Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 2,596,873 Δ1 bp 6.4% intergenic (‑136/+32) ypfJ ← / ← purC uncharacterized protein YpfJ/phosphoribosylaminoimidazole‑succinocarboxamide synthase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,596,8730C. 6.4% 167.8 / 7.3 62intergenic (‑136/+32)ypfJ/purCuncharacterized protein YpfJ/phosphoribosylaminoimidazole‑succinocarboxamide synthase
Reads supporting (aligned to +/- strand):  ref base C (30/28);  new base . (2/2);  total (32/30)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.66e-01

GATACCTCAACAATATATTCATTATAGAAATGATCGTAGGTGGTTCAGAGGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGGTCTTTGTCCATTTTCTCCAGCGTTTCTTT  >  NC_000913/2596739‑2597012
                                                                                                                                      |                                                                                                                                            
gATACCTCAACAATATATTCATTATAGAAATGATCGTAGGTGGTTCAGAGGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCa                                                                                                                                     <  1:387469/143‑1 (MQ=255)
  tACCTCAACAATATATTCATTATAGAAATGATCGTAGGTGGTTCAGAGGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACg                                                                                                                                   <  1:969504/143‑1 (MQ=255)
   aCCTCAACAATATATTCATTATAGAAATGATCGTAGGTGGTTCAGAGGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACgg                                                                                                                                  >  1:81488/1‑143 (MQ=255)
     cTCAACAATATATTCATTATAGAAATGATCGTAGGTGGTTCAGAGGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCa                                                                                                                                >  1:814347/1‑143 (MQ=255)
      tCAACAATATATTCATTATAGAAATGATCGTAGGTGGTTCAGAGGAAGATTACCACAGGAAAGCGGGTTGAAATGGCGGAGGATTGAGCGTTCAATGCATATATTCGGAGAGCGGTTGTCTTGCCTCGCACGCTGCACGGCaa                                                                                                                               >  2:820374/1‑143 (MQ=255)
      tCAACAATATATTCATTATAGAAATGATCGTAGGTGGTTCAGAGGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCAGCTGGCACGGCaa                                                                                                                               <  1:758491/143‑1 (MQ=255)
              atatTCATTATAGAAATGATCGTAGGTGGTTCAGAGGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCAGCTGGCACGGCaa                                                                                                                               >  1:876016/1‑135 (MQ=255)
              atatTCATTATAGAAAGGATCGTAGGTGGTTCAGAGGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCAGCTGGCACGGCaa                                                                                                                               <  2:876016/135‑1 (MQ=255)
                atTCATTATAGAAATGATCGTAGGTGGTTCAGAGGAAGATTACAACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGCTGTCTTGCTGGTCCCGCTGCAACGCAAGATGATGCAc                                                                                                                     >  2:196330/1‑143 (MQ=255)
                 ttCATTATAGAAATGATCGTAGGTGGTTCAGAGGAAGATTACCACAGGAAAGCGGGGTGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACa                                                                                                                    >  2:1206358/1‑143 (MQ=255)
                 ttCATTATAGAAATGATCGTAGGTGGTTCAGAGGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACa                                                                                                                    >  1:220059/1‑143 (MQ=255)
                  tCATTATAGAAATGATCGTAGGTGGTTCAGAGGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAg                                                                                                                   >  2:530121/1‑143 (MQ=255)
                    aTTAGAGAAATGATCGTAGGTGGTTCAGAGTAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGaa                                                                                                                 <  1:252508/143‑1 (MQ=255)
                     ttATAGAAATGATCGTAGGTGGTTCAGAGGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGaaa                                                                                                                >  1:228799/1‑143 (MQ=255)
                       ataGAAATGATCGTAGGTGGTTCAGAGGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATTTATTCCGAGAGCGGGTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGaaaaa                                                                                                              >  1:932051/1‑143 (MQ=255)
                          gAAATGATTGTAGTTGGGTGAGAGGAAGATAAGCACCGGAAAGCGGGATGAAAGGGCGGAGGAATGAGCGTTCAATGCATATACTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCa                                                                                                           <  1:295252/143‑1 (MQ=255)
                            aaTGATCGTAGGTGGTTCAGAGGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGt                                                                                                         >  2:812730/1‑143 (MQ=255)
                                   gTAGGTGGTTCAGAGGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATCTTCCGAGAGCGGTTGTGTTGCCGTGCCAACTGCACGGCCAGATGAGGAACAGAAAAATAAGTACAGCTg                                                                                                  >  2:265860/1‑143 (MQ=255)
                                          gtTCAGAGGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTGCAATGCACATATTCCGCCAGCGGTTGTTTTGCTGTGCCAGGTGCACGGCAAGATGATGCACAGAAAAATGAGTGCAGCGGTACAccc                                                                                           >  1:1272449/1‑143 (MQ=255)
                                           ttCAGAGGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCa                                                                                          <  1:465340/143‑1 (MQ=255)
                                            gcAGAGGTATATCACATCAGGAAAGCGTGATGAAATGGCGGAGTGATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGGGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAg                                                                                         <  2:677934/142‑1 (MQ=255)
                                              agagGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAggc                                                                                       <  1:960589/143‑1 (MQ=255)
                                                agGAAGATTACCACGGGAAAGCGGGAGGGAATGGCGGAGGAATGAGCGGTCAATGCATATAGTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGAACACCCAggcgt                                                                                     <  2:520360/143‑2 (MQ=255)
                                                 ggAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGACAAATCAGTCCAGCTGTACACCCAggcggc                                                                                    >  1:965655/1‑143 (MQ=255)
                                                 ggAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAggcggc                                                                                    >  1:963987/1‑143 (MQ=255)
                                                   aaGATGACCACAGGAAAGCGGGAGGGGATGGCGGAGGAATGACCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGcggcgg                                                                                  <  1:228043/143‑1 (MQ=255)
                                                    aagttACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCggcggg                                                                                 <  2:1228214/140‑1 (MQ=255)
                                                    aGACTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAGTGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCggcggg                                                                                 <  2:287633/143‑1 (MQ=255)
                                                            acaGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCt                                                                         >  1:1180725/1‑143 (MQ=255)
                                                                  aaGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAg                                                                   <  1:812730/143‑1 (MQ=255)
                                                                          tGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGAt                                                           <  2:677200/143‑1 (MQ=255)
                                                                            aaaTGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCGGGAGGCGGGCGACGGCTTCATAGGCTTCGATCa                                                         <  1:486257/143‑1 (MQ=255)
                                                                             aaTGGCGGAGGCACGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAg                                                        <  1:852203/143‑1 (MQ=255)
                                                                               gggCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGGGGTCTTGCCGTGCCAGCTGCACGGCAAGATGCTGAACAAAAAACTCAGTCCAGCTGTACACGCCGGCCGCGGGCCACGGCTACATGGGCTCCGCTcgcgc                                                      >  2:678510/2‑139 (MQ=255)
                                                                                  cGGGGGAGTGAGCGGTCAATGCATATATGCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCAc                                                   <  2:220059/143‑1 (MQ=255)
                                                                                  cGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCAc                                                   >  1:369714/1‑143 (MQ=255)
                                                                                  cGGAGGAATGAGCGTTCAATGCACATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGAAAGCTGATGAACAGAAAAATCCGCCCAGCTGTACACCCAGGCGGCGGCCGACGGCCTCATAGGCATCGATCAGGcccg                                                   >  2:1264614/1‑141 (MQ=255)
                                                                                           gAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCACGCGGCGGGCGACGGCTTCATAGGCTTCGAACAGACCACCGAGGctca                                          >  2:993795/1‑142 (MQ=255)
                                                                                            aGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGCACAGAAGAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGACCATGCCACCGAGGCTCTg                                         >  1:199577/1‑143 (MQ=255)
                                                                                            aGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACCGAAACCTCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCCTCATAGGCTTCGAACAGCCCACCGCGGctcag                                         >  2:9426/1‑141 (MQ=255)
                                                                                               gTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCg                                      <  1:503946/143‑1 (MQ=255)
                                                                                                ttCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCgg                                     >  1:997118/1‑143 (MQ=255)
                                                                                                   aaTGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGaaa                                  <  1:622803/143‑1 (MQ=255)
                                                                                                   aaTGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATCAACAGAAAAATCAGTCCAGCTGTACACCCAGCCGGCGGGCGACGGCTCCATACGCTTCGAGCACGCCACCGAGGCCCTGCCAGaac                                  >  2:944918/1‑142 (MQ=255)
                                                                                                    aTGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAAc                                 <  1:1192382/143‑1 (MQ=255)
                                                                                                       cATACATTCCGAGTGCGGGTGTCTTGCCGTGCTAGCTGCACGGCAAGATGATGAAAAGAAAAGTCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGAGCAGGCCACCGAGGCTCTGGCGGAAACGGt                              <  2:1006459/143‑1 (MQ=255)
                                                                                                         tatatTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCAGCGAGGCGCCGGCGGAAACGGTcc                            >  2:998323/1‑142 (MQ=255)
                                                                                                         tatatTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGGTCt                            <  2:81488/143‑1 (MQ=255)
                                                                                                         tatatTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGGTCt                            <  1:573417/143‑1 (MQ=255)
                                                                                                           tatTCCGAGAGCGGTTGTCTTGCCGTGCCATCGGCACAGCAAAATGATCAACATAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGGTCttt                          <  2:205989/143‑1 (MQ=255)
                                                                                                                 gagaGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGGTCTTTGTCCAt                    >  2:897755/1‑143 (MQ=255)
                                                                                                                   gagCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGGTCTTTGTCCAttt                  <  1:897755/143‑1 (MQ=255)
                                                                                                                      gttttGTCGTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTATACACCCAGGCGTCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGCGGCTCTGGCCGAAACGGTCTTTGTCCATTTtct               <  2:1120600/140‑1 (MQ=255)
                                                                                                                      cGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGACACGGTCTTTGTCCAtctcct               >  2:299663/1‑138 (MQ=255)
                                                                                                                       ggTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGGACAGAAAAATCCGTACAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGGTCTTTGTCCATTTtctc              <  2:975571/143‑1 (MQ=255)
                                                                                                                         ttGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGGTCTTTGTCCCTTTTCTCCa            >  1:467257/1‑143 (MQ=255)
                                                                                                                         ttGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCGCTGGCGGACACGGCATTTGGCCATTTTCTCCa            >  1:282847/1‑143 (MQ=255)
                                                                                                                              ttGCCGTGCAGCTGGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGGTCCTTGTCCATTTTCTCCAGCGtt       >  1:223833/1‑143 (MQ=255)
                                                                                                                               tGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCAACCGAGCCTCTGGCGGAAACGGTATTTATCCATTTTCTCCAGCGatt      >  1:750295/1‑143 (MQ=255)
                                                                                                                                 ccGTGCCAGCTGCACGGCAAGATGCTGAACAGAAAACTCAGCCCAGCTGAACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGGTCTTTGTCCATTTTCTCCAGCGTTCCt    >  1:1043229/1‑143 (MQ=255)
                                                                                                                                   gcgCCAGCTGCACGGCAAGACGATCAACAGCAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGGTCTTTGTCCATTTTCTCCAGCGTTTCttt  <  1:40941/141‑1 (MQ=255)
                                                                                                                                   gTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGGTCTTTGTCCATTTTCTCCAGCGTTTCttt  <  1:522227/143‑1 (MQ=255)
                                                                                                                                      |                                                                                                                                            
GATACCTCAACAATATATTCATTATAGAAATGATCGTAGGTGGTTCAGAGGAAGATTACCACAGGAAAGCGGGATGAAATGGCGGAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATCAGGCCACCGAGGCTCTGGCGGAAACGGTCTTTGTCCATTTTCTCCAGCGTTTCTTT  >  NC_000913/2596739‑2597012

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: