTTTCGCCATTTCAGTC > NC_000913/2543726‑2543997 | aGGATTTCGAGCACTGCCCGGGGCCAAAATGACAAATAAAATAGCCTGGTGAACTTAGTTCAAGACGAAATCCTCCCCACAAATGCAGGGAGGAAACAGAGGTGAATCAGATACCGACGCTAACCGTCTGCGGCAGTGTGctg < 2:132542‑M2/143‑4 (MQ=255) gATTTCGAGCACTGCCCGGGGCCAAAATGACAAATAAAATAGCCTGGTGAACTTAGTTCAAGACGAAATCCTCCCCACAAATGCAGGGAGGAAACAGAGGTGAATCAGATACCGACGCTAACCGTCTCCGGCAGTGTGctgcc < 1:373582‑M2/143‑6 (MQ=255) tttCGAGCACTGCCCGGGGCCAAAATGACAAATAAAATAGCCTGGTGCACTTAGTTCAAGACGAAATCCTCACCACAAAGACAGGGCGGGCCCACACGTGAGAGAGCTACCAACCCTAACCGTCAGCGGCAGTGtgctcgcgc > 2:6935/1‑138 (MQ=19) cGAGCACTGCCCAGGGCCAAAATGACAAAGAAAATAGCCTGGTGAACTTAGTTCAAGACGAAATCCTCCCCACAAATGCAGGGAGGAAACAGAGGTGAATCAGATACCGACGCTAACCGTCTCCGGCAGTGTGCTGCCGCCat < 1:32344/143‑1 (MQ=255) cACTGCCCGGGGCCAAAATGACAAATAAAATAGCCTGGTGAACTTAGTTCAAGACGAAATCCTCCCCACAAATGCAGGGAGGAAACAGAGGTGAATCAGATACCGACGCTAACCGTCTCCGGCAGTGTGCTGCCGCCatcaat > 2:552882/1‑143 (MQ=255) cTGCCCGGGGCCAAAATGACAAATAAAATAGCCTGGTGAACTTAGTTCAAGACGAAATCCTCCCCACAAATGCAGGGAGGAAACAGAGGTGAATCAGATACCGACGCTAACCGTCTCCGGCAGTGTGCTGCCGCCatcaatca > 2:106912/1‑143 (MQ=255) gggCCAAAATGACGAATAAAATAGCCTGGGGAACTTAGTGCAAGACGAAATCCTCCCCACAAATGCAGGGAGGAAACAGAGGTGAATCAGATACCGACGCTAACCGTATCCGGCAGTGTGCTGCCGCCATCAATCACATTCtg < 2:533570/143‑1 (MQ=255) aaTGCCAAATAAAATAGCCTGGTGAACTTAGTTCAAGACGAAAACCTCCCCACAAATGCAGGGAGGAAACAGAGGTGAATCAGATACCGACGCTAACACTCTCCGGCAGTGTGCTGCCGCCATCAATCACATTCTGTGTACCg < 2:662985/143‑1 (MQ=255) aataaaataGCCTGGTGAACTTAGTTCAAGACGAAATCCTCCCCACAAATGCAGGGAGGAAACAGAGGTGAATCAGATACCGACGCTAACCGCCTCCGGCAGTGTGCTGCCGCCATCAATCACATCCTGTGCACCAGCTAAAt > 2:298446/1‑143 (MQ=255) aaataGCCTGGTGAACTTAGTTCAAGACGAAATCCTCCCCACAAATGCAGGGAGGAAACAGAGGTGAATCAGATACCGACGCTAACCGTCTCCGGCAGTGTGCTGCCGCCATCAATCACATTCTGTGTACCGGTTAAATAGCt > 1:382171/1‑143 (MQ=255) taGCCTGGTGAACTTAGTTCAAGACGAAATCCTCCCCACAAATGCAGGGAGGAAACAGAGGTGAATCAGATACCGACGCTAACCGTCTCCGGCAGTGTGCTGCCGCCATCAATCACATTCTGTGTACCGGTTAAATAGCTGGa > 2:621540/1‑143 (MQ=255) gaCTTAGGTCAAGACGAAAGCCTCCCCACAGATGCAGGGAGGAAACAGAGGTGAATCAGATACCGACGCTAACCGTCTCCGGCAGTGTGCTGCCGCCATCAATCACATTCTGTGTACCGGTTAAATAGCTGGATTCATCCGAt < 2:374570/142‑1 (MQ=255) tatttCAAGACGAAAGCCCCCCCACAGATGCAGGGAGGAAACAGAGGTGAATCAGATACCGACGCTAACCGTCGCCGGCAGTGTGCTGCCGCCAGCAATCACATTCTGTGTACCGGTTAAATAGCTGGATTCATCCGATGCGa < 2:193595/140‑1 (MQ=255) aGACGAAATCCTCCCCACAAATGCAGGGAGGAAACAGAGGTGAATCAGCTACCGACGCTAACCGTCTCCGGCAGTGTGCTGCCGCCATCACTCACATTCTGTGTACCGGTTAGATAGCTGGCTTCCTCCGATGCGAGGACGgc > 2:107720/1‑143 (MQ=255) gACGAAATCCTCCCCACAAATGCAGGGAGGAAACAGAGGTGAATCAGATACCGACGCTAACCGTCTCCGGCAGTGTGCTGCCGCCATCAATCACATTCTGTGTACCGGTTAGATAGCTGGATTCATCCGATGCGAGGAAGgcc > 2:467532/1‑143 (MQ=255) aCGAAATCCTCCCCACAAATGCAGGGAGGAAACAGAGGTGAATCAGATACCGACGCTAACCATCTCCGGCAGTGTGCTGCCGCCATCAATCACATTCTGTGTACCGGTTAAATAGCTGGATTCATCCGATGCGAGGAAGgccg > 1:515814/1‑143 (MQ=255) cccccACAAATGCCGGGAGGAAAGAGAGGTGAATCAGATACCGACGCTAACCGTCTCCGGCAGTGTGCTGCCGCCATCAATCACATTCTGTGTACCGGTTAAATAGCTGGATTCATCCGATGCGAGGAAGGCCGCCAGTTCGc < 2:284180/142‑1 (MQ=255) gCAGGGAGGAAACAGAGGTGAATCAGATACCGACGCTAACCGTCTCCGGCAGTGTGCTGCCGCCATCAATCACATTCTGTGTACCGGTTAAATAGCTGGATTCATCCGATGCGAGGAAGGCCGCCAGTTCGCCGACTTCCAGc < 1:163604/143‑1 (MQ=255) gggAGGAAACAGAGGTGAATCAGATACCGACGCTAACCGTCTCCGGCAGTGTGCTGCCGCCATCAATCACATTCTGTGTACCGGTTAAATAGCTGGATTCATCCGATGCGAGGAAGGCCGCCAGTTCGCCGACTTCCAGCGGa > 1:394835/1‑143 (MQ=255) ggaggaAACAGAGGTGAATCAGATACCGACGCTAACCGTCTCCGGCAGTGTGCTGCCGCCATCAATCACATTCTGTGTACCGGTTAAATAGCTGGATTCATCCGCTGCGAGGAAGGCCGCCAGTTCGCCGACTTCCAGCGGAt > 1:143420/1‑143 (MQ=255) ggaggaAACAGAGGTGAATCAGATACCGACGCTAACCGTCTCCGGCAGTGTGCTGCCGCCATCAATCACATTCTGTGTACCGGTTAAATAGCTGGATTCATCCGATGCGCGGCATGCCGCCAGTTCGCCGACTTCCAGCGGAt > 1:121952/1‑143 (MQ=255) gaAACAGAGGTGAATCAGATACCGACGCTAACCGTCTCCGGCAGTGTGCTGCCGCCATCAATCACATTCTGTGTACCGGTTAAATAGCTGGATTCATCCGATGCGCGGAAGGCCGCCAGTTCGCCGACTTCCAGCGGATCggc > 1:491880/1‑143 (MQ=255) gTGAATCAGATACCGACGCTAACCGTCTCCGGCAGTGTGCTGCCGCCATCAATCACATTCTGTGTACCGGTTAAATAGCTGGATTCATCCGATGCGAGGAAGGCCGCCAGTTCGCCGACTTCCAGCGGATCGGCGAGGCGACg < 1:106912/143‑1 (MQ=255) aaTCAGATACCGACGCTAACCGTCTCCGGCAGTGTGCTGCCGCCATCAATCACATTCTGTGTACCGGTTAAATAGCTGGATTCATCCGATGCGAGGAAGGCCGCCAGTTCGCCGACTTCCAGCGGATCGGCGAGGCGACGCAt > 2:340209/1‑143 (MQ=255) aCCGTCTCCGGCAGTGTGctgccggagacggttagcgtcggtatctgattcacctctgtttcctccct > 1:379548‑M2/1‑18 (MQ=255) aCCGTCTCCGGCAGTGTGctgccggagacggttagcgtcggtatctgattcacctctgtttcctccct < 2:379548‑M2/68‑51 (MQ=255) tctcCGGCAGTGTGctgccggagacggttagcgtcggtatctggttcacctctgtttcctccctgcatttgtggggaggatttcgtcttgaactaagttcaccaggctattttatttgtcattttggccccgggcagtgctcg < 1:264548‑M2/143‑130 (MQ=255) ccGGCAGTGTGCTGCCGCCATCAATCACATTCTGTGTACCGGTTAAATAGCTGGATTCATCCGATGCGAGGAAGGCCGCCAGTTCGCCGACTGCCAGCGGATCGGCGAGGCGACGCATCGGGATTGCTTTCGCCATTtcagtc < 1:370393/143‑1 (MQ=255) | AGGATTTCGAGCACTGCCCGGGGCCAAAATGACAAATAAAATAGCCTGGTGAACTTAGTTCAAGACGAAATCCTCCCCACAAATGCAGGGAGGAAACAGAGGTGAATCAGATACCGACGCTAACCGTCTCCGGCAGTGTGCTGCCGCCATCAATCACATTCTGTGTACCGGTTAAATAGCTGGATTCATCCGATGCGAGGAAGGCCGCCAGTTCGCCGACTTCCAGCGGATCGGCGAGGCGACGCATCGGGATTGCTTTCGCCATTTCAGTC > NC_000913/2543726‑2543997 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |